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The map label for this gene is sdhD [H]

Identifier: 225630886

GI number: 225630886

Start: 1291948

End: 1292304

Strand: Direct

Name: sdhD [H]

Synonym: WRi_012010

Alternate gene names: 225630886

Gene position: 1291948-1292304 (Clockwise)

Preceding gene: 225630885

Following gene: 225630887

Centisome position: 89.35

GC content: 33.61

Gene sequence:

>357_bases
ATGAGTCAGTCTGGAAATTCAGTACATCATTGGTGGGTTCAGCGTGTTTCTGCGGTAATTTTACTGTTCCTGTTTCCTTG
GTTTATCTATTCATTTTCTTGCACATTTTATACTGATAGCTCTTTGTCTTTTAGTGAAAAATTTATTAATCACCCTCTAG
AGCTTTTATTTTTTGTTGTATTGTTGTTTTGCATTTTTTGGCACGCAGTTCTTGGAATGCAGGTAGTATGCGAAGATTAT
ATACACAGCGTACCTTTGAGGATTTTTACAATTACATGCATAAAGTACTTATCAAGCATTACTTATATAACCCTCGCTTT
TACAATCTTTATCTTCTACAGGCGTATTTTCTTGTAA

Upstream 100 bases:

>100_bases
ATGCTGGGCTTAATTTAGAAATTACTGGCGTTTCAAGGAGTGCTATACTGCTGACAGTAACGCTACTTCTTTCTACTATG
GCTTTTTTATTTATGTTTAT

Downstream 100 bases:

>100_bases
AATCACCGGTGCTGTGTTAATATATTATTAGTGTACTAGTTTTATTATTGAACTATAGCATTATAGCGATTTTGGTTTGA
CAATATGTTTGAAGCATTAA

Product: succinate dehydrogenase, hydrophobic membrane anchor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MSQSGNSVHHWWVQRVSAVILLFLFPWFIYSFSCTFYTDSSLSFSEKFINHPLELLFFVVLLFCIFWHAVLGMQVVCEDY
IHSVPLRIFTITCIKYLSSITYITLAFTIFIFYRRIFL

Sequences:

>Translated_118_residues
MSQSGNSVHHWWVQRVSAVILLFLFPWFIYSFSCTFYTDSSLSFSEKFINHPLELLFFVVLLFCIFWHAVLGMQVVCEDY
IHSVPLRIFTITCIKYLSSITYITLAFTIFIFYRRIFL
>Mature_117_residues
SQSGNSVHHWWVQRVSAVILLFLFPWFIYSFSCTFYTDSSLSFSEKFINHPLELLFFVVLLFCIFWHAVLGMQVVCEDYI
HSVPLRIFTITCIKYLSSITYITLAFTIFIFYRRIFL

Specific function: Membrane-anchoring subunit of succinate dehydrogenase (SDH) [H]

COG id: COG2142

COG function: function code C; Succinate dehydrogenase, hydrophobic anchor subunit

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014312
- InterPro:   IPR000701 [H]

Pfam domain/function: PF01127 Sdh_cyt [H]

EC number: NA

Molecular weight: Translated: 14074; Mature: 13943

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSGNSVHHWWVQRVSAVILLFLFPWFIYSFSCTFYTDSSLSFSEKFINHPLELLFFVV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHCHHHHHHHHH
LLFCIFWHAVLGMQVVCEDYIHSVPLRIFTITCIKYLSSITYITLAFTIFIFYRRIFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SQSGNSVHHWWVQRVSAVILLFLFPWFIYSFSCTFYTDSSLSFSEKFINHPLELLFFVV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHCHHHHHHHHH
LLFCIFWHAVLGMQVVCEDYIHSVPLRIFTITCIKYLSSITYITLAFTIFIFYRRIFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA