| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is yeeZ [C]
Identifier: 225630668
GI number: 225630668
Start: 1027371
End: 1028177
Strand: Reverse
Name: yeeZ [C]
Synonym: WRi_009560
Alternate gene names: 225630668
Gene position: 1028177-1027371 (Counterclockwise)
Preceding gene: 225630669
Following gene: 225630667
Centisome position: 71.11
GC content: 35.44
Gene sequence:
>807_bases ATGCACTTGTTTTGCTTTGGTTATGGATATGTAGCTAAATTTTTATCGAAAAAATTACTGAACTTAGGTTGGAAAGTCAG TGGCACATCAAGAAGTAAAAATATACAAGATGTAATCCTCTTTAATTATGAGAAAGTTAGTCAAGATCTGCTTAAAAGCG CAACGCACGTTTTAATTTCTATTCCTCCAGATGGCGATGATGTTGTGGAGAGATACGGTGATTGTCTGCAAAATGTAAAA TGGCTTGGTTATTTGTCTGCAACTAGCGTCTATGGTGATCACTCTGGTAATTGGGTGGATGAGGAATCTGAAACAAGACC TATAGAAATCAGAGGAGAAAAGCGCCTTAAATCTGAAAAGAAGTGGCTAAATAGCAAACTGCCTGTACATATTTTTCGTT TAGCTGGAATATACGGTCCTGGTAGGAACGTGTTAATTGACTTGCAGCTTGGCAAAGCAAGAAATGTGAAAAAAGAAGGG CATTTTTTTTCTCGTATTCACGTTGAAGATATATCGAATATTTTATTTTCTTCCATGCAAAACATAAAACCTGGTGAAAT ATACAATTGTGCAGACGATTTACCCACTACACAATCTGAAGTGGTAATATATGCGACCAAACTTCTCAATGTTAGCCCTC CAGAACCAATTGAGTTACCAGATTATGCACAGAGTTTTTATTTAGGATCAAAGAGAGTAAGTAATGTTAAAATTAAAAAA GATCTTAATGTCTCTCTAATTTATCCTAACTACAAGGTGGGATTAGAGAGTTTGCACGTAAACAAAACTGAAATCACATC AGAATGA
Upstream 100 bases:
>100_bases TTGAAGGACACCCAATTCATGCATTAGGGCATATTATTAATGAAGAGGGAATAAAATTAGGAGTAGAATTTATCAAGAAG AATTTTAAAAATTAATTTTC
Downstream 100 bases:
>100_bases TAGATAGGCTTATTGTCACTGCCATTAAGTTAAGGAAAGAATGGTTAAAAACTGAACTAAAAAGTCAGAAATAATTAAGG ATTTATGACAAATGCTGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Nucleoside-Diphosphate-Sugar Epimerases; Nucleoside-Diphosphate-Sugar Epimerase Protein; NAD Dependent Epimerase/Dehydratase; Oxidoreductase Protein; NAD Dependent Epimerase/Dehydratase Family; ActC Family Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Oxidoreductase; Epimerase/Dehydratase-Related Protein; Phosphate ABC Transporter Permease; Ketopantoate Reductase ApbA/PanE Domain Protein; NAD Epimerase/Dehydratase Protein; NAD-Dependent Epimerase; Actc Protein
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MHLFCFGYGYVAKFLSKKLLNLGWKVSGTSRSKNIQDVILFNYEKVSQDLLKSATHVLISIPPDGDDVVERYGDCLQNVK WLGYLSATSVYGDHSGNWVDEESETRPIEIRGEKRLKSEKKWLNSKLPVHIFRLAGIYGPGRNVLIDLQLGKARNVKKEG HFFSRIHVEDISNILFSSMQNIKPGEIYNCADDLPTTQSEVVIYATKLLNVSPPEPIELPDYAQSFYLGSKRVSNVKIKK DLNVSLIYPNYKVGLESLHVNKTEITSE
Sequences:
>Translated_268_residues MHLFCFGYGYVAKFLSKKLLNLGWKVSGTSRSKNIQDVILFNYEKVSQDLLKSATHVLISIPPDGDDVVERYGDCLQNVK WLGYLSATSVYGDHSGNWVDEESETRPIEIRGEKRLKSEKKWLNSKLPVHIFRLAGIYGPGRNVLIDLQLGKARNVKKEG HFFSRIHVEDISNILFSSMQNIKPGEIYNCADDLPTTQSEVVIYATKLLNVSPPEPIELPDYAQSFYLGSKRVSNVKIKK DLNVSLIYPNYKVGLESLHVNKTEITSE >Mature_268_residues MHLFCFGYGYVAKFLSKKLLNLGWKVSGTSRSKNIQDVILFNYEKVSQDLLKSATHVLISIPPDGDDVVERYGDCLQNVK WLGYLSATSVYGDHSGNWVDEESETRPIEIRGEKRLKSEKKWLNSKLPVHIFRLAGIYGPGRNVLIDLQLGKARNVKKEG HFFSRIHVEDISNILFSSMQNIKPGEIYNCADDLPTTQSEVVIYATKLLNVSPPEPIELPDYAQSFYLGSKRVSNVKIKK DLNVSLIYPNYKVGLESLHVNKTEITSE
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30368; Mature: 30368
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLFCFGYGYVAKFLSKKLLNLGWKVSGTSRSKNIQDVILFNYEKVSQDLLKSATHVLIS CEEEEEEHHHHHHHHHHHHHHCCCEECCCCCCCCCCEEEEECHHHHHHHHHHHHCEEEEE IPPDGDDVVERYGDCLQNVKWLGYLSATSVYGDHSGNWVDEESETRPIEIRGEKRLKSEK CCCCCHHHHHHHHHHHHCCHHHEEEEHHEECCCCCCCCCCCCCCCCCEEECCHHHHHHHH KWLNSKLPVHIFRLAGIYGPGRNVLIDLQLGKARNVKKEGHFFSRIHVEDISNILFSSMQ HHHCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCEEEEEEHHHHHHHHHHHHH NIKPGEIYNCADDLPTTQSEVVIYATKLLNVSPPEPIELPDYAQSFYLGSKRVSNVKIKK CCCCCCEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCEEEEE DLNVSLIYPNYKVGLESLHVNKTEITSE CCEEEEECCCHHCCHHHEECCHHHCCCC >Mature Secondary Structure MHLFCFGYGYVAKFLSKKLLNLGWKVSGTSRSKNIQDVILFNYEKVSQDLLKSATHVLIS CEEEEEEHHHHHHHHHHHHHHCCCEECCCCCCCCCCEEEEECHHHHHHHHHHHHCEEEEE IPPDGDDVVERYGDCLQNVKWLGYLSATSVYGDHSGNWVDEESETRPIEIRGEKRLKSEK CCCCCHHHHHHHHHHHHCCHHHEEEEHHEECCCCCCCCCCCCCCCCCEEECCHHHHHHHH KWLNSKLPVHIFRLAGIYGPGRNVLIDLQLGKARNVKKEGHFFSRIHVEDISNILFSSMQ HHHCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCEEEEEEHHHHHHHHHHHHH NIKPGEIYNCADDLPTTQSEVVIYATKLLNVSPPEPIELPDYAQSFYLGSKRVSNVKIKK CCCCCCEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCEEEEE DLNVSLIYPNYKVGLESLHVNKTEITSE CCEEEEECCCHHCCHHHEECCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA