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The map label for this gene is rpmJ

Identifier: 225630234

GI number: 225630234

Start: 477722

End: 477850

Strand: Reverse

Name: rpmJ

Synonym: WRi_004460

Alternate gene names: 225630234

Gene position: 477850-477722 (Counterclockwise)

Preceding gene: 225630235

Following gene: 225630233

Centisome position: 33.05

GC content: 35.66

Gene sequence:

>129_bases
ATGAAAGTCAAAGGGTCGCTAAAATCTCATCGTAACAGAGATAAAAATTGTAAAGTTGTGAAAAGGGGTGGTAAGATTTA
CATTATAAATAAGGTAAAGCCAAGGTGTAAAGCGCGTCAAGGTTCTTAG

Upstream 100 bases:

>100_bases
GTATCAGCAACAATTATACAATATTTTAATAAAATGTTATCAATTGACTAACTCTTGATAAGTGATTATAATGTAAAGTA
ATTTAATTCTTACTATAGAT

Downstream 100 bases:

>100_bases
CTTTTTGTTCACCTTTTCATGTTATATATTTTTTATATGTGAAAGTACGGTGCTTATATCTAAAAAGAAGCAAAAGTTAC
TGTGTTTAAGCGCAGCCTTA

Product: 50S ribosomal protein L36

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 42; Mature: 42

Protein sequence:

>42_residues
MKVKGSLKSHRNRDKNCKVVKRGGKIYIINKVKPRCKARQGS

Sequences:

>Translated_42_residues
MKVKGSLKSHRNRDKNCKVVKRGGKIYIINKVKPRCKARQGS
>Mature_42_residues
MKVKGSLKSHRNRDKNCKVVKRGGKIYIINKVKPRCKARQGS

Specific function: Unknown

COG id: COG0257

COG function: function code J; Ribosomal protein L36

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L36P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL36_WOLPM (Q73I40)

Other databases:

- EMBL:   AE017196
- RefSeq:   NP_966138.1
- ProteinModelPortal:   Q73I40
- SMR:   Q73I40
- EnsemblBacteria:   EBWOLT00000004518
- GeneID:   2738461
- GenomeReviews:   AE017196_GR
- KEGG:   wol:WD0342
- TIGR:   WD_0342
- GeneTree:   EBGT00050000031288
- HOGENOM:   HBG734088
- ProtClustDB:   PRK00831
- BioCyc:   WPIP955:WD_0342-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00251
- InterPro:   IPR000473
- TIGRFAMs:   TIGR01022

Pfam domain/function: PF00444 Ribosomal_L36; SSF57840 Ribosomal_L36

EC number: NA

Molecular weight: Translated: 4811; Mature: 4811

Theoretical pI: Translated: 11.83; Mature: 11.83

Prosite motif: PS00828 RIBOSOMAL_L36

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVKGSLKSHRNRDKNCKVVKRGGKIYIINKVKPRCKARQGS
CCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MKVKGSLKSHRNRDKNCKVVKRGGKIYIINKVKPRCKARQGS
CCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA