| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630938
Identifier: 225630938
GI number: 225630938
Start: 1349851
End: 1350852
Strand: Reverse
Name: 225630938
Synonym: WRi_012600
Alternate gene names: NA
Gene position: 1350852-1349851 (Counterclockwise)
Preceding gene: 225630939
Following gene: 225630937
Centisome position: 93.43
GC content: 41.32
Gene sequence:
>1002_bases ATGCAAAATCCATTTACAAATCCAGCATTTAGTATGACGGAATTAACTAAAGCAATAAACATATTGCCGATAAATTATGG TCGAACAGAAAGCTTAAATTTATTTCCAAGTAGATCGGTAAGATTTCGACATATTACAATAGAAGAGCAAAACGGAGTAT TGAGTTTATTACCAACGCAAGTTCCCGGAGCACCAGCAACAGTGGGAAAACGCGGAAAACGAAAAATAAGAACATTTACG ATACCACATATTCCCCATGATGACGTAGTGTTACCTGAGGAAGTGCAAGGAATAAGGGCATTTGGGTCAGAGAATGAACT GAAAGCATTGGCTAACGTGGTAACAGATCATCTAGAATTGATGAGAAACAAGCACGCGATAACGTTAGAACATTTGCGAA TGGGGGCGCTCAAAGGGATTATTCTGGATGCTGATGGCAGTGAGTTATTAAACCTTTACAACGAATTTGAAATTACGCCA AAAGTAGTAAATTTTGCACTGGGAATAGCAACCACCGATGTAAAGCGTAAGTGTCTGGAAGTATTGAGGCATGTTGAGGA CAACTTAAGTGGTGAATATATGACCGGAATTCATGCCTTGGTAAGCCCAGAGTTTTTTGATGCACTAACTTCTCATGCCA AAGTAAAAGAAGCATATGAGAGATGGCAAGAAGGGGCAGCGCTGAGGAACGACATGAGGTCAGGATTTACGTTCTGTGGA ATAACATTTGAGGAGTACAGAGGGCAAGCAACCGACCCTGAAGGAAATGTGAGAAGGTTTATAGAAAAAGACACAGGACA CTGTTTTCCACTTGGTACAGCAAGCACATTTACTACTTACTTTGCGCCAGCGGACTTTAATGAGACGGTGAATACCCTTG GTCAGCCATTGTATGCAAAACAAGAGCCAAGAAGATTTGATAGAGGGACTGACCTTCATACCCAATCAAACCCTCTACCA ATGTGCCACCGCCCAGGTATACTTGTAAAACTTGCTGCATAA
Upstream 100 bases:
>100_bases AATAAAGCAACTTGAAGCACGGGGCATCATCATTCGTAAGGGAGTTTAAAACTGCTCAACTGAAGAGCAAAACCAACTTA AAACACTAAAGGGGAAAAAC
Downstream 100 bases:
>100_bases CAGGTGAGGTAAACAGATTGTTTTTAATACCCCGAACAGGAAGCATTATATCAACTAAAGAATAAAAAGCAACTAAAAAA TTATGTTTAGAGATATTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Bacteriophage-Related Protein; Phage Related Protein; Phage Protein Gp; Phage-Like Protein; Bacteriophage-Like Protein
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MQNPFTNPAFSMTELTKAINILPINYGRTESLNLFPSRSVRFRHITIEEQNGVLSLLPTQVPGAPATVGKRGKRKIRTFT IPHIPHDDVVLPEEVQGIRAFGSENELKALANVVTDHLELMRNKHAITLEHLRMGALKGIILDADGSELLNLYNEFEITP KVVNFALGIATTDVKRKCLEVLRHVEDNLSGEYMTGIHALVSPEFFDALTSHAKVKEAYERWQEGAALRNDMRSGFTFCG ITFEEYRGQATDPEGNVRRFIEKDTGHCFPLGTASTFTTYFAPADFNETVNTLGQPLYAKQEPRRFDRGTDLHTQSNPLP MCHRPGILVKLAA
Sequences:
>Translated_333_residues MQNPFTNPAFSMTELTKAINILPINYGRTESLNLFPSRSVRFRHITIEEQNGVLSLLPTQVPGAPATVGKRGKRKIRTFT IPHIPHDDVVLPEEVQGIRAFGSENELKALANVVTDHLELMRNKHAITLEHLRMGALKGIILDADGSELLNLYNEFEITP KVVNFALGIATTDVKRKCLEVLRHVEDNLSGEYMTGIHALVSPEFFDALTSHAKVKEAYERWQEGAALRNDMRSGFTFCG ITFEEYRGQATDPEGNVRRFIEKDTGHCFPLGTASTFTTYFAPADFNETVNTLGQPLYAKQEPRRFDRGTDLHTQSNPLP MCHRPGILVKLAA >Mature_333_residues MQNPFTNPAFSMTELTKAINILPINYGRTESLNLFPSRSVRFRHITIEEQNGVLSLLPTQVPGAPATVGKRGKRKIRTFT IPHIPHDDVVLPEEVQGIRAFGSENELKALANVVTDHLELMRNKHAITLEHLRMGALKGIILDADGSELLNLYNEFEITP KVVNFALGIATTDVKRKCLEVLRHVEDNLSGEYMTGIHALVSPEFFDALTSHAKVKEAYERWQEGAALRNDMRSGFTFCG ITFEEYRGQATDPEGNVRRFIEKDTGHCFPLGTASTFTTYFAPADFNETVNTLGQPLYAKQEPRRFDRGTDLHTQSNPLP MCHRPGILVKLAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37303; Mature: 37303
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNPFTNPAFSMTELTKAINILPINYGRTESLNLFPSRSVRFRHITIEEQNGVLSLLPTQ CCCCCCCCCHHHHHHHHHHEEEECCCCCCCCEECCCCCCEEEEEEEEECCCCEEEECCCC VPGAPATVGKRGKRKIRTFTIPHIPHDDVVLPEEVQGIRAFGSENELKALANVVTDHLEL CCCCCCHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH MRNKHAITLEHLRMGALKGIILDADGSELLNLYNEFEITPKVVNFALGIATTDVKRKCLE HHCCCCEEHHHHHHHHHCEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH VLRHVEDNLSGEYMTGIHALVSPEFFDALTSHAKVKEAYERWQEGAALRNDMRSGFTFCG HHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE ITFEEYRGQATDPEGNVRRFIEKDTGHCFPLGTASTFTTYFAPADFNETVNTLGQPLYAK EEHHHHCCCCCCCCHHHHHHHHCCCCCEEECCCCHHHEEEECCCCCHHHHHHCCCCCCCC QEPRRFDRGTDLHTQSNPLPMCHRPGILVKLAA CCCHHCCCCCCCCCCCCCCCCCCCCCEEEEECC >Mature Secondary Structure MQNPFTNPAFSMTELTKAINILPINYGRTESLNLFPSRSVRFRHITIEEQNGVLSLLPTQ CCCCCCCCCHHHHHHHHHHEEEECCCCCCCCEECCCCCCEEEEEEEEECCCCEEEECCCC VPGAPATVGKRGKRKIRTFTIPHIPHDDVVLPEEVQGIRAFGSENELKALANVVTDHLEL CCCCCCHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH MRNKHAITLEHLRMGALKGIILDADGSELLNLYNEFEITPKVVNFALGIATTDVKRKCLE HHCCCCEEHHHHHHHHHCEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH VLRHVEDNLSGEYMTGIHALVSPEFFDALTSHAKVKEAYERWQEGAALRNDMRSGFTFCG HHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE ITFEEYRGQATDPEGNVRRFIEKDTGHCFPLGTASTFTTYFAPADFNETVNTLGQPLYAK EEHHHHCCCCCCCCHHHHHHHHCCCCCEEECCCCHHHEEEECCCCCHHHHHHCCCCCCCC QEPRRFDRGTDLHTQSNPLPMCHRPGILVKLAA CCCHHCCCCCCCCCCCCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA