| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630480
Identifier: 225630480
GI number: 225630480
Start: 789340
End: 790146
Strand: Reverse
Name: 225630480
Synonym: WRi_007300
Alternate gene names: NA
Gene position: 790146-789340 (Counterclockwise)
Preceding gene: 225630481
Following gene: 225630479
Centisome position: 54.65
GC content: 32.22
Gene sequence:
>807_bases ATGCAAACCACACTAAAAAATCATTTAGCTGGAGAATTACTTACCACTGCTACGTGCTGGAAATTAACGCTTGCAGGTGG AGAAGTAATGGGATTCACTGACTATGATGAAGACTTAAATATTGATAATATACTCTATAAATCTTCAAGTGGATTTACAG CCAGTAGTATAATATTAAACAGCAATTTAAAGACTGATAATTTGGAAATTGAGGGAATATTAAATAGTGTTGATATCAAA AAAAAAGATGTTTTATCAGGAAAGTACGACTTTGCAAATATTGAGATATTTCTTGTGAATTATAAAGACTTGACCCAGGG AACAATGAATCTACATTCAGGAATTTTTGGTAAAGTGACATTAAGTAGTGGAAGATTTATTGTTGAAATTAGAGGGCTTT CAGCAAAGCTTGAGAGAAGCATAGCAGAATTATACTCTCCTGCATGCAGAGCACAATTTTGCGATGATAAATGTAAAGCC GATACTAAAAAATTTAGTAAAATAAGTACAATCACTAAAGTAATAGACGAAAGAAGATTTGAAGACACGAATTTAACTGA GAGTGATGAATATTATAAGCACGGAGTAGTAAAATTCTTTGGCTCAATAGCGTTTGAAGGTGTAGTAAAAGAATATAAAA ATAAAGTAGTTACGTTGTTTACTTCGCCTCCATACCAAATTTTTGCTGGAGATAAATATTCAATACTCGCAGGTTGCGAT AAAACATTTCCAACTTGCAGAAGCAAGTTTAACAATACTGTGAATTTTCGTGGTGAACCCTATATACCAGGTTTTTATAT TGTTTAG
Upstream 100 bases:
>100_bases CGCTTTATGGCTACTTAGATGATGAGAAAAGAACACACTGCCCTTATTCTACTGGCCGTATAGCTACTTTCAAATTTAAT CAATTAAGCAGGAGGACCCT
Downstream 100 bases:
>100_bases CAGTACAATTTTCAATATTATGAATAAGCATGGAAAGGTGGCTGAGTGGTCTAAAGCACACGCTTGGAAAGCGTGCACAT ATGAAAATATGTCGGGGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Bacteriophage Protein; Gene Transfer Agent-Like Protein; NlpC/P60 Family Phage Cell Wall Peptidase
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MQTTLKNHLAGELLTTATCWKLTLAGGEVMGFTDYDEDLNIDNILYKSSSGFTASSIILNSNLKTDNLEIEGILNSVDIK KKDVLSGKYDFANIEIFLVNYKDLTQGTMNLHSGIFGKVTLSSGRFIVEIRGLSAKLERSIAELYSPACRAQFCDDKCKA DTKKFSKISTITKVIDERRFEDTNLTESDEYYKHGVVKFFGSIAFEGVVKEYKNKVVTLFTSPPYQIFAGDKYSILAGCD KTFPTCRSKFNNTVNFRGEPYIPGFYIV
Sequences:
>Translated_268_residues MQTTLKNHLAGELLTTATCWKLTLAGGEVMGFTDYDEDLNIDNILYKSSSGFTASSIILNSNLKTDNLEIEGILNSVDIK KKDVLSGKYDFANIEIFLVNYKDLTQGTMNLHSGIFGKVTLSSGRFIVEIRGLSAKLERSIAELYSPACRAQFCDDKCKA DTKKFSKISTITKVIDERRFEDTNLTESDEYYKHGVVKFFGSIAFEGVVKEYKNKVVTLFTSPPYQIFAGDKYSILAGCD KTFPTCRSKFNNTVNFRGEPYIPGFYIV >Mature_268_residues MQTTLKNHLAGELLTTATCWKLTLAGGEVMGFTDYDEDLNIDNILYKSSSGFTASSIILNSNLKTDNLEIEGILNSVDIK KKDVLSGKYDFANIEIFLVNYKDLTQGTMNLHSGIFGKVTLSSGRFIVEIRGLSAKLERSIAELYSPACRAQFCDDKCKA DTKKFSKISTITKVIDERRFEDTNLTESDEYYKHGVVKFFGSIAFEGVVKEYKNKVVTLFTSPPYQIFAGDKYSILAGCD KTFPTCRSKFNNTVNFRGEPYIPGFYIV
Specific function: Unknown
COG id: COG5449
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30046; Mature: 30046
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: PS00093 N4_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTTLKNHLAGELLTTATCWKLTLAGGEVMGFTDYDEDLNIDNILYKSSSGFTASSIILN CCCCHHHHHHHHHHHHEEEEEEEECCCEEEECCCCCCCCCCCCEEEECCCCCEEEEEEEE SNLKTDNLEIEGILNSVDIKKKDVLSGKYDFANIEIFLVNYKDLTQGTMNLHSGIFGKVT CCCCCCCEEEEEECCCCCCCHHHHCCCCCCEEEEEEEEEECHHHCCCHHHHCCCCEEEEE LSSGRFIVEIRGLSAKLERSIAELYSPACRAQFCDDKCKADTKKFSKISTITKVIDERRF ECCCEEEEEEECCHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC EDTNLTESDEYYKHGVVKFFGSIAFEGVVKEYKNKVVTLFTSPPYQIFAGDKYSILAGCD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCEEEEECCC KTFPTCRSKFNNTVNFRGEPYIPGFYIV CCCHHHHHHCCCEEECCCCCCCCCEEEC >Mature Secondary Structure MQTTLKNHLAGELLTTATCWKLTLAGGEVMGFTDYDEDLNIDNILYKSSSGFTASSIILN CCCCHHHHHHHHHHHHEEEEEEEECCCEEEECCCCCCCCCCCCEEEECCCCCEEEEEEEE SNLKTDNLEIEGILNSVDIKKKDVLSGKYDFANIEIFLVNYKDLTQGTMNLHSGIFGKVT CCCCCCCEEEEEECCCCCCCHHHHCCCCCCEEEEEEEEEECHHHCCCHHHHCCCCEEEEE LSSGRFIVEIRGLSAKLERSIAELYSPACRAQFCDDKCKADTKKFSKISTITKVIDERRF ECCCEEEEEEECCHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC EDTNLTESDEYYKHGVVKFFGSIAFEGVVKEYKNKVVTLFTSPPYQIFAGDKYSILAGCD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCEEEEECCC KTFPTCRSKFNNTVNFRGEPYIPGFYIV CCCHHHHHHCCCEEECCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA