| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
Click here to switch to the map view.
The map label for this gene is 225630505
Identifier: 225630505
GI number: 225630505
Start: 819117
End: 820313
Strand: Direct
Name: 225630505
Synonym: WRi_007560
Alternate gene names: NA
Gene position: 819117-820313 (Clockwise)
Preceding gene: 225630497
Following gene: 225630506
Centisome position: 56.65
GC content: 32.5
Gene sequence:
>1197_bases ATGAATGTTTATCCAAGTAATGAATTCTGGGAGAGTGATTTAGAAGTTCCTGTTAACCTCTTACTAGAACGTTTTCAGGA TTCTAATGTACGTCAATCTTGGTTAGATTCCCTTTCTGGTAAACAACTTAGCATCATTTTTCAGCATTGCTTTAAAAATC ATTTAAATGGGCAACTTTTTCAGGACGGAAATTATGACGATAGATCCACTCAACAAAAACGTAAGATACTTACCAGTTAC TCTGACTCTCTTTTTGACTATTATCTCATTAGCTACTTTGATCGTACAAAACTTGAGGCTACAGTTAGTGAAGTAGCAAG ATTTGCTCTGACTGAGAAGTTAATGAGATCGTACCTGGTAAAAAACAATACCAAGTATGATAAAAGATCCTTATTGTTTT TACTATTTCACATAAATTGTGAACTTCTAAAATCTGTCTATCACTTTGATAAAGTACAAAAGAGAGGTTTCGTATCATTT GCTCTACAGAAATCACCAAGACAAATAAACACTTCATTCAAGGAATTTATGTCACAAGAAGCTGTAGAGCAGATACTGAA GTTTGAAAACCAATTGCAGGGTTTTTTCCATCATCAAGATCGGATATATATGTTTGTACGTCGAGGAAGTGACATGGATT TACTGCTTAATTCAAACAAAGTTGTTCATGGCCATAAACCTGAGTGGATGATTTTAGATTTTTCGATTGATGGTACAAAG GTTAATCTCTGTGCTAAAAATACCAATAAAGCTGTGGAAATAGCAAATAGTATTGTAAGTGGTTATTTTAACTGCGAATG TACTTTTGTAAATATACAAGATAAGAACTTTCCATTACAAGTGTACAAATTTCTTCAAGCATGTATAGATGGTTCTGACC CTGACATTTGTATATTTGAGTTAAATTTTAAGTCAGATTATTTTAAAAATAGTAATACATATCTTACTTTGAGTGTAAAG CCATATGATCCTATTGCACCAGAGTTACATATTTTAAAGCCAGCTATTGGCAACATACTACAATCTATTCAATCAGCTAA AGTAATGTTCCAAAACAAAAAGGTAACATTTTCTTTCAAAATAAGTGGGGAAGTTTATTATTCAGAGCATCCACTCAATA AAAAAGAAAGAGAGGACCTGAAGAAACATATGGAACAATCTTATGGTCTTAAAATCCTTTCACGAGCAAATTGCTGA
Upstream 100 bases:
>100_bases AAATTCTCCCTAATAAATATACAAGATTTGAAAAAATTATGTCCAAAAAATCTTTGCTTAAATTATCATATTATATATGA TATAGCTTATTTAAAGTATC
Downstream 100 bases:
>100_bases TCTTTTAAGTTTGAATAATTCCTGGATCAATCCAAGTCAAAATCATATTAAAGCAGCAAGATACTTATTTGATCTTGGAT TGATAAAAATGCAAGAAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MNVYPSNEFWESDLEVPVNLLLERFQDSNVRQSWLDSLSGKQLSIIFQHCFKNHLNGQLFQDGNYDDRSTQQKRKILTSY SDSLFDYYLISYFDRTKLEATVSEVARFALTEKLMRSYLVKNNTKYDKRSLLFLLFHINCELLKSVYHFDKVQKRGFVSF ALQKSPRQINTSFKEFMSQEAVEQILKFENQLQGFFHHQDRIYMFVRRGSDMDLLLNSNKVVHGHKPEWMILDFSIDGTK VNLCAKNTNKAVEIANSIVSGYFNCECTFVNIQDKNFPLQVYKFLQACIDGSDPDICIFELNFKSDYFKNSNTYLTLSVK PYDPIAPELHILKPAIGNILQSIQSAKVMFQNKKVTFSFKISGEVYYSEHPLNKKEREDLKKHMEQSYGLKILSRANC
Sequences:
>Translated_398_residues MNVYPSNEFWESDLEVPVNLLLERFQDSNVRQSWLDSLSGKQLSIIFQHCFKNHLNGQLFQDGNYDDRSTQQKRKILTSY SDSLFDYYLISYFDRTKLEATVSEVARFALTEKLMRSYLVKNNTKYDKRSLLFLLFHINCELLKSVYHFDKVQKRGFVSF ALQKSPRQINTSFKEFMSQEAVEQILKFENQLQGFFHHQDRIYMFVRRGSDMDLLLNSNKVVHGHKPEWMILDFSIDGTK VNLCAKNTNKAVEIANSIVSGYFNCECTFVNIQDKNFPLQVYKFLQACIDGSDPDICIFELNFKSDYFKNSNTYLTLSVK PYDPIAPELHILKPAIGNILQSIQSAKVMFQNKKVTFSFKISGEVYYSEHPLNKKEREDLKKHMEQSYGLKILSRANC >Mature_398_residues MNVYPSNEFWESDLEVPVNLLLERFQDSNVRQSWLDSLSGKQLSIIFQHCFKNHLNGQLFQDGNYDDRSTQQKRKILTSY SDSLFDYYLISYFDRTKLEATVSEVARFALTEKLMRSYLVKNNTKYDKRSLLFLLFHINCELLKSVYHFDKVQKRGFVSF ALQKSPRQINTSFKEFMSQEAVEQILKFENQLQGFFHHQDRIYMFVRRGSDMDLLLNSNKVVHGHKPEWMILDFSIDGTK VNLCAKNTNKAVEIANSIVSGYFNCECTFVNIQDKNFPLQVYKFLQACIDGSDPDICIFELNFKSDYFKNSNTYLTLSVK PYDPIAPELHILKPAIGNILQSIQSAKVMFQNKKVTFSFKISGEVYYSEHPLNKKEREDLKKHMEQSYGLKILSRANC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46590; Mature: 46590
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVYPSNEFWESDLEVPVNLLLERFQDSNVRQSWLDSLSGKQLSIIFQHCFKNHLNGQLF CCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEE QDGNYDDRSTQQKRKILTSYSDSLFDYYLISYFDRTKLEATVSEVARFALTEKLMRSYLV ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KNNTKYDKRSLLFLLFHINCELLKSVYHFDKVQKRGFVSFALQKSPRQINTSFKEFMSQE CCCCCCCHHHHEEHHHHCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHH AVEQILKFENQLQGFFHHQDRIYMFVRRGSDMDLLLNSNKVVHGHKPEWMILDFSIDGTK HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCEEEECCCCCEEEEEEEECCCE VNLCAKNTNKAVEIANSIVSGYFNCECTFVNIQDKNFPLQVYKFLQACIDGSDPDICIFE EEEEECCCCHHHHHHHHHHCCCEEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEE LNFKSDYFKNSNTYLTLSVKPYDPIAPELHILKPAIGNILQSIQSAKVMFQNKKVTFSFK EECCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCEEEEEEE ISGEVYYSEHPLNKKEREDLKKHMEQSYGLKILSRANC ECCEEEECCCCCCHHHHHHHHHHHHHHCCEEEEECCCC >Mature Secondary Structure MNVYPSNEFWESDLEVPVNLLLERFQDSNVRQSWLDSLSGKQLSIIFQHCFKNHLNGQLF CCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEE QDGNYDDRSTQQKRKILTSYSDSLFDYYLISYFDRTKLEATVSEVARFALTEKLMRSYLV ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KNNTKYDKRSLLFLLFHINCELLKSVYHFDKVQKRGFVSFALQKSPRQINTSFKEFMSQE CCCCCCCHHHHEEHHHHCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHH AVEQILKFENQLQGFFHHQDRIYMFVRRGSDMDLLLNSNKVVHGHKPEWMILDFSIDGTK HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCEEEECCCCCEEEEEEEECCCE VNLCAKNTNKAVEIANSIVSGYFNCECTFVNIQDKNFPLQVYKFLQACIDGSDPDICIFE EEEEECCCCHHHHHHHHHHCCCEEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEE LNFKSDYFKNSNTYLTLSVKPYDPIAPELHILKPAIGNILQSIQSAKVMFQNKKVTFSFK EECCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCEEEEEEE ISGEVYYSEHPLNKKEREDLKKHMEQSYGLKILSRANC ECCEEEECCCCCCHHHHHHHHHHHHHHCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA