Click here to switch to the map view.

The map label for this gene is ftsY [H]

Identifier: 225630589

GI number: 225630589

Start: 926299

End: 927210

Strand: Direct

Name: ftsY [H]

Synonym: WRi_008550

Alternate gene names: 225630589

Gene position: 926299-927210 (Clockwise)

Preceding gene: 225630584

Following gene: 225630591

Centisome position: 64.07

GC content: 36.07

Gene sequence:

>912_bases
TTGAGTTTATTTGGTAACCTTTATAAAGGCTTGTTAAAAACTTCTTCTCGCTTTAGCGACGGAGTGAAAAGTATTTTTTC
TGGCAAAAAAAAATTAGATCAGTCGCTTTTAGATGAGCTAGAAGAATTGCTAATTAGCATGGACATTGGTCATAAAACTT
CTAAGTTGATTATCGATAGGCTCACAAGCATCAAATTTGACAAGGAAGTTGAGTATAATATTATCACGCAGCAATTAGTG
AATGAAATAGAAGCTATATTAAATCCAGTCGTGCAGCCGTTAATTTTAAATAAAAAACCACATATAATAATGGTATGCGG
AGTAAACGGTAATGGTAAAACCACGACTATAGGTAAGCTTGCATATAAATATAAGGAGATGAGAAAATCCGTTATGCTTG
TTGCGTGTGACACATTTAGAGCTGCTGCTAGTGAGCAATTAAACATTTGGGCAGAACGTTCTGATTGCTTGATTGTTACT
GGAGAGTACGGTAGCGACTCTGCAAGTGTGGCATATAGAGCTGTAAGTCAAGCTATAAAGGATAACGTTGATGTTGTTCT
AATTGACACAGCAGGAAGGCTGCAAAATAATGTGAACCTTATGGAGGAGTTATCAAAAATATATAGAACGATAAAGAAAT
TGGATGGTACTGCCCCTCATGACGTTATTTTAGTTCTTGATGCAACTACCGGCCAAAATGCTTATAGCCAATTAGAAGCA
TTTAGCAAAATGGTTAATGTTACCGGGCTAATCGTAACAAAGTTAGATGGCACTGCTAAGGGCGGAGTGGTAATTGGACT
TGCAGAAGCTTATAAGATAAAGTTACATGCTATAGGAATTGGCGAAAATATAGAGGACTTAAGGGAGTTTACTAGCAAAG
AATTTGCTGAAGCGTTATTTAATTGTAATTAA

Upstream 100 bases:

>100_bases
ATATTTTACTCACAAAATATATGGGTTACGAGTGTATTTACTTTACAAATACACGTAGTGCATGTCATTCTCTATATTGT
AATTAAAAAGGAGTATTCCC

Downstream 100 bases:

>100_bases
AAATTTCTCTTAATTCCCTTACGTGACCAAGCTTAATTATCTCAATATCATGAGAAGAGTAATTACCATTTTTAGGCATA
ATTGCTTTTTTGAATCCTAA

Product: signal recognition particle docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MSLFGNLYKGLLKTSSRFSDGVKSIFSGKKKLDQSLLDELEELLISMDIGHKTSKLIIDRLTSIKFDKEVEYNIITQQLV
NEIEAILNPVVQPLILNKKPHIIMVCGVNGNGKTTTIGKLAYKYKEMRKSVMLVACDTFRAAASEQLNIWAERSDCLIVT
GEYGSDSASVAYRAVSQAIKDNVDVVLIDTAGRLQNNVNLMEELSKIYRTIKKLDGTAPHDVILVLDATTGQNAYSQLEA
FSKMVNVTGLIVTKLDGTAKGGVVIGLAEAYKIKLHAIGIGENIEDLREFTSKEFAEALFNCN

Sequences:

>Translated_303_residues
MSLFGNLYKGLLKTSSRFSDGVKSIFSGKKKLDQSLLDELEELLISMDIGHKTSKLIIDRLTSIKFDKEVEYNIITQQLV
NEIEAILNPVVQPLILNKKPHIIMVCGVNGNGKTTTIGKLAYKYKEMRKSVMLVACDTFRAAASEQLNIWAERSDCLIVT
GEYGSDSASVAYRAVSQAIKDNVDVVLIDTAGRLQNNVNLMEELSKIYRTIKKLDGTAPHDVILVLDATTGQNAYSQLEA
FSKMVNVTGLIVTKLDGTAKGGVVIGLAEAYKIKLHAIGIGENIEDLREFTSKEFAEALFNCN
>Mature_302_residues
SLFGNLYKGLLKTSSRFSDGVKSIFSGKKKLDQSLLDELEELLISMDIGHKTSKLIIDRLTSIKFDKEVEYNIITQQLVN
EIEAILNPVVQPLILNKKPHIIMVCGVNGNGKTTTIGKLAYKYKEMRKSVMLVACDTFRAAASEQLNIWAERSDCLIVTG
EYGSDSASVAYRAVSQAIKDNVDVVLIDTAGRLQNNVNLMEELSKIYRTIKKLDGTAPHDVILVLDATTGQNAYSQLEAF
SKMVNVTGLIVTKLDGTAKGGVVIGLAEAYKIKLHAIGIGENIEDLREFTSKEFAEALFNCN

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI226371618, Length=232, Percent_Identity=33.6206896551724, Blast_Score=128, Evalue=6e-30,
Organism=Homo sapiens, GI4507215, Length=232, Percent_Identity=33.6206896551724, Blast_Score=128, Evalue=8e-30,
Organism=Homo sapiens, GI295424842, Length=305, Percent_Identity=27.5409836065574, Blast_Score=109, Evalue=3e-24,
Organism=Homo sapiens, GI23308697, Length=305, Percent_Identity=27.5409836065574, Blast_Score=109, Evalue=3e-24,
Organism=Homo sapiens, GI89061728, Length=135, Percent_Identity=33.3333333333333, Blast_Score=84, Evalue=1e-16,
Organism=Escherichia coli, GI1789874, Length=304, Percent_Identity=48.6842105263158, Blast_Score=259, Evalue=1e-70,
Organism=Escherichia coli, GI1788963, Length=309, Percent_Identity=28.4789644012945, Blast_Score=124, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17539958, Length=275, Percent_Identity=30.9090909090909, Blast_Score=130, Evalue=6e-31,
Organism=Caenorhabditis elegans, GI193206261, Length=221, Percent_Identity=32.1266968325792, Blast_Score=103, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6325345, Length=203, Percent_Identity=36.9458128078818, Blast_Score=126, Evalue=4e-30,
Organism=Saccharomyces cerevisiae, GI6320498, Length=223, Percent_Identity=30.4932735426009, Blast_Score=94, Evalue=3e-20,
Organism=Drosophila melanogaster, GI17647949, Length=276, Percent_Identity=30.7971014492754, Blast_Score=130, Evalue=1e-30,
Organism=Drosophila melanogaster, GI24641198, Length=292, Percent_Identity=28.7671232876712, Blast_Score=103, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 33357; Mature: 33226

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: PS00149 SULFATASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFGNLYKGLLKTSSRFSDGVKSIFSGKKKLDQSLLDELEELLISMDIGHKTSKLIIDR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LTSIKFDKEVEYNIITQQLVNEIEAILNPVVQPLILNKKPHIIMVCGVNGNGKTTTIGKL
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEHHHHH
AYKYKEMRKSVMLVACDTFRAAASEQLNIWAERSDCLIVTGEYGSDSASVAYRAVSQAIK
HHHHHHHHHHEEEEEEHHHHHHCCCHHEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHH
DNVDVVLIDTAGRLQNNVNLMEELSKIYRTIKKLDGTAPHDVILVLDATTGQNAYSQLEA
CCCCEEEEECCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHH
FSKMVNVTGLIVTKLDGTAKGGVVIGLAEAYKIKLHAIGIGENIEDLREFTSKEFAEALF
HHHHHHHHEEEEEECCCCCCCCEEEEEECEEEEEEEEEECCCCHHHHHHHHHHHHHHHHH
NCN
CCC
>Mature Secondary Structure 
SLFGNLYKGLLKTSSRFSDGVKSIFSGKKKLDQSLLDELEELLISMDIGHKTSKLIIDR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LTSIKFDKEVEYNIITQQLVNEIEAILNPVVQPLILNKKPHIIMVCGVNGNGKTTTIGKL
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEHHHHH
AYKYKEMRKSVMLVACDTFRAAASEQLNIWAERSDCLIVTGEYGSDSASVAYRAVSQAIK
HHHHHHHHHHEEEEEEHHHHHHCCCHHEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHH
DNVDVVLIDTAGRLQNNVNLMEELSKIYRTIKKLDGTAPHDVILVLDATTGQNAYSQLEA
CCCCEEEEECCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHH
FSKMVNVTGLIVTKLDGTAKGGVVIGLAEAYKIKLHAIGIGENIEDLREFTSKEFAEALF
HHHHHHHHEEEEEECCCCCCCCEEEEEECEEEEEEEEEECCCCHHHHHHHHHHHHHHHHH
NCN
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]