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The map label for this gene is yfjD [C]

Identifier: 225630182

GI number: 225630182

Start: 404755

End: 406038

Strand: Reverse

Name: yfjD [C]

Synonym: WRi_003780

Alternate gene names: 225630182

Gene position: 406038-404755 (Counterclockwise)

Preceding gene: 225630183

Following gene: 225630181

Centisome position: 28.08

GC content: 34.5

Gene sequence:

>1284_bases
ATGGATTGGTTATTGGTCTTAGTATCATCAGCAATTTTTGTTTTGTTAGTTTTATCGTTTTTGTTCTCAGGAGCAGAAAT
AGGCTTAACCTCAATTAGCCGTTCTCGAGTTAATAAGCTAAAGCTAGACGGTAACAAAAAAGCCAGGGTAATAGATCGCT
TATTAAATAGGAAAGAATTGACAATAGGAACGGTATTGCTCGGCAATACAATTATTAATATTACTTGCTCTGCTTTATTT
ACAGCAATATTTATCAATCTTTTTGGAAATGAGGGCATTCTCCTATCAACAATTATAATGACATTTTGTATTTTATTGTT
CTGCGAAGTTCTACCAAAAACTTATGCTATTCAAAATCCTGAAAAATTTGCATCATTTTCTGCTTATTTTGTATTGTTTT
TTGTAAAGATTTTTTCTCCATTGACACTAGGTATTCAATTTATTGTTAACCTCATCCTAAAATTATGTGGGCTGCATAAA
GATAAGGAAGTGATATCTGCAGCGGATGCAATGCGTAATATGATTACTCTTCACCGCAGTGAAGGAACTATGTTGCAACA
GGATTTAGATATGCTAAGCAGCATACTTGATTTGGCTGAGACAGAGATATCACAAATTATGACCCATAGAAGAAACCTAT
TTTCTCTTGATATAGATCGGAATAAAGAAGAGTTAATAAGAGAGATTTTAACCAGCAGTCACAGTAGAGTACCTTTATGG
CAGAAGGAACCAGATAACATTGTAGGTGTAATTCACGTGAAAGCTCTAATAAATGCTTTGCGTGAAAAGAATAATAAAGC
GGAAGAAGTTGACATTACCCAAGTTATGTCAAGGCCTTGGTTCATACCAGAAAGTACACCGCTCAGCGTGCAACTTCACA
ACTTCCGTAAGAACAGGAAACACCTTGCATTTGTTATTGATGAGTATGGAGCACTGCAGGGAATTGTAACTCTTGAGGAT
ATACTGGAAGAAATAGTTGGAGAAATTTCGGATGAACATGATTTGATTACGGAGAATTTTATAAAGAAAATATCTGATAA
TATGTATCACATAGAAGGAAAATCTACTATTAGGGACATTAACAGGCAGTTATACTGGAATCTCCCTGATGAAGAAGCTA
CAACTCTAGCAGGTATGATTGTGAATGAAATAGAGCGCATTCCTGACGAAGGCGAGGAGTTTTCCATGTATGGTTTTCGC
TTTAAGATTTTAAAAAAAGATAAAAATATTATTACTGTTGTTGAAGTGCAAGTAAAAACTGGTAATATTAGTGGCAGCAA
TTAA

Upstream 100 bases:

>100_bases
AAAGGTATATAAAATTCGGCAATATAAATTCAGGCTTGCAAATGCCTCTCATAACATGTAAAATTAATTTTATTTTTTAT
CACAATAACATCGTACTTTA

Downstream 100 bases:

>100_bases
TTAGTGGAGTTTTATGGAAGATACAGTAAAAATAACGGCTGAAGAGTTGAAGGGTTACATAGAGAGAATCGAAAAACTTG
AACAAGAAAAGAGGGATGTG

Product: Putative Mg2+ and Co2+ transporter CorB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MDWLLVLVSSAIFVLLVLSFLFSGAEIGLTSISRSRVNKLKLDGNKKARVIDRLLNRKELTIGTVLLGNTIINITCSALF
TAIFINLFGNEGILLSTIIMTFCILLFCEVLPKTYAIQNPEKFASFSAYFVLFFVKIFSPLTLGIQFIVNLILKLCGLHK
DKEVISAADAMRNMITLHRSEGTMLQQDLDMLSSILDLAETEISQIMTHRRNLFSLDIDRNKEELIREILTSSHSRVPLW
QKEPDNIVGVIHVKALINALREKNNKAEEVDITQVMSRPWFIPESTPLSVQLHNFRKNRKHLAFVIDEYGALQGIVTLED
ILEEIVGEISDEHDLITENFIKKISDNMYHIEGKSTIRDINRQLYWNLPDEEATTLAGMIVNEIERIPDEGEEFSMYGFR
FKILKKDKNIITVVEVQVKTGNISGSN

Sequences:

>Translated_427_residues
MDWLLVLVSSAIFVLLVLSFLFSGAEIGLTSISRSRVNKLKLDGNKKARVIDRLLNRKELTIGTVLLGNTIINITCSALF
TAIFINLFGNEGILLSTIIMTFCILLFCEVLPKTYAIQNPEKFASFSAYFVLFFVKIFSPLTLGIQFIVNLILKLCGLHK
DKEVISAADAMRNMITLHRSEGTMLQQDLDMLSSILDLAETEISQIMTHRRNLFSLDIDRNKEELIREILTSSHSRVPLW
QKEPDNIVGVIHVKALINALREKNNKAEEVDITQVMSRPWFIPESTPLSVQLHNFRKNRKHLAFVIDEYGALQGIVTLED
ILEEIVGEISDEHDLITENFIKKISDNMYHIEGKSTIRDINRQLYWNLPDEEATTLAGMIVNEIERIPDEGEEFSMYGFR
FKILKKDKNIITVVEVQVKTGNISGSN
>Mature_427_residues
MDWLLVLVSSAIFVLLVLSFLFSGAEIGLTSISRSRVNKLKLDGNKKARVIDRLLNRKELTIGTVLLGNTIINITCSALF
TAIFINLFGNEGILLSTIIMTFCILLFCEVLPKTYAIQNPEKFASFSAYFVLFFVKIFSPLTLGIQFIVNLILKLCGLHK
DKEVISAADAMRNMITLHRSEGTMLQQDLDMLSSILDLAETEISQIMTHRRNLFSLDIDRNKEELIREILTSSHSRVPLW
QKEPDNIVGVIHVKALINALREKNNKAEEVDITQVMSRPWFIPESTPLSVQLHNFRKNRKHLAFVIDEYGALQGIVTLED
ILEEIVGEISDEHDLITENFIKKISDNMYHIEGKSTIRDINRQLYWNLPDEEATTLAGMIVNEIERIPDEGEEFSMYGFR
FKILKKDKNIITVVEVQVKTGNISGSN

Specific function: Unknown

COG id: COG4536

COG function: function code P; Putative Mg2+ and Co2+ transporter CorB

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=383, Percent_Identity=27.6762402088773, Blast_Score=142, Evalue=4e-34,
Organism=Homo sapiens, GI40068055, Length=359, Percent_Identity=27.5766016713092, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI40068053, Length=359, Percent_Identity=27.5766016713092, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI94681046, Length=340, Percent_Identity=25.5882352941176, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI40068051, Length=314, Percent_Identity=22.2929936305732, Blast_Score=74, Evalue=3e-13,
Organism=Escherichia coli, GI145693175, Length=396, Percent_Identity=32.0707070707071, Blast_Score=240, Evalue=1e-64,
Organism=Escherichia coli, GI1786879, Length=229, Percent_Identity=32.3144104803493, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI87082033, Length=270, Percent_Identity=27.7777777777778, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI1790664, Length=414, Percent_Identity=21.7391304347826, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI1788119, Length=343, Percent_Identity=23.3236151603499, Blast_Score=85, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71980512, Length=355, Percent_Identity=25.9154929577465, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17539402, Length=357, Percent_Identity=25.4901960784314, Blast_Score=82, Evalue=6e-16,
Organism=Saccharomyces cerevisiae, GI6324512, Length=342, Percent_Identity=24.8538011695906, Blast_Score=103, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 48561; Mature: 48561

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWLLVLVSSAIFVLLVLSFLFSGAEIGLTSISRSRVNKLKLDGNKKARVIDRLLNRKEL
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCCCC
TIGTVLLGNTIINITCSALFTAIFINLFGNEGILLSTIIMTFCILLFCEVLPKTYAIQNP
EEHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCH
EKFASFSAYFVLFFVKIFSPLTLGIQFIVNLILKLCGLHKDKEVISAADAMRNMITLHRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
EGTMLQQDLDMLSSILDLAETEISQIMTHRRNLFSLDIDRNKEELIREILTSSHSRVPLW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCC
QKEPDNIVGVIHVKALINALREKNNKAEEVDITQVMSRPWFIPESTPLSVQLHNFRKNRK
CCCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEHHHHCCCC
HLAFVIDEYGALQGIVTLEDILEEIVGEISDEHDLITENFIKKISDNMYHIEGKSTIRDI
CEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCHHHHHHH
NRQLYWNLPDEEATTLAGMIVNEIERIPDEGEEFSMYGFRFKILKKDKNIITVVEVQVKT
HHHHEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEHEEEEEEECCCCEEEEEEEEEEE
GNISGSN
CCCCCCC
>Mature Secondary Structure
MDWLLVLVSSAIFVLLVLSFLFSGAEIGLTSISRSRVNKLKLDGNKKARVIDRLLNRKEL
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCCCC
TIGTVLLGNTIINITCSALFTAIFINLFGNEGILLSTIIMTFCILLFCEVLPKTYAIQNP
EEHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCH
EKFASFSAYFVLFFVKIFSPLTLGIQFIVNLILKLCGLHKDKEVISAADAMRNMITLHRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
EGTMLQQDLDMLSSILDLAETEISQIMTHRRNLFSLDIDRNKEELIREILTSSHSRVPLW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCC
QKEPDNIVGVIHVKALINALREKNNKAEEVDITQVMSRPWFIPESTPLSVQLHNFRKNRK
CCCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEHHHHCCCC
HLAFVIDEYGALQGIVTLEDILEEIVGEISDEHDLITENFIKKISDNMYHIEGKSTIRDI
CEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCHHHHHHH
NRQLYWNLPDEEATTLAGMIVNEIERIPDEGEEFSMYGFRFKILKKDKNIITVVEVQVKT
HHHHEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEHEEEEEEECCCCEEEEEEEEEEE
GNISGSN
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]