Click here to switch to the map view.

The map label for this gene is 225630942

Identifier: 225630942

GI number: 225630942

Start: 1354001

End: 1355434

Strand: Reverse

Name: 225630942

Synonym: WRi_012640

Alternate gene names: NA

Gene position: 1355434-1354001 (Counterclockwise)

Preceding gene: 225630943

Following gene: 225630941

Centisome position: 93.75

GC content: 41.49

Gene sequence:

>1434_bases
ATGATGTTATTGAAATCATTCAAACAATTATTTCGGAAACCAACAAAACCAAAAAGTTCAGCATGGGATGCGTCAGGCTC
AGGAAGGAGATTATTGCACTTTCAACCAGAGACAGGAAGTATAAATAGCTTACTCTCGCATAGTCTTGAAACTTTAAGAA
GTCGATCACGTGACATGGTAAGAAAGAACTCCTATGCAGCAAACATCATCGATACGATAGTGAGTAATTGCGTTGGGACA
GGAATAAAACCGCAGTCAAAGGCGAAAGATGCAGAATTTCGGAAAAAAGTGCAAGAATTATGGCTGAGATGGACAGATGA
AGCAGACAGTAGCGGAGTAAGTGATTTTTATGGATTACAAACTCTAGTATGTAGAAGCATGATAGAAGGAGGAGAATGTT
TTGTAAGACTCCGAACAAGAAAACGAGAAGATGGACTTTGTGTGCCGTTGCAACTGCAAGTACTTGAATCAGAGCATTTA
GATAATAAGAGCAATCAAACCCTTGCCAACGGTAATGTAATTAGAAACGGCATTGAGTTCAATAGACTTGGGCAGAGGGA
AGCATACTACCTATTTAGAGAACATCCGGGTGAAGGATCATTTGGAGAGTCAGTGAGAGTACCAGCAAATGATGTTTTAC
ATATCTATAGACCACTAAGACCTGGGCAGATTCGAGGAGTACCATGGTTGTCCAGTGTACTGTTAAAGCTCTATGAACTT
GATCAATACGATGATGCGGAGCTGGTAAGAAAGAAGACAGCAGCGATGTTTGCGGGATTTATTACCAGACTTGATCCTGA
AGCGAACATCATGGGAGAAGGAGAGAGTAATGAACATGGAGTAGTGCTGTCTGGCTTAGAACCTGGGACTATGCAATTAC
TTGATCCCGGAGAAGATATTAAGTTCTCGGAACCATCAGACGTTGGGGGAAGTTATGAAGCATTCATGAAACAGCAGCTT
AGGGCAATAGCAGTAGGCACAGGGATAACTTACGAGCAGCTAACAGGAGATCTAAGTGGTGTCAATTATTCATCAATAAG
AGCTGGGTTAATAGAGTTTCGTAGGAAGTGCGCGATGTTACAGCATAACGTGGTAGTATTTCAGCTTTGCCGTCCAGTAT
GGGATAGGTGGCTAGAATTAGCAATACTATCTGGAGAACTGGACATAGGTGAAAATTGGGCAAAAGAAACAGCAAAAGAG
GTAAAATGGATACCGCAAGGGTGTGCTTACGTAGATCCGCTAAAAGACCAGCAAGCACAGCAAATGGCGGTAAGGAATGG
GTTTAAAAGCAGGTCAGAAGTAGTATCAGAGCTAGGTTACGATATAGAAGAAATCGACCAAGAAATTGCTGAAGATCAAA
GGCGTGCTAGTGAATTGGGTTTAAGTTTTGACTCGGACGTCAGTAGTTTTGATTCTAATACGGAAATAATATAA

Upstream 100 bases:

>100_bases
GTAAAACAGGTCCTAAACCAAATTCAGTAGAAGGCATAGGACCATGCGATAGGAACAAATTCAACGGAACATTAGAAGAA
TTAAAAGATTTTTGGATATC

Downstream 100 bases:

>100_bases
GTGAGCTGGCTCAATAAACCGATGATGATAGAGCAAAGAAGCTTTGATTTATTGTCATTACATGCAGAGAAGCATCCAAC
GTTTAAAAATATAAAACATG

Product: portal protein, lambda family

Products: NA

Alternate protein names: Lambda Family Phage Portal Protein; Phage Portal Protein; Phage Portal Protein Lambda; Portal Protein; Bacteriophage Capsid Protein; Portal Protein Lambda Family; Phage Portal Protein Lambda Family Protein; Phage-Related Portal Protein; Phage Portal Protein Of Lambda Family; Portal Protein B; Portal Protein Putative Prophage; Bacteriophage-Related Protein; Capsid Protein Of Prophage; Prophage; Head-Tail Preconnector Protein Phage Origin; Portal Protein GPB Of Phage Lambda; Phage Capsid Protein; Gifsy-2 Prophage VmtV; Head Portal Protein; Phage Protein Gp

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MMLLKSFKQLFRKPTKPKSSAWDASGSGRRLLHFQPETGSINSLLSHSLETLRSRSRDMVRKNSYAANIIDTIVSNCVGT
GIKPQSKAKDAEFRKKVQELWLRWTDEADSSGVSDFYGLQTLVCRSMIEGGECFVRLRTRKREDGLCVPLQLQVLESEHL
DNKSNQTLANGNVIRNGIEFNRLGQREAYYLFREHPGEGSFGESVRVPANDVLHIYRPLRPGQIRGVPWLSSVLLKLYEL
DQYDDAELVRKKTAAMFAGFITRLDPEANIMGEGESNEHGVVLSGLEPGTMQLLDPGEDIKFSEPSDVGGSYEAFMKQQL
RAIAVGTGITYEQLTGDLSGVNYSSIRAGLIEFRRKCAMLQHNVVVFQLCRPVWDRWLELAILSGELDIGENWAKETAKE
VKWIPQGCAYVDPLKDQQAQQMAVRNGFKSRSEVVSELGYDIEEIDQEIAEDQRRASELGLSFDSDVSSFDSNTEII

Sequences:

>Translated_477_residues
MMLLKSFKQLFRKPTKPKSSAWDASGSGRRLLHFQPETGSINSLLSHSLETLRSRSRDMVRKNSYAANIIDTIVSNCVGT
GIKPQSKAKDAEFRKKVQELWLRWTDEADSSGVSDFYGLQTLVCRSMIEGGECFVRLRTRKREDGLCVPLQLQVLESEHL
DNKSNQTLANGNVIRNGIEFNRLGQREAYYLFREHPGEGSFGESVRVPANDVLHIYRPLRPGQIRGVPWLSSVLLKLYEL
DQYDDAELVRKKTAAMFAGFITRLDPEANIMGEGESNEHGVVLSGLEPGTMQLLDPGEDIKFSEPSDVGGSYEAFMKQQL
RAIAVGTGITYEQLTGDLSGVNYSSIRAGLIEFRRKCAMLQHNVVVFQLCRPVWDRWLELAILSGELDIGENWAKETAKE
VKWIPQGCAYVDPLKDQQAQQMAVRNGFKSRSEVVSELGYDIEEIDQEIAEDQRRASELGLSFDSDVSSFDSNTEII
>Mature_477_residues
MMLLKSFKQLFRKPTKPKSSAWDASGSGRRLLHFQPETGSINSLLSHSLETLRSRSRDMVRKNSYAANIIDTIVSNCVGT
GIKPQSKAKDAEFRKKVQELWLRWTDEADSSGVSDFYGLQTLVCRSMIEGGECFVRLRTRKREDGLCVPLQLQVLESEHL
DNKSNQTLANGNVIRNGIEFNRLGQREAYYLFREHPGEGSFGESVRVPANDVLHIYRPLRPGQIRGVPWLSSVLLKLYEL
DQYDDAELVRKKTAAMFAGFITRLDPEANIMGEGESNEHGVVLSGLEPGTMQLLDPGEDIKFSEPSDVGGSYEAFMKQQL
RAIAVGTGITYEQLTGDLSGVNYSSIRAGLIEFRRKCAMLQHNVVVFQLCRPVWDRWLELAILSGELDIGENWAKETAKE
VKWIPQGCAYVDPLKDQQAQQMAVRNGFKSRSEVVSELGYDIEEIDQEIAEDQRRASELGLSFDSDVSSFDSNTEII

Specific function: Unknown

COG id: COG5511

COG function: function code R; Bacteriophage capsid protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53644; Mature: 53644

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLLKSFKQLFRKPTKPKSSAWDASGSGRRLLHFQPETGSINSLLSHSLETLRSRSRDMV
CHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
RKNSYAANIIDTIVSNCVGTGIKPQSKAKDAEFRKKVQELWLRWTDEADSSGVSDFYGLQ
HHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
TLVCRSMIEGGECFVRLRTRKREDGLCVPLQLQVLESEHLDNKSNQTLANGNVIRNGIEF
HHHHHHHHCCCCEEEEEECCCCCCCCEEEHHHHHHHHHHCCCCCCCEECCCCHHCCCCCH
NRLGQREAYYLFREHPGEGSFGESVRVPANDVLHIYRPLRPGQIRGVPWLSSVLLKLYEL
HHCCCHHHEEEEEECCCCCCCCCCEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHC
DQYDDAELVRKKTAAMFAGFITRLDPEANIMGEGESNEHGVVLSGLEPGTMQLLDPGEDI
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEECCCCCCEEEECCCCCC
KFSEPSDVGGSYEAFMKQQLRAIAVGTGITYEQLTGDLSGVNYSSIRAGLIEFRRKCAML
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
QHNVVVFQLCRPVWDRWLELAILSGELDIGENWAKETAKEVKWIPQGCAYVDPLKDQQAQ
HCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
QMAVRNGFKSRSEVVSELGYDIEEIDQEIAEDQRRASELGLSFDSDVSSFDSNTEII
HHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCC
>Mature Secondary Structure
MMLLKSFKQLFRKPTKPKSSAWDASGSGRRLLHFQPETGSINSLLSHSLETLRSRSRDMV
CHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
RKNSYAANIIDTIVSNCVGTGIKPQSKAKDAEFRKKVQELWLRWTDEADSSGVSDFYGLQ
HHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
TLVCRSMIEGGECFVRLRTRKREDGLCVPLQLQVLESEHLDNKSNQTLANGNVIRNGIEF
HHHHHHHHCCCCEEEEEECCCCCCCCEEEHHHHHHHHHHCCCCCCCEECCCCHHCCCCCH
NRLGQREAYYLFREHPGEGSFGESVRVPANDVLHIYRPLRPGQIRGVPWLSSVLLKLYEL
HHCCCHHHEEEEEECCCCCCCCCCEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHC
DQYDDAELVRKKTAAMFAGFITRLDPEANIMGEGESNEHGVVLSGLEPGTMQLLDPGEDI
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEECCCCCCEEEECCCCCC
KFSEPSDVGGSYEAFMKQQLRAIAVGTGITYEQLTGDLSGVNYSSIRAGLIEFRRKCAML
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
QHNVVVFQLCRPVWDRWLELAILSGELDIGENWAKETAKEVKWIPQGCAYVDPLKDQQAQ
HCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
QMAVRNGFKSRSEVVSELGYDIEEIDQEIAEDQRRASELGLSFDSDVSSFDSNTEII
HHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA