| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630244
Identifier: 225630244
GI number: 225630244
Start: 493117
End: 493620
Strand: Reverse
Name: 225630244
Synonym: WRi_004580
Alternate gene names: NA
Gene position: 493620-493117 (Counterclockwise)
Preceding gene: 225630245
Following gene: 225630242
Centisome position: 34.14
GC content: 30.75
Gene sequence:
>504_bases ATGAAAATACATATATATTTAATATTGTTTTTATTTTTTTCTTGCACTCAACTATATGCTGACGAGGAAATTGCAAAATT TGATTTACTTATTGGCGAGATAAATGAAGCAAGCTTCACTCTTAAAGGTGCAATAAAGGTTACAGTAGAACCAGGCTGGC ACATATATTATAAAGATCCTGGAGATTTTGGCCTTCCCACGTCTATTAGTTACGAAGGTAATGCATCAGATATAAATATT CACTGGCCTATTCCAAAGGAACATAAAGATAAAGTAGGGAGAGAGACGTTTGTAAGTAACGTATATGAGGATATGGTATT ATTTCCCTTTAAGATGAATATATTTTTAAATCAAGGGTATATTGACCTTAACTTCCATATAAATTATGCGATATGTAAAG ATAGGTGCATCCCTAAAAATGTTGAGATAAAAATCAGGCAACCATTAAAGGATTTTATAGATTCTGATATCAATAAACTT ATAAATGAGTGGTATGAAAAATAG
Upstream 100 bases:
>100_bases TATAGCATAATGCTATATTAATAAATAATCTATATAATACTATTAAATATAATAATTAAAATCTAAATTACTTTCTCTAT AAAAGGAGAAATTTACCTTA
Downstream 100 bases:
>100_bases AGTTCTCATGGGGTAGGTGTCATTCCAGCGCGTGACACTGGAATCTCATTTACTTTTTTGTTCACTATGTGAGGAACTTG GGCCTACAAGTATATAAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MKIHIYLILFLFFSCTQLYADEEIAKFDLLIGEINEASFTLKGAIKVTVEPGWHIYYKDPGDFGLPTSISYEGNASDINI HWPIPKEHKDKVGRETFVSNVYEDMVLFPFKMNIFLNQGYIDLNFHINYAICKDRCIPKNVEIKIRQPLKDFIDSDINKL INEWYEK
Sequences:
>Translated_167_residues MKIHIYLILFLFFSCTQLYADEEIAKFDLLIGEINEASFTLKGAIKVTVEPGWHIYYKDPGDFGLPTSISYEGNASDINI HWPIPKEHKDKVGRETFVSNVYEDMVLFPFKMNIFLNQGYIDLNFHINYAICKDRCIPKNVEIKIRQPLKDFIDSDINKL INEWYEK >Mature_167_residues MKIHIYLILFLFFSCTQLYADEEIAKFDLLIGEINEASFTLKGAIKVTVEPGWHIYYKDPGDFGLPTSISYEGNASDINI HWPIPKEHKDKVGRETFVSNVYEDMVLFPFKMNIFLNQGYIDLNFHINYAICKDRCIPKNVEIKIRQPLKDFIDSDINKL INEWYEK
Specific function: Unknown
COG id: COG4233
COG function: function code OC; Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19591; Mature: 19591
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIHIYLILFLFFSCTQLYADEEIAKFDLLIGEINEASFTLKGAIKVTVEPGWHIYYKDP CEEEEEEHHHHHHHHHHHHCCCHHHEEEEEEECCCCCEEEEEEEEEEEECCCEEEEEECC GDFGLPTSISYEGNASDINIHWPIPKEHKDKVGRETFVSNVYEDMVLFPFKMNIFLNQGY CCCCCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCE IDLNFHINYAICKDRCIPKNVEIKIRQPLKDFIDSDINKLINEWYEK EEEEEEEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKIHIYLILFLFFSCTQLYADEEIAKFDLLIGEINEASFTLKGAIKVTVEPGWHIYYKDP CEEEEEEHHHHHHHHHHHHCCCHHHEEEEEEECCCCCEEEEEEEEEEEECCCEEEEEECC GDFGLPTSISYEGNASDINIHWPIPKEHKDKVGRETFVSNVYEDMVLFPFKMNIFLNQGY CCCCCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCE IDLNFHINYAICKDRCIPKNVEIKIRQPLKDFIDSDINKLINEWYEK EEEEEEEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA