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The map label for this gene is ycfF [C]

Identifier: 225630976

GI number: 225630976

Start: 1384235

End: 1384603

Strand: Reverse

Name: ycfF [C]

Synonym: WRi_012980

Alternate gene names: 225630976

Gene position: 1384603-1384235 (Counterclockwise)

Preceding gene: 225630977

Following gene: 225630975

Centisome position: 95.76

GC content: 33.33

Gene sequence:

>369_bases
ATGAGCAATGAAGTTTATGATAGCGATAACATCTTTGCTCAAATATTAAGAGGTGAGTTACCTTGTGAGAAGGTACATGA
AAATGAAAATGTACTAGCTTTTCATGATAAGTACCCTGACGCACCAGTTCACATTTTAGCTATACCCAAAAATCAATATA
TTTCATACGATGATTTTATTCTAAAAGCTTCTGAAGAGGAGATAGCAAATTTCTTCAAAACTGTAAGAGAGATAGCACAT
AAATATAATCTAGAAAAAACAGGGTATAGGTTAGTCACTAACTACGGTGAAAATGGAGAGCAGGTTGTACCACATTTTCA
CGTGCATATTTTAGGTGGTAAAAAGTTAGGAAAGCATGTAAATTCATAG

Upstream 100 bases:

>100_bases
CTCTTTAAATCTTGAAGATGCTTCTGGTGAAGCGATAAAACCACTATCTACACCTAATGTAGAGAAAAACGAAGAAAGAG
GGAAAGGTCGCTCTTAAAAT

Downstream 100 bases:

>100_bases
TGTTATATGTTTTGTTAAATGAGCGAATATTTAACCATAGTAATCTTTATCTGCGTATCAATTGTAGTATCTTTTGTTTT
AGGTATATTGCCTATGTTTC

Product: HIT family protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MSNEVYDSDNIFAQILRGELPCEKVHENENVLAFHDKYPDAPVHILAIPKNQYISYDDFILKASEEEIANFFKTVREIAH
KYNLEKTGYRLVTNYGENGEQVVPHFHVHILGGKKLGKHVNS

Sequences:

>Translated_122_residues
MSNEVYDSDNIFAQILRGELPCEKVHENENVLAFHDKYPDAPVHILAIPKNQYISYDDFILKASEEEIANFFKTVREIAH
KYNLEKTGYRLVTNYGENGEQVVPHFHVHILGGKKLGKHVNS
>Mature_121_residues
SNEVYDSDNIFAQILRGELPCEKVHENENVLAFHDKYPDAPVHILAIPKNQYISYDDFILKASEEEIANFFKTVREIAHK
YNLEKTGYRLVTNYGENGEQVVPHFHVHILGGKKLGKHVNS

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI4885413, Length=109, Percent_Identity=38.5321100917431, Blast_Score=81, Evalue=2e-16,
Organism=Homo sapiens, GI14211923, Length=112, Percent_Identity=37.5, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI1787346, Length=109, Percent_Identity=35.7798165137615, Blast_Score=70, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17506713, Length=116, Percent_Identity=35.3448275862069, Blast_Score=85, Evalue=7e-18,
Organism=Drosophila melanogaster, GI28574010, Length=123, Percent_Identity=36.5853658536585, Blast_Score=85, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24581222, Length=123, Percent_Identity=36.5853658536585, Blast_Score=85, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 14040; Mature: 13909

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNEVYDSDNIFAQILRGELPCEKVHENENVLAFHDKYPDAPVHILAIPKNQYISYDDFI
CCCCCCCCHHHHHHHHHCCCCHHHHCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCEE
LKASEEEIANFFKTVREIAHKYNLEKTGYRLVTNYGENGEQVVPHFHVHILGGKKLGKHV
EECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEECCEEEEEEECCHHHCCCC
NS
CC
>Mature Secondary Structure 
SNEVYDSDNIFAQILRGELPCEKVHENENVLAFHDKYPDAPVHILAIPKNQYISYDDFI
CCCCCCCHHHHHHHHHCCCCHHHHCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCEE
LKASEEEIANFFKTVREIAHKYNLEKTGYRLVTNYGENGEQVVPHFHVHILGGKKLGKHV
EECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEECCEEEEEEECCHHHCCCC
NS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2664449; 1472710 [H]