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The map label for this gene is yrbE [C]

Identifier: 225630652

GI number: 225630652

Start: 1007342

End: 1008124

Strand: Direct

Name: yrbE [C]

Synonym: WRi_009360

Alternate gene names: 225630652

Gene position: 1007342-1008124 (Clockwise)

Preceding gene: 225630648

Following gene: 225630653

Centisome position: 69.67

GC content: 35.63

Gene sequence:

>783_bases
GTGAGCTTTTTTGATATAAATAGTGTTAGAATAATTGGTAGGTACTTTATCAATTTTTTGTTAAGGCTTGGTAGTGCATT
CATATTTTTTATTCAATCTCTATACCACTGCCTTGTGCCGCCATATTATTTTAGCAACGTAGCAAGACAAATTATAGAGA
TAGGCTTTTTCTCTCTGCCAATTGTTGGGCTCACTGGAGTTTTCATAGGAGCGGCGATAGTTTTACAAAGCAGCTTGAGT
GACCCATTAATTAACCAAGAACAGATAATACCCAAACTTGTTACGATCACTATCATTAAAGAGTTAGGACCAGTTTTGAT
CAGCTTAATAATGGTAGGAAAGGTTGGATCATCAGTTGCAGCAGAAATTGGTACAATGCGCATCACCGAGCAAATAGATG
CACTTACAACCTTGAACATCAACCCTTTTAAATATTTAATTGCACCAAGGATTTTAGCGTCAATCATAGTATTTCCCATA
CTTACAGTATGTGCAGATTTAATAGGAATATTTGGAGGATGTATCACTGCAGTCTTCGAATTTAACCACAATTTAAATAT
ATACATTAAACACACAGCTCAGTTCTTTAATACGTATGATTTTATAACTGGGCTAATAAAAGCAACTGTATTTGGCGCCA
TAATTTCTGTCTCAAGCTGCTATTACGGTTACCATTGCAAAGAAGGTGCACGAGGAGTAGGTGTTGCTACAACATCAACT
GTTGTTTTATCGTCCATACTGATCATTTTAGCAAACTACATGATTACTTTGATACATGCGTAA

Upstream 100 bases:

>100_bases
ATATCGAACTTAAAACATATCTCAGCTATACTTTGCGATAAAGTTAATAAAAATTTTAATAAAATCAGTAAGACTAACCT
CTAGCTAAAATGAATACAAA

Downstream 100 bases:

>100_bases
CCCCATAATATCAATATTGAACTTAAGCTTATCTTTTGATGATAGGACAGTACTAAAAGATCTAAATTTTGATATATTAA
AAGGGGAATCATTAGTCATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MSFFDINSVRIIGRYFINFLLRLGSAFIFFIQSLYHCLVPPYYFSNVARQIIEIGFFSLPIVGLTGVFIGAAIVLQSSLS
DPLINQEQIIPKLVTITIIKELGPVLISLIMVGKVGSSVAAEIGTMRITEQIDALTTLNINPFKYLIAPRILASIIVFPI
LTVCADLIGIFGGCITAVFEFNHNLNIYIKHTAQFFNTYDFITGLIKATVFGAIISVSSCYYGYHCKEGARGVGVATTST
VVLSSILIILANYMITLIHA

Sequences:

>Translated_260_residues
MSFFDINSVRIIGRYFINFLLRLGSAFIFFIQSLYHCLVPPYYFSNVARQIIEIGFFSLPIVGLTGVFIGAAIVLQSSLS
DPLINQEQIIPKLVTITIIKELGPVLISLIMVGKVGSSVAAEIGTMRITEQIDALTTLNINPFKYLIAPRILASIIVFPI
LTVCADLIGIFGGCITAVFEFNHNLNIYIKHTAQFFNTYDFITGLIKATVFGAIISVSSCYYGYHCKEGARGVGVATTST
VVLSSILIILANYMITLIHA
>Mature_259_residues
SFFDINSVRIIGRYFINFLLRLGSAFIFFIQSLYHCLVPPYYFSNVARQIIEIGFFSLPIVGLTGVFIGAAIVLQSSLSD
PLINQEQIIPKLVTITIIKELGPVLISLIMVGKVGSSVAAEIGTMRITEQIDALTTLNINPFKYLIAPRILASIIVFPIL
TVCADLIGIFGGCITAVFEFNHNLNIYIKHTAQFFNTYDFITGLIKATVFGAIISVSSCYYGYHCKEGARGVGVATTSTV
VLSSILIILANYMITLIHA

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=256, Percent_Identity=30.859375, Blast_Score=122, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 28506; Mature: 28375

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SFFDINSVRIIGRYFINFLLRLGSAFIFFIQSLYHCLVPPYYFSNVARQIIEIGFFSLP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
IVGLTGVFIGAAIVLQSSLSDPLINQEQIIPKLVTITIIKELGPVLISLIMVGKVGSSVA
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
AEIGTMRITEQIDALTTLNINPFKYLIAPRILASIIVFPILTVCADLIGIFGGCITAVFE
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FNHNLNIYIKHTAQFFNTYDFITGLIKATVFGAIISVSSCYYGYHCKEGARGVGVATTST
HCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
VVLSSILIILANYMITLIHA
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA