| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630352
Identifier: 225630352
GI number: 225630352
Start: 615598
End: 617934
Strand: Direct
Name: 225630352
Synonym: WRi_005750
Alternate gene names: NA
Gene position: 615598-617934 (Clockwise)
Preceding gene: 225630351
Following gene: 225630353
Centisome position: 42.58
GC content: 33.63
Gene sequence:
>2337_bases ATGAAAATATTAAAAGTTATTCATGGTTACCCTCCTTATTATAGCGCTGGTTCGGAGGTTTACAGCCAAACTCTTGCCCA TGAACTAGCCAATAATAATGAGGTACAAATATTTACTAGGCATGAAAACAGCTTCTTACCTGATTTCCATTATACTATAG CTCTGGACTGTAGTGATTCCCGGATCTTACTGAATTTAATTAATATACCTACAACTAAATATCGTTACAAATTTATCAAT GAAGAAGTAAATATAAAATTTAAAAGAATAATAGATAACTTTCAACCAGATCTTATACATTTTGGTCATCTTAATCATCT ATCAATTACTTTACCAGAAGTTGCTTTTAAAGAAAATATACCTACAATTTTTACGCTACATGATTTTTGGTTAATGTGTC CAAGAGGAAGATTTATTCAACGTAATTCTGAAGATTTGTTACGGCTTTGTGATGGACAGAAGGATCAAAAATGTGCAACC CAATGTTACAAGGGGCATTTTACAGGAGATGAAGAATTCTTGAATTCAGACTTAAATTATTGGGAACAATGGGTTGCAAC TAGAATGAAGCAAACAAAGAAAGTAGTGGACTATATAGATTACTTCATTGCTCCGTCAAAATTCTTAATGGATAAATTTA CTCAAGACTTTAATGTTCCGATAAACAAAATTTCTTATCTTGATTATGGTTTTGATCTAAATCGTCTTAAGAATAGAAAT AGGGTGCAAGAAAAAGGGTTTATTTTCGGTTATATAGGTACTCATACTCCCGAGAAAGGTGTTGACCTATTATTGAAGGC TTTTTCTCGCTTATCATCTAAAGCAAAACTTAGAATTTGGGGAGCGGCAAGGGAAGAAACTAAAACTTTAAAAGCGATTG CCGATCAGTTTCCACATGCTGTTAAAGAAAGGATAGAATGGATGGGAAGTTATAACAATAAAAATATAGTTACTGATGTA TTTAATAAAGTTGATGCGATAGTTGTTCCTTCAATTTGGGGTGAAAATTCACCATTAGTAATACATGAAGCACAGCAACT GAGTGTACCAGTAATAACGGCTGATTATGGTGGCATGGCAGAATATGTAAGAGATGGAATAAACGGACTATTATTTAAGC ATAGAGATACAAATAGTTTGTCAGAAAAAATGCAAGTCCTATCTACAGACCAGGAATTATACAGTGAACTGACCCAAAGA GGCTATCTTTATACTAAAAATGGTAATGTACCTTCTATAAGTGAGCATACTGAGAAACTTAACAAAATTTACCGTAATGT TATTGAAAATAAAGGCAAATCAGTGGCTACAAAACCTGGTCCTTGGAGAATTACTTTTGATACTAATCCAGATTACTGCA ACTTTGCTTGTGTAATGTGTGAATGCTTTTCACCATATAGTAAAGTTAAAGAGGAGAAGAAAGCTAAAGGGATAAAACCC AAGATAATGTCAATAGAAACTATCAGGAAGGTAATTAAGGAAGCAGATGGAACACCTTTAAGGGAAATCATTCCTTCTAC TATGGGTGAGCCTTTAATGTATAAAAGCTTTGATGAAATAATCAATTTGTGCCATGAGTTCGGCCTGAAGCTTAACCTCA CGACCAATGGTTCTTTTCCTATTAAAGGAGCTAGAAAATGGGCTGAACTATTGGTACCAATTTTATCTGATGTTAAGATT TCCTGGAATGGGGCAACTAAAGAAACTCATGAAAGAATCATGAAAGGTTCAAAATGGGAAGTAGTGACAGAAAATTTAAA AACTTTCCTTGAAGTTAGAGATAAATACTTTAGCGATACAGGTGAAAGGTGTACCGTTACTTTACAATTAACATTTTTAG AAAGTAATTTACATGAACTTTACGACATAGTTGAGATGGCTATAAAAAATGGCATAGATAGAGTTAAAGGACATCATCTT TGGGCACATTTTAAGGAAATTAAGGATCTATCTATGAGGAGAGATGAATTAGCAATTAGTAGATGGAATACGGAGGTGGG AAGGTTATATGAACTTAGGGATAATATGCTATTGCCAAATGGTAAAAAGATAAAATTAGAAAATTTTACGATCCTTTCTC AAGAGGGTATCAAGGATTTGGCTCCAGGTGGTCAGTGCCCATTTTTAGGTAAAGAAGCATGGATAAACAATGAAGGCAAG TTTAGTCCCTGCTGTGCTCCAGATGAACTACGCAAAACATTAGGAGATTTTGGCAATGTTAATGAAGTTAAACTGGAGGA AATATGGCAAAGTAGCGAGTACCTAAACTTACAAAAGAATTATTTAAACTATGAATTATGCAAAACATGCAACATGAGAA AACCATTAGTCAATTAA
Upstream 100 bases:
>100_bases TGGTCTCCAAAGCATTCATTAAAAGTAGGATTAGGTAAATTTATAAAAAGTCTACAAAACAATACACAAGAATATCCTAA CAATATAGATATGGTAATAT
Downstream 100 bases:
>100_bases TGAAAGATAGTGAGTACCTTAAATCTATTAGGGTTTCCCCCTGTGAAAGGTTTCACCAATTGTCAGAAAATCCTTTGTAC AAAAATAGATTTATTAGAGT
Product: glycosyl transferase, group 1 family protein / moaA/nifB/pqqE family protein
Products: NA
Alternate protein names: Glycosyl Transferase Group 1 Family Protein; Group 1 Glycosyl Transferase; Lipopolysaccharide N-Acetylglucosaminyltransferase; Glycosyltransferase Protein; Hexosyltransferase; Glycosyl Transferase Family Protein; Capsular Polysaccharide Bisynthesis Glycosyl Transferase; LPS Biosynthesis RfbU Related Protein; Transposase; Transferase; Glycosyl Transferase Gt4C; Radical SAM Domain Protein; Radical SAM Domain-Containing Protein; Lipopolysaccharide N-Acetyl-Glycoaminyltransferase; Glycosyl Transferase GT4 Family Protein; Radical SAM Family Protein; Glycosyltransferase Forming Alpha Glycosyl Linkages; Glycosyl Transferase
Number of amino acids: Translated: 778; Mature: 778
Protein sequence:
>778_residues MKILKVIHGYPPYYSAGSEVYSQTLAHELANNNEVQIFTRHENSFLPDFHYTIALDCSDSRILLNLINIPTTKYRYKFIN EEVNIKFKRIIDNFQPDLIHFGHLNHLSITLPEVAFKENIPTIFTLHDFWLMCPRGRFIQRNSEDLLRLCDGQKDQKCAT QCYKGHFTGDEEFLNSDLNYWEQWVATRMKQTKKVVDYIDYFIAPSKFLMDKFTQDFNVPINKISYLDYGFDLNRLKNRN RVQEKGFIFGYIGTHTPEKGVDLLLKAFSRLSSKAKLRIWGAAREETKTLKAIADQFPHAVKERIEWMGSYNNKNIVTDV FNKVDAIVVPSIWGENSPLVIHEAQQLSVPVITADYGGMAEYVRDGINGLLFKHRDTNSLSEKMQVLSTDQELYSELTQR GYLYTKNGNVPSISEHTEKLNKIYRNVIENKGKSVATKPGPWRITFDTNPDYCNFACVMCECFSPYSKVKEEKKAKGIKP KIMSIETIRKVIKEADGTPLREIIPSTMGEPLMYKSFDEIINLCHEFGLKLNLTTNGSFPIKGARKWAELLVPILSDVKI SWNGATKETHERIMKGSKWEVVTENLKTFLEVRDKYFSDTGERCTVTLQLTFLESNLHELYDIVEMAIKNGIDRVKGHHL WAHFKEIKDLSMRRDELAISRWNTEVGRLYELRDNMLLPNGKKIKLENFTILSQEGIKDLAPGGQCPFLGKEAWINNEGK FSPCCAPDELRKTLGDFGNVNEVKLEEIWQSSEYLNLQKNYLNYELCKTCNMRKPLVN
Sequences:
>Translated_778_residues MKILKVIHGYPPYYSAGSEVYSQTLAHELANNNEVQIFTRHENSFLPDFHYTIALDCSDSRILLNLINIPTTKYRYKFIN EEVNIKFKRIIDNFQPDLIHFGHLNHLSITLPEVAFKENIPTIFTLHDFWLMCPRGRFIQRNSEDLLRLCDGQKDQKCAT QCYKGHFTGDEEFLNSDLNYWEQWVATRMKQTKKVVDYIDYFIAPSKFLMDKFTQDFNVPINKISYLDYGFDLNRLKNRN RVQEKGFIFGYIGTHTPEKGVDLLLKAFSRLSSKAKLRIWGAAREETKTLKAIADQFPHAVKERIEWMGSYNNKNIVTDV FNKVDAIVVPSIWGENSPLVIHEAQQLSVPVITADYGGMAEYVRDGINGLLFKHRDTNSLSEKMQVLSTDQELYSELTQR GYLYTKNGNVPSISEHTEKLNKIYRNVIENKGKSVATKPGPWRITFDTNPDYCNFACVMCECFSPYSKVKEEKKAKGIKP KIMSIETIRKVIKEADGTPLREIIPSTMGEPLMYKSFDEIINLCHEFGLKLNLTTNGSFPIKGARKWAELLVPILSDVKI SWNGATKETHERIMKGSKWEVVTENLKTFLEVRDKYFSDTGERCTVTLQLTFLESNLHELYDIVEMAIKNGIDRVKGHHL WAHFKEIKDLSMRRDELAISRWNTEVGRLYELRDNMLLPNGKKIKLENFTILSQEGIKDLAPGGQCPFLGKEAWINNEGK FSPCCAPDELRKTLGDFGNVNEVKLEEIWQSSEYLNLQKNYLNYELCKTCNMRKPLVN >Mature_778_residues MKILKVIHGYPPYYSAGSEVYSQTLAHELANNNEVQIFTRHENSFLPDFHYTIALDCSDSRILLNLINIPTTKYRYKFIN EEVNIKFKRIIDNFQPDLIHFGHLNHLSITLPEVAFKENIPTIFTLHDFWLMCPRGRFIQRNSEDLLRLCDGQKDQKCAT QCYKGHFTGDEEFLNSDLNYWEQWVATRMKQTKKVVDYIDYFIAPSKFLMDKFTQDFNVPINKISYLDYGFDLNRLKNRN RVQEKGFIFGYIGTHTPEKGVDLLLKAFSRLSSKAKLRIWGAAREETKTLKAIADQFPHAVKERIEWMGSYNNKNIVTDV FNKVDAIVVPSIWGENSPLVIHEAQQLSVPVITADYGGMAEYVRDGINGLLFKHRDTNSLSEKMQVLSTDQELYSELTQR GYLYTKNGNVPSISEHTEKLNKIYRNVIENKGKSVATKPGPWRITFDTNPDYCNFACVMCECFSPYSKVKEEKKAKGIKP KIMSIETIRKVIKEADGTPLREIIPSTMGEPLMYKSFDEIINLCHEFGLKLNLTTNGSFPIKGARKWAELLVPILSDVKI SWNGATKETHERIMKGSKWEVVTENLKTFLEVRDKYFSDTGERCTVTLQLTFLESNLHELYDIVEMAIKNGIDRVKGHHL WAHFKEIKDLSMRRDELAISRWNTEVGRLYELRDNMLLPNGKKIKLENFTILSQEGIKDLAPGGQCPFLGKEAWINNEGK FSPCCAPDELRKTLGDFGNVNEVKLEEIWQSSEYLNLQKNYLNYELCKTCNMRKPLVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89977; Mature: 89977
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILKVIHGYPPYYSAGSEVYSQTLAHELANNNEVQIFTRHENSFLPDFHYTIALDCSDS CCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEECCCC RILLNLINIPTTKYRYKFINEEVNIKFKRIIDNFQPDLIHFGHLNHLSITLPEVAFKENI EEEEEEECCCCCCEEEEEECCCCCEEHHHHHCCCCCCEEEECCCCCEEEECCCHHHHCCC PTIFTLHDFWLMCPRGRFIQRNSEDLLRLCDGQKDQKCATQCYKGHFTGDEEFLNSDLNY CEEEEECHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHH WEQWVATRMKQTKKVVDYIDYFIAPSKFLMDKFTQDFNVPINKISYLDYGFDLNRLKNRN HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHEEEEECCCCHHHHHCCC RVQEKGFIFGYIGTHTPEKGVDLLLKAFSRLSSKAKLRIWGAAREETKTLKAIADQFPHA HHHHCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHH VKERIEWMGSYNNKNIVTDVFNKVDAIVVPSIWGENSPLVIHEAQQLSVPVITADYGGMA HHHHHHHHCCCCCCCHHHHHHHCCCEEEEECCCCCCCCEEEEEHHHCCCCEEECCCCCHH EYVRDGINGLLFKHRDTNSLSEKMQVLSTDQELYSELTQRGYLYTKNGNVPSISEHTEKL HHHHHCCHHEEEECCCCHHHHHHHHHHCCHHHHHHHHHHCCEEEECCCCCCCHHHHHHHH NKIYRNVIENKGKSVATKPGPWRITFDTNPDYCNFACVMCECFSPYSKVKEEKKAKGIKP HHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCC KIMSIETIRKVIKEADGTPLREIIPSTMGEPLMYKSFDEIINLCHEFGLKLNLTTNGSFP HHCCHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCC IKGARKWAELLVPILSDVKISWNGATKETHERIMKGSKWEVVTENLKTFLEVRDKYFSDT CCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC GERCTVTLQLTFLESNLHELYDIVEMAIKNGIDRVKGHHLWAHFKEIKDLSMRRDELAIS CCEEEEEEEEEEEHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHH RWNTEVGRLYELRDNMLLPNGKKIKLENFTILSQEGIKDLAPGGQCPFLGKEAWINNEGK HCCCHHHHHHHHHCCEECCCCCEEEEECEEEECCCCHHHCCCCCCCCCCCCHHEECCCCC FSPCCAPDELRKTLGDFGNVNEVKLEEIWQSSEYLNLQKNYLNYELCKTCNMRKPLVN CCCCCCHHHHHHHHHCCCCCCCEEHHHHHCCCHHHHHHHHHCCHHHHHHCCCCCCCCC >Mature Secondary Structure MKILKVIHGYPPYYSAGSEVYSQTLAHELANNNEVQIFTRHENSFLPDFHYTIALDCSDS CCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEECCCC RILLNLINIPTTKYRYKFINEEVNIKFKRIIDNFQPDLIHFGHLNHLSITLPEVAFKENI EEEEEEECCCCCCEEEEEECCCCCEEHHHHHCCCCCCEEEECCCCCEEEECCCHHHHCCC PTIFTLHDFWLMCPRGRFIQRNSEDLLRLCDGQKDQKCATQCYKGHFTGDEEFLNSDLNY CEEEEECHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHH WEQWVATRMKQTKKVVDYIDYFIAPSKFLMDKFTQDFNVPINKISYLDYGFDLNRLKNRN HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHEEEEECCCCHHHHHCCC RVQEKGFIFGYIGTHTPEKGVDLLLKAFSRLSSKAKLRIWGAAREETKTLKAIADQFPHA HHHHCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHH VKERIEWMGSYNNKNIVTDVFNKVDAIVVPSIWGENSPLVIHEAQQLSVPVITADYGGMA HHHHHHHHCCCCCCCHHHHHHHCCCEEEEECCCCCCCCEEEEEHHHCCCCEEECCCCCHH EYVRDGINGLLFKHRDTNSLSEKMQVLSTDQELYSELTQRGYLYTKNGNVPSISEHTEKL HHHHHCCHHEEEECCCCHHHHHHHHHHCCHHHHHHHHHHCCEEEECCCCCCCHHHHHHHH NKIYRNVIENKGKSVATKPGPWRITFDTNPDYCNFACVMCECFSPYSKVKEEKKAKGIKP HHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCC KIMSIETIRKVIKEADGTPLREIIPSTMGEPLMYKSFDEIINLCHEFGLKLNLTTNGSFP HHCCHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCC IKGARKWAELLVPILSDVKISWNGATKETHERIMKGSKWEVVTENLKTFLEVRDKYFSDT CCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC GERCTVTLQLTFLESNLHELYDIVEMAIKNGIDRVKGHHLWAHFKEIKDLSMRRDELAIS CCEEEEEEEEEEEHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHH RWNTEVGRLYELRDNMLLPNGKKIKLENFTILSQEGIKDLAPGGQCPFLGKEAWINNEGK HCCCHHHHHHHHHCCEECCCCCEEEEECEEEECCCCHHHCCCCCCCCCCCCHHEECCCCC FSPCCAPDELRKTLGDFGNVNEVKLEEIWQSSEYLNLQKNYLNYELCKTCNMRKPLVN CCCCCCHHHHHHHHHCCCCCCCEEHHHHHCCCHHHHHHHHHCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA