| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
Click here to switch to the map view.
The map label for this gene is yhcG [H]
Identifier: 225630473
GI number: 225630473
Start: 777158
End: 778216
Strand: Reverse
Name: yhcG [H]
Synonym: WRi_007190
Alternate gene names: 225630473
Gene position: 778216-777158 (Counterclockwise)
Preceding gene: 225630474
Following gene: 225630472
Centisome position: 53.82
GC content: 35.03
Gene sequence:
>1059_bases ATGATAAAAATCGTTGAAAGGAATTTTATGACAAAAGTTATAGCAAAAGAATATACAGAATTTTTAGAGCAGCTGAAAGA GCAGATTGCTACTAGTCGTTATAAAGCAGCATTAGCAGTAAATAGCAAGCTTATTGTGCTTTATCACCATATTGGCACAG AGATCTTAAAGCGGCAAAAAGAACATGGTTGGGGTGCTAAAATTATTGATCAACTCAGTCGTGATTTAAGAGATGCTTTT CCTGATATGAAGGGGTTTAGCATTCAGAATCTAAAATATATGAGAAGGTTTGCGGAAGAATATAGCGAAAATGAAATTGG TCAACAAGCTGTTGACCAATTACCTTGGGGACACAATATTGTAATAATGTACGAAGTTAAAAATAAAGAAGAAAGATTTT GGTATATTAAAAAATCATGTGAACACGGCTGGTCTCGCAATATCTTGTCTATGCAAATAGAGACAAATTTGTATAAACGT GAAGGTAAAGCAATAACAAACTTTAGGAATAATCTTATATCACCTCAATCAGATTTAGCACAGCAAACGCTCAAAAATCC TTATGTATTTGATTTTTTAAGCCTTGGTAAAAAAGCGCATGAAAGGGAGATAGAAAAAGCTCTTGTAGCTCACATAGAAC GTTTTCTTTTAGAGCTTGGTGAAGGGTTTGCATTTTTAGGAAGGCAGTACCATTTACGGGTTGGAGACAGAGATTTCTAT TTAGATTTGGTTTTTTACCATATTAAGCTCCGTTGCTATGTTGTAATTGAGTTAAAGGCCGGTAAATTTAGGCCAGAATA TACTGGGAAGATGAATTTTTACCTTTCAGCAGTTGATGATTTATTAAGACAGCCAGGTGATAATCAATCAATTGGTCTTA TCCTATACCGCTCTAAAGTTGGTGTTATAGCCGAGTACGCATTACGTGACATAAATAAGCCGATAGGCCTTGCGGAATAT AGGATAACCGAGAATCTACCAGAGAATATAAAGACAGCTTTACCAACGATAGAGGAATTAGAAGCTGAGTTATCTAAAGT TTCAGATCAGGAAAAGTGA
Upstream 100 bases:
>100_bases ATTTATTGAATTTAAGACAACGAATTAAGGCTGAGTTAAAAGTTGCAGGTATGAAGCCAAAGAGGAAAATTGTTTTTTCA ACGAGTAAAGGGATCATATA
Downstream 100 bases:
>100_bases TGCTACTTAAGTCATTCAAACAACTATTTAACAAGCCAAAAATCAAAAGCTCAGCATGGGATGCAGCAGGCTCAGGAAGA AGATTTTTACACTTTCAACC
Product: phage uncharacterized protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MIKIVERNFMTKVIAKEYTEFLEQLKEQIATSRYKAALAVNSKLIVLYHHIGTEILKRQKEHGWGAKIIDQLSRDLRDAF PDMKGFSIQNLKYMRRFAEEYSENEIGQQAVDQLPWGHNIVIMYEVKNKEERFWYIKKSCEHGWSRNILSMQIETNLYKR EGKAITNFRNNLISPQSDLAQQTLKNPYVFDFLSLGKKAHEREIEKALVAHIERFLLELGEGFAFLGRQYHLRVGDRDFY LDLVFYHIKLRCYVVIELKAGKFRPEYTGKMNFYLSAVDDLLRQPGDNQSIGLILYRSKVGVIAEYALRDINKPIGLAEY RITENLPENIKTALPTIEELEAELSKVSDQEK
Sequences:
>Translated_352_residues MIKIVERNFMTKVIAKEYTEFLEQLKEQIATSRYKAALAVNSKLIVLYHHIGTEILKRQKEHGWGAKIIDQLSRDLRDAF PDMKGFSIQNLKYMRRFAEEYSENEIGQQAVDQLPWGHNIVIMYEVKNKEERFWYIKKSCEHGWSRNILSMQIETNLYKR EGKAITNFRNNLISPQSDLAQQTLKNPYVFDFLSLGKKAHEREIEKALVAHIERFLLELGEGFAFLGRQYHLRVGDRDFY LDLVFYHIKLRCYVVIELKAGKFRPEYTGKMNFYLSAVDDLLRQPGDNQSIGLILYRSKVGVIAEYALRDINKPIGLAEY RITENLPENIKTALPTIEELEAELSKVSDQEK >Mature_352_residues MIKIVERNFMTKVIAKEYTEFLEQLKEQIATSRYKAALAVNSKLIVLYHHIGTEILKRQKEHGWGAKIIDQLSRDLRDAF PDMKGFSIQNLKYMRRFAEEYSENEIGQQAVDQLPWGHNIVIMYEVKNKEERFWYIKKSCEHGWSRNILSMQIETNLYKR EGKAITNFRNNLISPQSDLAQQTLKNPYVFDFLSLGKKAHEREIEKALVAHIERFLLELGEGFAFLGRQYHLRVGDRDFY LDLVFYHIKLRCYVVIELKAGKFRPEYTGKMNFYLSAVDDLLRQPGDNQSIGLILYRSKVGVIAEYALRDINKPIGLAEY RITENLPENIKTALPTIEELEAELSKVSDQEK
Specific function: Unknown
COG id: COG4804
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789614, Length=342, Percent_Identity=30.7017543859649, Blast_Score=157, Evalue=7e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009362 [H]
Pfam domain/function: PF06250 DUF1016 [H]
EC number: NA
Molecular weight: Translated: 41209; Mature: 41209
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKIVERNFMTKVIAKEYTEFLEQLKEQIATSRYKAALAVNSKLIVLYHHIGTEILKRQK CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEEEEHHHHHHHHHHHH EHGWGAKIIDQLSRDLRDAFPDMKGFSIQNLKYMRRFAEEYSENEIGQQAVDQLPWGHNI HCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE VIMYEVKNKEERFWYIKKSCEHGWSRNILSMQIETNLYKREGKAITNFRNNLISPQSDLA EEEEEECCCCCCEEEEHHHHCCCCCCCEEEEEEHHHHHHHCCCHHHHHHHCCCCCHHHHH QQTLKNPYVFDFLSLGKKAHEREIEKALVAHIERFLLELGEGFAFLGRQYHLRVGDRDFY HHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEEECCCHHH LDLVFYHIKLRCYVVIELKAGKFRPEYTGKMNFYLSAVDDLLRQPGDNQSIGLILYRSKV HHHHHHHHEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCH GVIAEYALRDINKPIGLAEYRITENLPENIKTALPTIEELEAELSKVSDQEK HHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MIKIVERNFMTKVIAKEYTEFLEQLKEQIATSRYKAALAVNSKLIVLYHHIGTEILKRQK CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEEEEHHHHHHHHHHHH EHGWGAKIIDQLSRDLRDAFPDMKGFSIQNLKYMRRFAEEYSENEIGQQAVDQLPWGHNI HCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE VIMYEVKNKEERFWYIKKSCEHGWSRNILSMQIETNLYKREGKAITNFRNNLISPQSDLA EEEEEECCCCCCEEEEHHHHCCCCCCCEEEEEEHHHHHHHCCCHHHHHHHCCCCCHHHHH QQTLKNPYVFDFLSLGKKAHEREIEKALVAHIERFLLELGEGFAFLGRQYHLRVGDRDFY HHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEEECCCHHH LDLVFYHIKLRCYVVIELKAGKFRPEYTGKMNFYLSAVDDLLRQPGDNQSIGLILYRSKV HHHHHHHHEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCH GVIAEYALRDINKPIGLAEYRITENLPENIKTALPTIEELEAELSKVSDQEK HHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]