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The map label for this gene is pal [H]

Identifier: 225630914

GI number: 225630914

Start: 1321847

End: 1322326

Strand: Reverse

Name: pal [H]

Synonym: WRi_012300

Alternate gene names: 225630914

Gene position: 1322326-1321847 (Counterclockwise)

Preceding gene: 225630923

Following gene: 225630913

Centisome position: 91.46

GC content: 34.38

Gene sequence:

>480_bases
ATGTGGAGTAGACTGGTTATAATGTGCTGTTTTTGTTTATTACTTACTGGTGTAAGTTCTTGCCCAAAAAAAGGAGCAAA
TACAACAAATAAAATAAATTCTGTTGTTAAGCAGATAGGTAATAAAAGAGTTTTCTTTGGTTATGATGAATCTAGTATTG
CTGAAGTAAGTGCAGATGCATTACTTGACGTAATGGAGGTGTTACAAGATAACCCTGACGCGAAGGTTACTTTAACTGGT
CACACTGACAACCGTGGTTCTCATGAATATAATCTTGCGCTAGGCGCTAGAAGGGCAGATGCAGCTAAAAAATTTATGGT
TAGTTGTACACCCTACATAGAAAACAGAATAAAAACTGCTTCTAAAGGTGAAACTGAGCCTTTGGTTAATGTAAAAGATG
ATTCTAGAAATTCTAAATATGAAAAAGAGCATGCTAAAAATCGTAGAGTGGAATTTTCATTTTCTGGAATAAAGAAATAG

Upstream 100 bases:

>100_bases
TATTTAGTATTTTATTTCTCTTGACTATATTACAATATGGAGAGATATTAGCTACTGAAATTAAAGTTACGCACTATTTA
AAATTTATGGAGGTTTAGTA

Downstream 100 bases:

>100_bases
TTTCTTGCATTAAAACCTGGATCCCAGTGTCAAACACTGGGATGACATAAAGAAAGGGCACTGGGGTAGACAAAAAAGGA
CAAACTTGTCATATTTCGTT

Product: peptidoglycan-associated lipoprotein, putative

Products: NA

Alternate protein names: 19 kDa surface antigen; PPL [H]

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MWSRLVIMCCFCLLLTGVSSCPKKGANTTNKINSVVKQIGNKRVFFGYDESSIAEVSADALLDVMEVLQDNPDAKVTLTG
HTDNRGSHEYNLALGARRADAAKKFMVSCTPYIENRIKTASKGETEPLVNVKDDSRNSKYEKEHAKNRRVEFSFSGIKK

Sequences:

>Translated_159_residues
MWSRLVIMCCFCLLLTGVSSCPKKGANTTNKINSVVKQIGNKRVFFGYDESSIAEVSADALLDVMEVLQDNPDAKVTLTG
HTDNRGSHEYNLALGARRADAAKKFMVSCTPYIENRIKTASKGETEPLVNVKDDSRNSKYEKEHAKNRRVEFSFSGIKK
>Mature_159_residues
MWSRLVIMCCFCLLLTGVSSCPKKGANTTNKINSVVKQIGNKRVFFGYDESSIAEVSADALLDVMEVLQDNPDAKVTLTG
HTDNRGSHEYNLALGARRADAAKKFMVSCTPYIENRIKTASKGETEPLVNVKDDSRNSKYEKEHAKNRRVEFSFSGIKK

Specific function: Very strongly associated with the peptidoglycan [H]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 17696; Mature: 17696

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWSRLVIMCCFCLLLTGVSSCPKKGANTTNKINSVVKQIGNKRVFFGYDESSIAEVSADA
CCHHHHHHHHHHHHHHCHHCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHH
LLDVMEVLQDNPDAKVTLTGHTDNRGSHEYNLALGARRADAAKKFMVSCTPYIENRIKTA
HHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHCCHHHHHHHHCC
SKGETEPLVNVKDDSRNSKYEKEHAKNRRVEFSFSGIKK
CCCCCCCEEECCCCCCCCHHHHHHHHCCEEEEECCCCCC
>Mature Secondary Structure
MWSRLVIMCCFCLLLTGVSSCPKKGANTTNKINSVVKQIGNKRVFFGYDESSIAEVSADA
CCHHHHHHHHHHHHHHCHHCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHH
LLDVMEVLQDNPDAKVTLTGHTDNRGSHEYNLALGARRADAAKKFMVSCTPYIENRIKTA
HHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHCCHHHHHHHHCC
SKGETEPLVNVKDDSRNSKYEKEHAKNRRVEFSFSGIKK
CCCCCCCEEECCCCCCCCHHHHHHHHCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1766377; 1855972 [H]