| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
Click here to switch to the map view.
The map label for this gene is 225630901
Identifier: 225630901
GI number: 225630901
Start: 1309364
End: 1309906
Strand: Reverse
Name: 225630901
Synonym: WRi_012170
Alternate gene names: NA
Gene position: 1309906-1309364 (Counterclockwise)
Preceding gene: 225630902
Following gene: 225630884
Centisome position: 90.6
GC content: 31.86
Gene sequence:
>543_bases ATGGATTATATAAATGATGCTGCCGGTAGCTACACTGCTATTCATGATTTTTTTCAAAACAACGGTGTTGGAGATTACAA AGTTCAATGCAATTATGGTGGGGTGCCGTATGCTACTGATGAGTACGTGCATTCTGGCGATAAATTTTGGAGTAATAATT TCATAGACTCACATTTTGGCAGGGAAATAAAAATGTATCCTCAAAGTGAACTTTTAGCTAAAGAATATGCTGGAAATACG TTGCCAGTTTCAATATCACTAGATAAGGATTTAATAAAAATGAAGGAATGTCAGAAAAAAACGAAATTTGTGGAACTAGA AAGGGAGTCAGGTGATTTAGTGCATGATAAGCAAAAGTATGTAAAGTGTTACACAACAAAGCTATCATATGATGATGTAC ATATTTACAATAACGATAAAGTTTCAACATTTAGCATAAAATACGACGTGCCAAATGATCCGAAATACAGTTTAAATATA ACATTTACAAAGGTTAATGATAATAAACCAGGATTTTGGCAGAAATTTAAAAATATGTTTTAA
Upstream 100 bases:
>100_bases CTTGCTCAAAATCAGTTTTAAAAACAGCAAGGGAGAGCTTTTTTGATTGATTGGCATAATGATTATGATATAATGAACTA AAAATTTAAGGAATAAAGTA
Downstream 100 bases:
>100_bases CGTGACCATTCACTGGTTTTTACTCAATCAACCAACAACAGTTAATATCAAATTTTTATAATTAAAAAATATGCTATTTT TTAAAACTTTCATTCTCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MDYINDAAGSYTAIHDFFQNNGVGDYKVQCNYGGVPYATDEYVHSGDKFWSNNFIDSHFGREIKMYPQSELLAKEYAGNT LPVSISLDKDLIKMKECQKKTKFVELERESGDLVHDKQKYVKCYTTKLSYDDVHIYNNDKVSTFSIKYDVPNDPKYSLNI TFTKVNDNKPGFWQKFKNMF
Sequences:
>Translated_180_residues MDYINDAAGSYTAIHDFFQNNGVGDYKVQCNYGGVPYATDEYVHSGDKFWSNNFIDSHFGREIKMYPQSELLAKEYAGNT LPVSISLDKDLIKMKECQKKTKFVELERESGDLVHDKQKYVKCYTTKLSYDDVHIYNNDKVSTFSIKYDVPNDPKYSLNI TFTKVNDNKPGFWQKFKNMF >Mature_180_residues MDYINDAAGSYTAIHDFFQNNGVGDYKVQCNYGGVPYATDEYVHSGDKFWSNNFIDSHFGREIKMYPQSELLAKEYAGNT LPVSISLDKDLIKMKECQKKTKFVELERESGDLVHDKQKYVKCYTTKLSYDDVHIYNNDKVSTFSIKYDVPNDPKYSLNI TFTKVNDNKPGFWQKFKNMF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20935; Mature: 20935
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYINDAAGSYTAIHDFFQNNGVGDYKVQCNYGGVPYATDEYVHSGDKFWSNNFIDSHFG CCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCHHCC REIKMYPQSELLAKEYAGNTLPVSISLDKDLIKMKECQKKTKFVELERESGDLVHDKQKY CEEEECCCHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHEEEEECCCCCEEHHHHHE VKCYTTKLSYDDVHIYNNDKVSTFSIKYDVPNDPKYSLNITFTKVNDNKPGFWQKFKNMF EEEEEEEECCCEEEEECCCCEEEEEEEEECCCCCCEEEEEEEEEECCCCCHHHHHHHCCC >Mature Secondary Structure MDYINDAAGSYTAIHDFFQNNGVGDYKVQCNYGGVPYATDEYVHSGDKFWSNNFIDSHFG CCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCHHCC REIKMYPQSELLAKEYAGNTLPVSISLDKDLIKMKECQKKTKFVELERESGDLVHDKQKY CEEEECCCHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHEEEEECCCCCEEHHHHHE VKCYTTKLSYDDVHIYNNDKVSTFSIKYDVPNDPKYSLNITFTKVNDNKPGFWQKFKNMF EEEEEEEECCCEEEEECCCCEEEEEEEEECCCCCCEEEEEEEEEECCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA