| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630481
Identifier: 225630481
GI number: 225630481
Start: 790583
End: 792562
Strand: Reverse
Name: 225630481
Synonym: WRi_007310
Alternate gene names: NA
Gene position: 792562-790583 (Counterclockwise)
Preceding gene: 225630482
Following gene: 225630480
Centisome position: 54.82
GC content: 37.27
Gene sequence:
>1980_bases ATGAAAAAGTCTATGTATACTAGAACTGCTCTAGTTTCTTTATTAACTTTATGTTCTTTCAGCAGTTTTGCAGCTGACTT TCCTGATGAGAGTATGAAGGAAATAAAAAAGCAAGAGAGCACAAAAACTTCTGGAAAAACAGAAGTTATGAAAACATCAA ATAAAAAACTGAAAGAAAAGATGGACAGAATATGTAATGCTGATCCAAGAAAAAAAGCTGAAGAGCTTAAGAAAAAAGAG GAGCTAAGATTAGCAGCCGAGCAGAAGAAAAAAGAGGAGATCAGGCTAGCAAATGAGAAAAAAGCAAAGCTTATAGAGGA TTCAAAAGCGAAAGCTCTAAACGCTAAGAATTCTAATATAGAAAAAGGTAAAGTTTCAAAAACTAAGCGTTCTAAAACTA AGAATGCTAAAGTTGAAGCTAAAGATGTAAAGAAGGATATAAAAGTTGTTAACAAAAATACAGAGGAAAAAGGTAAGGCA AGTCCTGTTGTTTCAGTTGGTGGAGTTGATATTATCGATACCAATCAAGGGCAAAGTAATTTAAGAATAACTTTTGGTGG TGTTGTTGATGCTCAAGGTTATGGCAAAGCTGGACCAAGTGGCGCAGATTATAAACGTTATAACGTTATGCCAAACAGAT CTACAGAGTATTATAATGCCACTCCAGATATAACAAAAGGAGCAAATCCAATATTCTATGAAGGAATAGGAAATATTGGT GATTACAGCAACGATATGGGTATGATTGCTGATGCAATATTGCACCTCAGAGCAGAAAATAAGAATGAAGATTTAGGTCT TCTTTATGGTGCTGACGTGCAGTTTCATGTCCCAGTGACCGAAGGTAAGGGAGCTTCACAGGGTGTTTATGCTGCAAAAG GCAGAAGTGCGCATGTGTTTGTTAACTCAAAATATGGTGACGTGAAGCTTGGTTACCAATTTGGTCCTGAGGCTCTGATG AGGCTTGATGCAACAAGAATTGCGACTGTTGACGGAGCTGCAGATAGTGACTGGTTCAGAAAAGTGAACTTAGAAGGAAG CGCTGCTAGCTTTCCATTTTATGTAACACCACGTCTTTACACTGAAAGTTTTTCGAGTGAAAGTGAAAAATTCTCTTTCC GTATGGCAGGGAAATATAACAAAGGCGTTATGACTACACTGCCATTTAGAGTTGCTTACTACTCACCAAATTATATGGGC GCAAGATTTGGTATCAGCTACTCACCTCGTTATGATAGTGGTTTGTTTACTGTAAAAGAAACAGTTTCAGAAGATAAAGG CGGTAAGATAGAACATAAGGAAACGATAAAGCATGTCGGCCCAGACTATGAGCACATAGTAAGTGCTGGTGCATCATATG AATATGACTTTGATAAACATAACATAAAAGTTAAAACTTCTGCAGTTGGTGAATATGGCTTTCCAAAGCAACCAAGTAAA GATAAGCATCTTTATAAGGAATTTGTGGAGTATAATGACCTGATGGGTGTTAATTTTGGTGTAAGCGCTGATTATAAGAT TAATGAAGATCAAGGCGTAAAGTTTGCTGCCTCTTTTGCATACTTGGGCAAATCTGGTCAACCGAAGGGTATTAAAAAAT TAATTGGTGATACCTATACGGAAATTGATAGTAAAGATGCTACTGATGGCAAAAGAGTGGAAGGGCTGAAAGCTCAATTT GGTAAAGATAGTATAGATACCATGTATTGGACTGTAGGAGCTGGGTATCAACATGAGAATATCTACACAAGTTTGACGTA TTTTGGCAGCAGAATGAATGACAAAGATATGCTTCATGATGGTGCACTTGGCGTTCAATATGATCTGTCTCCTGCATGCA GTAAGAACAAATTTGTTCCTTACGCAGCTCTCCATTATTTTATGACTAACGAAACAGGTAAGCTGAAAGATGAGTCTGAT GCTGATGTACCTTCTAACCAAGGAATTCTCCTTCTTACTGGTGTGAAGTTTTCTTTCTAA
Upstream 100 bases:
>100_bases TACTTTTATTTTCGTTATAAGGTTGCTTTAAGTTGAATTTTCAACATTTTTATACTATTTACATTTAAGATATGATTTCG AAATTTTTTGGGGGCACTTC
Downstream 100 bases:
>100_bases CCAGCCAGTACACACCACAGTTAATTGTGGTGTATTCTTGTCTGTTAGTGTTTATTTGTCGATCAAATAAACATATGGTG TCCTCTCTCCTGTCATCCCA
Product: Putative outer membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 659; Mature: 659
Protein sequence:
>659_residues MKKSMYTRTALVSLLTLCSFSSFAADFPDESMKEIKKQESTKTSGKTEVMKTSNKKLKEKMDRICNADPRKKAEELKKKE ELRLAAEQKKKEEIRLANEKKAKLIEDSKAKALNAKNSNIEKGKVSKTKRSKTKNAKVEAKDVKKDIKVVNKNTEEKGKA SPVVSVGGVDIIDTNQGQSNLRITFGGVVDAQGYGKAGPSGADYKRYNVMPNRSTEYYNATPDITKGANPIFYEGIGNIG DYSNDMGMIADAILHLRAENKNEDLGLLYGADVQFHVPVTEGKGASQGVYAAKGRSAHVFVNSKYGDVKLGYQFGPEALM RLDATRIATVDGAADSDWFRKVNLEGSAASFPFYVTPRLYTESFSSESEKFSFRMAGKYNKGVMTTLPFRVAYYSPNYMG ARFGISYSPRYDSGLFTVKETVSEDKGGKIEHKETIKHVGPDYEHIVSAGASYEYDFDKHNIKVKTSAVGEYGFPKQPSK DKHLYKEFVEYNDLMGVNFGVSADYKINEDQGVKFAASFAYLGKSGQPKGIKKLIGDTYTEIDSKDATDGKRVEGLKAQF GKDSIDTMYWTVGAGYQHENIYTSLTYFGSRMNDKDMLHDGALGVQYDLSPACSKNKFVPYAALHYFMTNETGKLKDESD ADVPSNQGILLLTGVKFSF
Sequences:
>Translated_659_residues MKKSMYTRTALVSLLTLCSFSSFAADFPDESMKEIKKQESTKTSGKTEVMKTSNKKLKEKMDRICNADPRKKAEELKKKE ELRLAAEQKKKEEIRLANEKKAKLIEDSKAKALNAKNSNIEKGKVSKTKRSKTKNAKVEAKDVKKDIKVVNKNTEEKGKA SPVVSVGGVDIIDTNQGQSNLRITFGGVVDAQGYGKAGPSGADYKRYNVMPNRSTEYYNATPDITKGANPIFYEGIGNIG DYSNDMGMIADAILHLRAENKNEDLGLLYGADVQFHVPVTEGKGASQGVYAAKGRSAHVFVNSKYGDVKLGYQFGPEALM RLDATRIATVDGAADSDWFRKVNLEGSAASFPFYVTPRLYTESFSSESEKFSFRMAGKYNKGVMTTLPFRVAYYSPNYMG ARFGISYSPRYDSGLFTVKETVSEDKGGKIEHKETIKHVGPDYEHIVSAGASYEYDFDKHNIKVKTSAVGEYGFPKQPSK DKHLYKEFVEYNDLMGVNFGVSADYKINEDQGVKFAASFAYLGKSGQPKGIKKLIGDTYTEIDSKDATDGKRVEGLKAQF GKDSIDTMYWTVGAGYQHENIYTSLTYFGSRMNDKDMLHDGALGVQYDLSPACSKNKFVPYAALHYFMTNETGKLKDESD ADVPSNQGILLLTGVKFSF >Mature_659_residues MKKSMYTRTALVSLLTLCSFSSFAADFPDESMKEIKKQESTKTSGKTEVMKTSNKKLKEKMDRICNADPRKKAEELKKKE ELRLAAEQKKKEEIRLANEKKAKLIEDSKAKALNAKNSNIEKGKVSKTKRSKTKNAKVEAKDVKKDIKVVNKNTEEKGKA SPVVSVGGVDIIDTNQGQSNLRITFGGVVDAQGYGKAGPSGADYKRYNVMPNRSTEYYNATPDITKGANPIFYEGIGNIG DYSNDMGMIADAILHLRAENKNEDLGLLYGADVQFHVPVTEGKGASQGVYAAKGRSAHVFVNSKYGDVKLGYQFGPEALM RLDATRIATVDGAADSDWFRKVNLEGSAASFPFYVTPRLYTESFSSESEKFSFRMAGKYNKGVMTTLPFRVAYYSPNYMG ARFGISYSPRYDSGLFTVKETVSEDKGGKIEHKETIKHVGPDYEHIVSAGASYEYDFDKHNIKVKTSAVGEYGFPKQPSK DKHLYKEFVEYNDLMGVNFGVSADYKINEDQGVKFAASFAYLGKSGQPKGIKKLIGDTYTEIDSKDATDGKRVEGLKAQF GKDSIDTMYWTVGAGYQHENIYTSLTYFGSRMNDKDMLHDGALGVQYDLSPACSKNKFVPYAALHYFMTNETGKLKDESD ADVPSNQGILLLTGVKFSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73076; Mature: 73076
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSMYTRTALVSLLTLCSFSSFAADFPDESMKEIKKQESTKTSGKTEVMKTSNKKLKEK CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH MDRICNADPRKKAEELKKKEELRLAAEQKKKEEIRLANEKKAKLIEDSKAKALNAKNSNI HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHEECCCCCCC EKGKVSKTKRSKTKNAKVEAKDVKKDIKVVNKNTEEKGKASPVVSVGGVDIIDTNQGQSN CCCCCCHHHHHCCCCCCEEHHHHHHHHHHHCCCCHHCCCCCCEEEECCEEEEECCCCCCE LRITFGGVVDAQGYGKAGPSGADYKRYNVMPNRSTEYYNATPDITKGANPIFYEGIGNIG EEEEECCEEECCCCCCCCCCCCCCEEEECCCCCCCCCEECCCCCCCCCCCEEECCCCCCC DYSNDMGMIADAILHLRAENKNEDLGLLYGADVQFHVPVTEGKGASQGVYAAKGRSAHVF CCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEEECCCCCCCCCEEEECCCEEEEE VNSKYGDVKLGYQFGPEALMRLDATRIATVDGAADSDWFRKVNLEGSAASFPFYVTPRLY EECCCCCEEECCCCCHHHHHHHCCHHEEEECCCCCCCHHEEEECCCCCCCCCEEECCHHH TESFSSESEKFSFRMAGKYNKGVMTTLPFRVAYYSPNYMGARFGISYSPRYDSGLFTVKE HHHCCCCCCEEEEEECCCCCCCEEEEECEEEEEECCCCCCEEECCEECCCCCCCCEEEHH TVSEDKGGKIEHKETIKHVGPDYEHIVSAGASYEYDFDKHNIKVKTSAVGEYGFPKQPSK HHCCCCCCCCCHHHHHHHCCCCHHHHHHCCCCEEECCCCCCEEEEEEECCCCCCCCCCCC DKHLYKEFVEYNDLMGVNFGVSADYKINEDQGVKFAASFAYLGKSGQPKGIKKLIGDTYT HHHHHHHHHHHHCEECCCCCCCCCEEECCCCCCEEEEEHHHHCCCCCCHHHHHHHCCHHH EIDSKDATDGKRVEGLKAQFGKDSIDTMYWTVGAGYQHENIYTSLTYFGSRMNDKDMLHD HCCCCCCCCCHHHCCHHHHCCCCCCCEEEEEECCCCCCCCCEEEHHHHCCCCCCHHHHCC GALGVQYDLSPACSKNKFVPYAALHYFMTNETGKLKDESDADVPSNQGILLLTGVKFSF CCCCEEECCCCCCCCCCCCCHHHEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCEECC >Mature Secondary Structure MKKSMYTRTALVSLLTLCSFSSFAADFPDESMKEIKKQESTKTSGKTEVMKTSNKKLKEK CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH MDRICNADPRKKAEELKKKEELRLAAEQKKKEEIRLANEKKAKLIEDSKAKALNAKNSNI HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHEECCCCCCC EKGKVSKTKRSKTKNAKVEAKDVKKDIKVVNKNTEEKGKASPVVSVGGVDIIDTNQGQSN CCCCCCHHHHHCCCCCCEEHHHHHHHHHHHCCCCHHCCCCCCEEEECCEEEEECCCCCCE LRITFGGVVDAQGYGKAGPSGADYKRYNVMPNRSTEYYNATPDITKGANPIFYEGIGNIG EEEEECCEEECCCCCCCCCCCCCCEEEECCCCCCCCCEECCCCCCCCCCCEEECCCCCCC DYSNDMGMIADAILHLRAENKNEDLGLLYGADVQFHVPVTEGKGASQGVYAAKGRSAHVF CCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEEECCCCCCCCCEEEECCCEEEEE VNSKYGDVKLGYQFGPEALMRLDATRIATVDGAADSDWFRKVNLEGSAASFPFYVTPRLY EECCCCCEEECCCCCHHHHHHHCCHHEEEECCCCCCCHHEEEECCCCCCCCCEEECCHHH TESFSSESEKFSFRMAGKYNKGVMTTLPFRVAYYSPNYMGARFGISYSPRYDSGLFTVKE HHHCCCCCCEEEEEECCCCCCCEEEEECEEEEEECCCCCCEEECCEECCCCCCCCEEEHH TVSEDKGGKIEHKETIKHVGPDYEHIVSAGASYEYDFDKHNIKVKTSAVGEYGFPKQPSK HHCCCCCCCCCHHHHHHHCCCCHHHHHHCCCCEEECCCCCCEEEEEEECCCCCCCCCCCC DKHLYKEFVEYNDLMGVNFGVSADYKINEDQGVKFAASFAYLGKSGQPKGIKKLIGDTYT HHHHHHHHHHHHCEECCCCCCCCCEEECCCCCCEEEEEHHHHCCCCCCHHHHHHHCCHHH EIDSKDATDGKRVEGLKAQFGKDSIDTMYWTVGAGYQHENIYTSLTYFGSRMNDKDMLHD HCCCCCCCCCHHHCCHHHHCCCCCCCEEEEEECCCCCCCCCEEEHHHHCCCCCCHHHHCC GALGVQYDLSPACSKNKFVPYAALHYFMTNETGKLKDESDADVPSNQGILLLTGVKFSF CCCCEEECCCCCCCCCCCCCHHHEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA