Click here to switch to the map view.

The map label for this gene is 225630934

Identifier: 225630934

GI number: 225630934

Start: 1345028

End: 1345492

Strand: Reverse

Name: 225630934

Synonym: WRi_012540

Alternate gene names: NA

Gene position: 1345492-1345028 (Counterclockwise)

Preceding gene: 225630935

Following gene: 225630932

Centisome position: 93.06

GC content: 36.13

Gene sequence:

>465_bases
ATGTTAGACCATAATTTTGCGATTGCAGAGCTAAATAGGAAGTTAGCGAATATTATCCGTATTGGGCTTATTAAAGAAGT
AGATTATGAAAAGGCAAGAGTAAGGGTAAAGGTAGGGGAATTTATAACCGATTGGCTTCCGTGGATAACGGCAAGAGCAG
GAGAAGATAGAAGTTGGTTTGCGCCGAATATTGATGAGCAAGTAGTAATATTTTCGCCATTAGGTGAACTATCGTTAGGA
GTTATTTTGGCTGGAATATGGCAACAAAAATACCCTGCTCCGGAAAGCAAAAAAGAGGTAGATTGTTTTTTATTTGAAGA
CGGAACAAAAATATCATATGACAAGAAAAACCATCATTTGGAAGTATCTGTAGTTGATAAGATTACTTTTAGAGTTGGAG
AATCAAGTGTGAAGATTACCAAGAGAGGCATAAAACTCAAAGCAAAGAGAATCGACCTTAATTAA

Upstream 100 bases:

>100_bases
TATCTAGTGTGGATGGTTGAATGGGTGCATGAAATCCATGTAGGCAAGTCAATATTTTCAGGCGGAGTTACGCCACATGT
TATCGAAATAGGTAAAGCAC

Downstream 100 bases:

>100_bases
GTATGGCTAAAGCTGTGGTTTGTATAGGGGATTATTGTAGTGGAATACCGGCACATGTTTGTATGAGTGGTAGTAAGAGG
TTGTCCGGAAACAAGTAAAA

Product: baseplate assembly protein V

Products: NA

Alternate protein names: Baseplate Assembly Protein V; Phage Baseplate Assembly Protein; Phage-Related Baseplate Assembly Protein; Phage-Related Baseplate Protein; Phage-Related Baseplate Assembly Protein V; Baseplate Assembly Protein GpV; Pyocin R2_PP; Baseplate Assembly Protein; Phage P2-Like Baseplate Assembly Protein; Phage P2 Baseplate Assembly GpV Protein; Bacteriophage Baseplate Assembly Protein V; Phage Baseplate Assembly; Prophage LambdaW5 Baseplate Assembly Protein V; Baseplate Assembly Protein V Prophage; LOW QUALITY PROTEIN Baseplate Assembly Protein V; Prophage Baseplate Assembly Protein; Phage P2 Baseplate Assembly GpV-Like Protein; Phage Baseplate Assembly-Like Protein; Bacteriophage P2 Baseplate Assembly Protein GPV; Phage Baseplate Protein; Phage P2 Baseplate Assembly Protein GpV

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MLDHNFAIAELNRKLANIIRIGLIKEVDYEKARVRVKVGEFITDWLPWITARAGEDRSWFAPNIDEQVVIFSPLGELSLG
VILAGIWQQKYPAPESKKEVDCFLFEDGTKISYDKKNHHLEVSVVDKITFRVGESSVKITKRGIKLKAKRIDLN

Sequences:

>Translated_154_residues
MLDHNFAIAELNRKLANIIRIGLIKEVDYEKARVRVKVGEFITDWLPWITARAGEDRSWFAPNIDEQVVIFSPLGELSLG
VILAGIWQQKYPAPESKKEVDCFLFEDGTKISYDKKNHHLEVSVVDKITFRVGESSVKITKRGIKLKAKRIDLN
>Mature_154_residues
MLDHNFAIAELNRKLANIIRIGLIKEVDYEKARVRVKVGEFITDWLPWITARAGEDRSWFAPNIDEQVVIFSPLGELSLG
VILAGIWQQKYPAPESKKEVDCFLFEDGTKISYDKKNHHLEVSVVDKITFRVGESSVKITKRGIKLKAKRIDLN

Specific function: Unknown

COG id: COG4540

COG function: function code R; Phage P2 baseplate assembly protein gpV

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17637; Mature: 17637

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDHNFAIAELNRKLANIIRIGLIKEVDYEKARVRVKVGEFITDWLPWITARAGEDRSWF
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCCC
APNIDEQVVIFSPLGELSLGVILAGIWQQKYPAPESKKEVDCFLFEDGTKISYDKKNHHL
CCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEECCCCCEE
EVSVVDKITFRVGESSVKITKRGIKLKAKRIDLN
EEEEEEEEEEEECCCCEEEEECCEEEEEEEECCC
>Mature Secondary Structure
MLDHNFAIAELNRKLANIIRIGLIKEVDYEKARVRVKVGEFITDWLPWITARAGEDRSWF
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCCC
APNIDEQVVIFSPLGELSLGVILAGIWQQKYPAPESKKEVDCFLFEDGTKISYDKKNHHL
CCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEECCCCCEE
EVSVVDKITFRVGESSVKITKRGIKLKAKRIDLN
EEEEEEEEEEEECCCCEEEEECCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA