| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225631010
Identifier: 225631010
GI number: 225631010
Start: 1426082
End: 1426678
Strand: Reverse
Name: 225631010
Synonym: WRi_013380
Alternate gene names: NA
Gene position: 1426678-1426082 (Counterclockwise)
Preceding gene: 225631011
Following gene: 225631005
Centisome position: 98.67
GC content: 36.35
Gene sequence:
>597_bases ATGTCATTCACAGAAATTAGATTTCCAGAAAATATATCTTATGGTTCCGCTGGAGGACCGGAATTTTCCACTGACGTTGT AACAACTCATAACGGTTGTGAACAGCGCAACATCAATTGGTCTCATGCACGCACTAGATACAACATAGCTTACGGGGTCA GATCAAACGAGCAGCTACTAGAACTAATAACATTTTTTCATGCACGAAAAGGTAAAGCAATAGGGTTTCGTTTTAAGGAT TGGTCGGATTTTATAGCCATTAATCAAGAGATTGGTATAGGAGATAACAAAAAAACGACTTTTCAGCTAATCAAAACTTA TGTAAGTGGGGAAGATAAGCATATACGTATGATCAAAAAGCCAGTACATGGGACAGTAAAGATTTATTTAAATGGTAAAG AAGAGAGTGAATATTCAGTAAATTATTCAACGGGAGAAATAACATTCATGAAACCGCCAGTAAAAGATGTGATAATCACT GCGAGCTTTGAATTTGATGTGCCCGTACGCTTTGATACAGATTACTTAAACGCTTCGATTGATGACTATGGAAGCAATAG CTGGAATAACATTCCACTAATAGAGGTAAAATTTTAG
Upstream 100 bases:
>100_bases GTAGTCTCATCCACTTTCCATAGCGTCATTTACTATGTGAAACGCTTTCAAATTACAACATTTTCTTCAACCAAACTATT TTACTTTCACAGGAGGGTAT
Downstream 100 bases:
>100_bases TTATAAGCGAGCATAGATCTACATCATAGTAGGGCTACCATAAATTGAAAAAATTAAGCACCACTGAGGCTCTATACCTA AATGAGCCTCAGTATATGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MSFTEIRFPENISYGSAGGPEFSTDVVTTHNGCEQRNINWSHARTRYNIAYGVRSNEQLLELITFFHARKGKAIGFRFKD WSDFIAINQEIGIGDNKKTTFQLIKTYVSGEDKHIRMIKKPVHGTVKIYLNGKEESEYSVNYSTGEITFMKPPVKDVIIT ASFEFDVPVRFDTDYLNASIDDYGSNSWNNIPLIEVKF
Sequences:
>Translated_198_residues MSFTEIRFPENISYGSAGGPEFSTDVVTTHNGCEQRNINWSHARTRYNIAYGVRSNEQLLELITFFHARKGKAIGFRFKD WSDFIAINQEIGIGDNKKTTFQLIKTYVSGEDKHIRMIKKPVHGTVKIYLNGKEESEYSVNYSTGEITFMKPPVKDVIIT ASFEFDVPVRFDTDYLNASIDDYGSNSWNNIPLIEVKF >Mature_197_residues SFTEIRFPENISYGSAGGPEFSTDVVTTHNGCEQRNINWSHARTRYNIAYGVRSNEQLLELITFFHARKGKAIGFRFKDW SDFIAINQEIGIGDNKKTTFQLIKTYVSGEDKHIRMIKKPVHGTVKIYLNGKEESEYSVNYSTGEITFMKPPVKDVIITA SFEFDVPVRFDTDYLNASIDDYGSNSWNNIPLIEVKF
Specific function: Unknown
COG id: COG5448
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22686; Mature: 22555
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFTEIRFPENISYGSAGGPEFSTDVVTTHNGCEQRNINWSHARTRYNIAYGVRSNEQLL CCCCEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHCEEEEEEEEECCCCHHHH ELITFFHARKGKAIGFRFKDWSDFIAINQEIGIGDNKKTTFQLIKTYVSGEDKHIRMIKK HHHHHHHHCCCCEEEEEECCCCCEEEEECEECCCCCCHHHHHHHHHHHCCCCCEEEEEEC PVHGTVKIYLNGKEESEYSVNYSTGEITFMKPPVKDVIITASFEFDVPVRFDTDYLNASI CCCEEEEEEECCCCCCEEEEEECCCEEEEECCCCCCEEEEEEEEECCEEEECCHHHCCCC DDYGSNSWNNIPLIEVKF CCCCCCCCCCCCEEEEEC >Mature Secondary Structure SFTEIRFPENISYGSAGGPEFSTDVVTTHNGCEQRNINWSHARTRYNIAYGVRSNEQLL CCCEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHCEEEEEEEEECCCCHHHH ELITFFHARKGKAIGFRFKDWSDFIAINQEIGIGDNKKTTFQLIKTYVSGEDKHIRMIKK HHHHHHHHCCCCEEEEEECCCCCEEEEECEECCCCCCHHHHHHHHHHHCCCCCEEEEEEC PVHGTVKIYLNGKEESEYSVNYSTGEITFMKPPVKDVIITASFEFDVPVRFDTDYLNASI CCCEEEEEEECCCCCCEEEEEECCCEEEEECCCCCCEEEEEEEEECCEEEECCHHHCCCC DDYGSNSWNNIPLIEVKF CCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA