Definition Wolbachia sp. wRi, complete genome.
Accession NC_012416
Length 1,445,873

Click here to switch to the map view.

The map label for this gene is 225631005

Identifier: 225631005

GI number: 225631005

Start: 1418357

End: 1418653

Strand: Reverse

Name: 225631005

Synonym: WRi_013330

Alternate gene names: NA

Gene position: 1418653-1418357 (Counterclockwise)

Preceding gene: 225631010

Following gene: 225631004

Centisome position: 98.12

GC content: 30.64

Gene sequence:

>297_bases
ATGGAAATAATATCGTTAAATAACTTAGACAGTGCAGGAATAAAAACAAAGTTGCTTTATATAATAAATAAAATTGTAGA
AAAAAATGCTTGGACTCAGGCTTTTGCAGCTGAGAAACTTGGTATTGATCAGCCAAAGGTATCGCAAATTAAAAATGGTA
AAATAGATGGTTTTTCTTTAGAGCGATTGTTAGGATTTCTAAAAAAACTTGATCATGAGATAACAATCACGATGACAGAA
AGCCAAGAAATAAAATCTGAGGCAGAAAAAGTAAAACATGAAGTTGAATCGCAATAG

Upstream 100 bases:

>100_bases
CATATAATTATTGACAAGTTACATGATATTAATATCTTGGTATATTAAATATTATGTTATAATATTTAATAAAGTTAATT
GATATGTGAGTGTAAGAATT

Downstream 100 bases:

>100_bases
ATACAAAGTTGACAACTTGTTTTTTGTGATATAGTATAAAACTTATTAAGGTAGTATCTTATGGCTGAGTCTATTGTAGA
AAAGTGTATAGAACGGGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MEIISLNNLDSAGIKTKLLYIINKIVEKNAWTQAFAAEKLGIDQPKVSQIKNGKIDGFSLERLLGFLKKLDHEITITMTE
SQEIKSEAEKVKHEVESQ

Sequences:

>Translated_98_residues
MEIISLNNLDSAGIKTKLLYIINKIVEKNAWTQAFAAEKLGIDQPKVSQIKNGKIDGFSLERLLGFLKKLDHEITITMTE
SQEIKSEAEKVKHEVESQ
>Mature_98_residues
MEIISLNNLDSAGIKTKLLYIINKIVEKNAWTQAFAAEKLGIDQPKVSQIKNGKIDGFSLERLLGFLKKLDHEITITMTE
SQEIKSEAEKVKHEVESQ

Specific function: Unknown

COG id: COG5606

COG function: function code S; Uncharacterized conserved small protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11070; Mature: 11070

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIISLNNLDSAGIKTKLLYIINKIVEKNAWTQAFAAEKLGIDQPKVSQIKNGKIDGFSL
CCEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCH
ERLLGFLKKLDHEITITMTESQEIKSEAEKVKHEVESQ
HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEIISLNNLDSAGIKTKLLYIINKIVEKNAWTQAFAAEKLGIDQPKVSQIKNGKIDGFSL
CCEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCH
ERLLGFLKKLDHEITITMTESQEIKSEAEKVKHEVESQ
HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA