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The map label for this gene is tldD [H]

Identifier: 225630662

GI number: 225630662

Start: 1018314

End: 1019732

Strand: Reverse

Name: tldD [H]

Synonym: WRi_009460

Alternate gene names: 225630662

Gene position: 1019732-1018314 (Counterclockwise)

Preceding gene: 225630666

Following gene: 225630661

Centisome position: 70.53

GC content: 39.18

Gene sequence:

>1419_bases
ATGCCAAATCTAGATCAAATATTTTTTGCTCAAAACAATGTTAATATTAATAACGTATATAAAATAGTCAATAACGCTTT
GAGCAATAGCGATGGTGGTGAGCTGTTTCTAGAATTTTGCCAGTCGGAGTCCCTGGTTTTTGAGGATAACATATTAAAAC
ACATGGACTTGAATACTAGAAGGGGATTTGGTTTAAGGTCTTTTTGTGAAGATAGTACATCTTTCGTTTGTTCTTCTGAG
ATCAGCGAAAAAGAAATTAGTAATGCTGCTTCTATGGTAAAAAGCTCAGTGTCTTTAAACAAGACAAATTCAATAAATTT
AAACGAAGAGACAAAAAGCCTATATTCGAGGATTAACCCTATAAATGAAATGGATCTGAATTCAAAGATTAAGCTACTCA
ATGAGGTTAATGAGTATGTAAGGTCCAAAAATAACTGCGTGAAGCAAGTAAAAATAACTCTAAGTGGAGAATGGCAAGTT
GTACAAATAATAAAGGGTGATCACAGATTAAGCGATATCAGGCCTCTGGTACGTTTTAATGTGCTAGTCATTGTAGAAAA
AGATGGCCGTACCGAAAGAGGTTCTGCAGGGCATGGTGGAAGGGACTCTTATAGTAAGTTTATTTCTGAGAAAAAGTGGA
AAGAAGTTGCAAACCAAGCGTTAGAACAAGCACTGGTAAATCTTGAAGCAATTCCAACTCCAGCCGGAGAAATGACAGTC
GTTTTAGGTCCAGGCTGGCCAGGAATATTGTTACACGAAGCCGTGGGTCATGGACTTGAGGGCGACTTCAATCGCAAAAA
AGTCTCAGCATTTTCAAATTCTGTGGGTAAACAAGTAGCAGCTAGTGACATCACAGTAGTTGATGACGGAACTCTGCCCA
ATTTGCGCGGCTCTATCAGCGTAGACGATGAAGGCACTCCACCCAGTTATAATATATTGATAGAGGATGGGATCCTAAAA
GGATACATGCAGGATCATATGAACGCTAAACTCATGGGTGTAAGCCCAACTGGTAATGGTAGAAGAGACAGTTATAAAGA
AGTTATTATGCCGCGCATGACAAACACCTATATGTTGCCCGGAAAGTATACACCGAAGGAAATAATATCTAGCGTAAAGA
AAGGTCTATATGCAGTAAATTTCGGTGGTGGGCAGGTTGATATAACGTCAGGAAAATTTGTTTTTTCATCTTCGGAAGCT
TACCTAATAGAAAATGGCAAAATTACACAGCCAGTAAAAGGAGCAACACTAATTGGTGACGGTCCAACAGTGTTGAAAAA
AGTATCTATGGTTGGTAATGACTTAAAGTTAGATCCTGGTGTTGGCACATGCTCGAAAGATGGACAAAATGTGCCCGTTG
GAGTTGGTCAGCCGACACTCAAAGTCGACGCAATAACTGTTGGTGGAACTGAGATATAG

Upstream 100 bases:

>100_bases
CCTGAAGCTAGCGCGTCTACCAATTCCGCCACCCGGGCTTTTTATAGTTTACTATGTTAAAGTTAAATAATATACTTAAA
CAATTTTTAGTTCAAAGGTA

Downstream 100 bases:

>100_bases
ATAAGGGCTAAAACGGATTCCAGCGCACGGCGCACAGCTGTACAAACATTATGATTTGGAAGCAATTGCCACCAATAGGG
TGTCATCCCAGTGTCTGGGC

Product: TldD protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 471

Protein sequence:

>472_residues
MPNLDQIFFAQNNVNINNVYKIVNNALSNSDGGELFLEFCQSESLVFEDNILKHMDLNTRRGFGLRSFCEDSTSFVCSSE
ISEKEISNAASMVKSSVSLNKTNSINLNEETKSLYSRINPINEMDLNSKIKLLNEVNEYVRSKNNCVKQVKITLSGEWQV
VQIIKGDHRLSDIRPLVRFNVLVIVEKDGRTERGSAGHGGRDSYSKFISEKKWKEVANQALEQALVNLEAIPTPAGEMTV
VLGPGWPGILLHEAVGHGLEGDFNRKKVSAFSNSVGKQVAASDITVVDDGTLPNLRGSISVDDEGTPPSYNILIEDGILK
GYMQDHMNAKLMGVSPTGNGRRDSYKEVIMPRMTNTYMLPGKYTPKEIISSVKKGLYAVNFGGGQVDITSGKFVFSSSEA
YLIENGKITQPVKGATLIGDGPTVLKKVSMVGNDLKLDPGVGTCSKDGQNVPVGVGQPTLKVDAITVGGTEI

Sequences:

>Translated_472_residues
MPNLDQIFFAQNNVNINNVYKIVNNALSNSDGGELFLEFCQSESLVFEDNILKHMDLNTRRGFGLRSFCEDSTSFVCSSE
ISEKEISNAASMVKSSVSLNKTNSINLNEETKSLYSRINPINEMDLNSKIKLLNEVNEYVRSKNNCVKQVKITLSGEWQV
VQIIKGDHRLSDIRPLVRFNVLVIVEKDGRTERGSAGHGGRDSYSKFISEKKWKEVANQALEQALVNLEAIPTPAGEMTV
VLGPGWPGILLHEAVGHGLEGDFNRKKVSAFSNSVGKQVAASDITVVDDGTLPNLRGSISVDDEGTPPSYNILIEDGILK
GYMQDHMNAKLMGVSPTGNGRRDSYKEVIMPRMTNTYMLPGKYTPKEIISSVKKGLYAVNFGGGQVDITSGKFVFSSSEA
YLIENGKITQPVKGATLIGDGPTVLKKVSMVGNDLKLDPGVGTCSKDGQNVPVGVGQPTLKVDAITVGGTEI
>Mature_471_residues
PNLDQIFFAQNNVNINNVYKIVNNALSNSDGGELFLEFCQSESLVFEDNILKHMDLNTRRGFGLRSFCEDSTSFVCSSEI
SEKEISNAASMVKSSVSLNKTNSINLNEETKSLYSRINPINEMDLNSKIKLLNEVNEYVRSKNNCVKQVKITLSGEWQVV
QIIKGDHRLSDIRPLVRFNVLVIVEKDGRTERGSAGHGGRDSYSKFISEKKWKEVANQALEQALVNLEAIPTPAGEMTVV
LGPGWPGILLHEAVGHGLEGDFNRKKVSAFSNSVGKQVAASDITVVDDGTLPNLRGSISVDDEGTPPSYNILIEDGILKG
YMQDHMNAKLMGVSPTGNGRRDSYKEVIMPRMTNTYMLPGKYTPKEIISSVKKGLYAVNFGGGQVDITSGKFVFSSSEAY
LIENGKITQPVKGATLIGDGPTVLKKVSMVGNDLKLDPGVGTCSKDGQNVPVGVGQPTLKVDAITVGGTEI

Specific function: Suppresses the inhibitory activity of the carbon storage regulator (CsrA) [H]

COG id: COG0312

COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U62 family [H]

Homologues:

Organism=Escherichia coli, GI1789640, Length=473, Percent_Identity=52.2198731501057, Blast_Score=469, Evalue=1e-133,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002510 [H]

Pfam domain/function: PF01523 PmbA_TldD [H]

EC number: NA

Molecular weight: Translated: 51360; Mature: 51229

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNLDQIFFAQNNVNINNVYKIVNNALSNSDGGELFLEFCQSESLVFEDNILKHMDLNTR
CCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEECCCCHHHCCCCCC
RGFGLRSFCEDSTSFVCSSEISEKEISNAASMVKSSVSLNKTNSINLNEETKSLYSRINP
CCCCHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCC
INEMDLNSKIKLLNEVNEYVRSKNNCVKQVKITLSGEWQVVQIIKGDHRLSDIRPLVRFN
CCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEECCCCCHHHHHHEEEEE
VLVIVEKDGRTERGSAGHGGRDSYSKFISEKKWKEVANQALEQALVNLEAIPTPAGEMTV
EEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
VLGPGWPGILLHEAVGHGLEGDFNRKKVSAFSNSVGKQVAASDITVVDDGTLPNLRGSIS
EECCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEE
VDDEGTPPSYNILIEDGILKGYMQDHMNAKLMGVSPTGNGRRDSYKEVIMPRMTNTYMLP
ECCCCCCCCEEEEEECCHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHCCCCCCEEECC
GKYTPKEIISSVKKGLYAVNFGGGQVDITSGKFVFSSSEAYLIENGKITQPVKGATLIGD
CCCCHHHHHHHHHCCEEEEEECCCEEEEECCEEEEECCCEEEEECCCCCCCCCCCEEECC
GPTVLKKVSMVGNDLKLDPGVGTCSKDGQNVPVGVGQPTLKVDAITVGGTEI
CHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC
>Mature Secondary Structure 
PNLDQIFFAQNNVNINNVYKIVNNALSNSDGGELFLEFCQSESLVFEDNILKHMDLNTR
CCCCCEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEECCCCHHHCCCCCC
RGFGLRSFCEDSTSFVCSSEISEKEISNAASMVKSSVSLNKTNSINLNEETKSLYSRINP
CCCCHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCC
INEMDLNSKIKLLNEVNEYVRSKNNCVKQVKITLSGEWQVVQIIKGDHRLSDIRPLVRFN
CCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEECCCCCHHHHHHEEEEE
VLVIVEKDGRTERGSAGHGGRDSYSKFISEKKWKEVANQALEQALVNLEAIPTPAGEMTV
EEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
VLGPGWPGILLHEAVGHGLEGDFNRKKVSAFSNSVGKQVAASDITVVDDGTLPNLRGSIS
EECCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEE
VDDEGTPPSYNILIEDGILKGYMQDHMNAKLMGVSPTGNGRRDSYKEVIMPRMTNTYMLP
ECCCCCCCCEEEEEECCHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHCCCCCCEEECC
GKYTPKEIISSVKKGLYAVNFGGGQVDITSGKFVFSSSEAYLIENGKITQPVKGATLIGD
CCCCHHHHHHHHHCCEEEEEECCCEEEEECCEEEEECCCEEEEECCCCCCCCCCCEEECC
GPTVLKKVSMVGNDLKLDPGVGTCSKDGQNVPVGVGQPTLKVDAITVGGTEI
CHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]