| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is uhpC [H]
Identifier: 225630358
GI number: 225630358
Start: 624586
End: 625731
Strand: Direct
Name: uhpC [H]
Synonym: WRi_005810
Alternate gene names: 225630358
Gene position: 624586-625731 (Clockwise)
Preceding gene: 225630357
Following gene: 225630366
Centisome position: 43.2
GC content: 30.98
Gene sequence:
>1146_bases ATGCTGCTTTATTTATCAAGACAAAGTATACCAATTGCTCTACCACTGTTAATAGATACTGACCATGTAAAATTAAGCTA TTTTTTTGCCTGCTTTTCTTTTTTTTATGGAGTATCAAAATTTGTTAATGGAATAATCATGGACTCCAAAAATAATCCAT TATTTATGTTTGGGCTATGCAATATTGCAACTGGATTATTAACCATTGGTATAACTTTATCATATAATAATCTAACTTTA TTACTGTTAACATTAATATTATTAGCTTGGACACAAGGGTTAGGTTGGCCAGCTATTACCAAGTTTATGGTTACAAACTC TAGCATCTCTTCAATTGCATCATCATGGGGAGTTATGAGCGCATCTCAGCAACTTGGTTCTTGTATTACTTTAATTGTAT TACCAAGTATAATTAAAATATATAATGCAAAAAGTGCATTTTTGTACTCTGGTTTCTTATGCTTACTTTTTGGAATTTAT ATAATATTAAAGGCATATTACAAAGAAAGTGCCAACTTTACTACCTATTATAAGGTGCAGAAATCTCAAATAGGTATCAA GGTAACAAGTTCCATATGGTTTCTATGTTGTGCTACTTTTTGTGCTTATATTATAAAAATGGGAATCTTCTTTTGGTTTC CTATAATTTTAAAGAATAAATTACAAATTTCTCTTGTACAATCCTCACTAATAACAGGCGTATATGATTTAGGTGGAATC CTTGGAACTTTAATAACAGGAAGAATTAGTGATATGTACTTCTTTCAAAATAGAAGCTTGCTGGCATCACTTTATATGTT GGGTATAGCACTCACTTTTATTGCAATGAACTTTGGTCAAAACATAATTCTTATGAACCTTTGTGCAATCTTATCAGGAT TCTTTATATTTGGAGTGCAAGTACTGACAGGTGTTATAGCTGTAGAAATTGCTCCACAAAATAATGTATGTGCAATTGTA AGCTTAACAGGATTATTTGGGTATATTGCAAGTTCAATATTTTCATGCGTGCTCTTAGGAGTACTTGTTAAGCACTGTGG TAACAGTATTATGTTTTCATTTTTTTCCATTTGCTCTGTTGTTGCACTCGTTTGCTTTTCCATACTATCAAGCAAAGATC TAAAAAAACTAAGTAAAGCGGTGTAA
Upstream 100 bases:
>100_bases ATTATACCAATATAGTATTATGCTAGCATCTGCATAGAGCTATTTGGGAATAGGTGTGAACTTTGTCTTCTTTCAATATT TACTATTCTTCTGTGGATAT
Downstream 100 bases:
>100_bases AAAAAATTTCTCAACAGTTAAACTTTGTAGATAGATTTTTTACCCAAGGAATAAACATGGTAACCATATCTTAGTAATAG CTCGCTATCTAATAAATTAC
Product: Major facilitator family transporter
Products: Proton [Cytoplasm]; glycerol-3-phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MLLYLSRQSIPIALPLLIDTDHVKLSYFFACFSFFYGVSKFVNGIIMDSKNNPLFMFGLCNIATGLLTIGITLSYNNLTL LLLTLILLAWTQGLGWPAITKFMVTNSSISSIASSWGVMSASQQLGSCITLIVLPSIIKIYNAKSAFLYSGFLCLLFGIY IILKAYYKESANFTTYYKVQKSQIGIKVTSSIWFLCCATFCAYIIKMGIFFWFPIILKNKLQISLVQSSLITGVYDLGGI LGTLITGRISDMYFFQNRSLLASLYMLGIALTFIAMNFGQNIILMNLCAILSGFFIFGVQVLTGVIAVEIAPQNNVCAIV SLTGLFGYIASSIFSCVLLGVLVKHCGNSIMFSFFSICSVVALVCFSILSSKDLKKLSKAV
Sequences:
>Translated_381_residues MLLYLSRQSIPIALPLLIDTDHVKLSYFFACFSFFYGVSKFVNGIIMDSKNNPLFMFGLCNIATGLLTIGITLSYNNLTL LLLTLILLAWTQGLGWPAITKFMVTNSSISSIASSWGVMSASQQLGSCITLIVLPSIIKIYNAKSAFLYSGFLCLLFGIY IILKAYYKESANFTTYYKVQKSQIGIKVTSSIWFLCCATFCAYIIKMGIFFWFPIILKNKLQISLVQSSLITGVYDLGGI LGTLITGRISDMYFFQNRSLLASLYMLGIALTFIAMNFGQNIILMNLCAILSGFFIFGVQVLTGVIAVEIAPQNNVCAIV SLTGLFGYIASSIFSCVLLGVLVKHCGNSIMFSFFSICSVVALVCFSILSSKDLKKLSKAV >Mature_381_residues MLLYLSRQSIPIALPLLIDTDHVKLSYFFACFSFFYGVSKFVNGIIMDSKNNPLFMFGLCNIATGLLTIGITLSYNNLTL LLLTLILLAWTQGLGWPAITKFMVTNSSISSIASSWGVMSASQQLGSCITLIVLPSIIKIYNAKSAFLYSGFLCLLFGIY IILKAYYKESANFTTYYKVQKSQIGIKVTSSIWFLCCATFCAYIIKMGIFFWFPIILKNKLQISLVQSSLITGVYDLGGI LGTLITGRISDMYFFQNRSLLASLYMLGIALTFIAMNFGQNIILMNLCAILSGFFIFGVQVLTGVIAVEIAPQNNVCAIV SLTGLFGYIASSIFSCVLLGVLVKHCGNSIMFSFFSICSVVALVCFSILSSKDLKKLSKAV
Specific function: Transport protein for sugar phosphate uptake [H]
COG id: COG2271
COG function: function code G; Sugar phosphate permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Organophosphate:Pi antiporter (OPA) (TC 2.A.1.4) family [H]
Homologues:
Organism=Homo sapiens, GI256219598, Length=426, Percent_Identity=23.2394366197183, Blast_Score=67, Evalue=4e-11, Organism=Homo sapiens, GI4503847, Length=426, Percent_Identity=23.2394366197183, Blast_Score=67, Evalue=4e-11, Organism=Homo sapiens, GI256219483, Length=426, Percent_Identity=23.2394366197183, Blast_Score=67, Evalue=4e-11, Organism=Escherichia coli, GI1788573, Length=407, Percent_Identity=26.5356265356265, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI87082310, Length=388, Percent_Identity=25, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI2367259, Length=274, Percent_Identity=26.2773722627737, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000849 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR021159 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 41868; Mature: 41868
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLYLSRQSIPIALPLLIDTDHVKLSYFFACFSFFYGVSKFVNGIIMDSKNNPLFMFGLC CEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEEEEHH NIATGLLTIGITLSYNNLTLLLLTLILLAWTQGLGWPAITKFMVTNSSISSIASSWGVMS HHHHHHHHHEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHCCHHH ASQQLGSCITLIVLPSIIKIYNAKSAFLYSGFLCLLFGIYIILKAYYKESANFTTYYKVQ HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE KSQIGIKVTSSIWFLCCATFCAYIIKMGIFFWFPIILKNKLQISLVQSSLITGVYDLGGI HHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LGTLITGRISDMYFFQNRSLLASLYMLGIALTFIAMNFGQNIILMNLCAILSGFFIFGVQ HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH VLTGVIAVEIAPQNNVCAIVSLTGLFGYIASSIFSCVLLGVLVKHCGNSIMFSFFSICSV HHHHHHEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH VALVCFSILSSKDLKKLSKAV HHHHHHHHHCCHHHHHHHHCC >Mature Secondary Structure MLLYLSRQSIPIALPLLIDTDHVKLSYFFACFSFFYGVSKFVNGIIMDSKNNPLFMFGLC CEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEEEEHH NIATGLLTIGITLSYNNLTLLLLTLILLAWTQGLGWPAITKFMVTNSSISSIASSWGVMS HHHHHHHHHEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHCCHHH ASQQLGSCITLIVLPSIIKIYNAKSAFLYSGFLCLLFGIYIILKAYYKESANFTTYYKVQ HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE KSQIGIKVTSSIWFLCCATFCAYIIKMGIFFWFPIILKNKLQISLVQSSLITGVYDLGGI HHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LGTLITGRISDMYFFQNRSLLASLYMLGIALTFIAMNFGQNIILMNLCAILSGFFIFGVQ HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH VLTGVIAVEIAPQNNVCAIVSLTGLFGYIASSIFSCVLLGVLVKHCGNSIMFSFFSICSV HHHHHHEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH VALVCFSILSSKDLKKLSKAV HHHHHHHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; glycerol-3-phosphate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + glycerol-3-phosphate [Periplasm] = Proton [Cytoplasm] + glycerol-3-phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]