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The map label for this gene is 225630177

Identifier: 225630177

GI number: 225630177

Start: 400865

End: 401338

Strand: Direct

Name: 225630177

Synonym: WRi_003730

Alternate gene names: NA

Gene position: 400865-401338 (Clockwise)

Preceding gene: 225630175

Following gene: 225630178

Centisome position: 27.72

GC content: 36.29

Gene sequence:

>474_bases
ATGAATAATCAGAATAAAAGTAAAGAAGAAAATAAACGTAAAAAAGAAATAGAGTTCAGAATATTGGCAAGCAAAGGAAA
TGCTTTACTAGATCATGAAATAATTGAAACGTTTCTAAGTGCAGTGCATGATAGGGCTCAGGCTCGAGCTATTGCTAAAA
ATCTAGTAACCACTTGTACAGGAATAGGAAGGATTTTAGGTCGCGAAATAGATGAGCTGAAAAGTGTAGAAGGTGTCACA
GACTCTACAGTTTCAATGATTTTTTGTGTTAAGGAAACTTTGACTAGAGTATTCAAGGAGGGGCTAAAAAAAGGGCCGAT
ACTAGATAACCTAGATAAGCTTATAGAATACTTAAGGGTGAGCATCGGCTATTCAGACAAGGAGAATATTACAATAATGT
ATTTGAATCAAGGGTGCCATTTGATAGGGGAAGAAGTATTTGCTGGCAGGCGCCTGTCTATACAAGGGAAATAA

Upstream 100 bases:

>100_bases
GATTTGACTTCACCCGTAAGCTATGTCTTCATGCCAATACTGCTAAGAAAATAACAGTGAACATTTAAAAAAAATTTATT
ATTAGTGAAGAGTATATTAT

Downstream 100 bases:

>100_bases
TAAAAAAAGCATTATTAAAAAATACAACATCAATCGTAATTTGTATTAAATAAGACTTGACCTGACACTTTAAAAAAGTA
AGTTAAAAATAATAAAAATA

Product: DNA repair protein RadC, putative

Products: NA

Alternate protein names: DNA Repair Protein Radc; DNA Repair Protein; DNA Repair Protein RadC-Like Protein; DNA Repair Protein RadC Truncation

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MNNQNKSKEENKRKKEIEFRILASKGNALLDHEIIETFLSAVHDRAQARAIAKNLVTTCTGIGRILGREIDELKSVEGVT
DSTVSMIFCVKETLTRVFKEGLKKGPILDNLDKLIEYLRVSIGYSDKENITIMYLNQGCHLIGEEVFAGRRLSIQGK

Sequences:

>Translated_157_residues
MNNQNKSKEENKRKKEIEFRILASKGNALLDHEIIETFLSAVHDRAQARAIAKNLVTTCTGIGRILGREIDELKSVEGVT
DSTVSMIFCVKETLTRVFKEGLKKGPILDNLDKLIEYLRVSIGYSDKENITIMYLNQGCHLIGEEVFAGRRLSIQGK
>Mature_157_residues
MNNQNKSKEENKRKKEIEFRILASKGNALLDHEIIETFLSAVHDRAQARAIAKNLVTTCTGIGRILGREIDELKSVEGVT
DSTVSMIFCVKETLTRVFKEGLKKGPILDNLDKLIEYLRVSIGYSDKENITIMYLNQGCHLIGEEVFAGRRLSIQGK

Specific function: Unknown

COG id: COG2003

COG function: function code L; DNA repair proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17682; Mature: 17682

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNQNKSKEENKRKKEIEFRILASKGNALLDHEIIETFLSAVHDRAQARAIAKNLVTTCT
CCCCCCCHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIGRILGREIDELKSVEGVTDSTVSMIFCVKETLTRVFKEGLKKGPILDNLDKLIEYLRV
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
SIGYSDKENITIMYLNQGCHLIGEEVFAGRRLSIQGK
HCCCCCCCCEEEEEECCCCHHHHHHHHCCCCEEECCC
>Mature Secondary Structure
MNNQNKSKEENKRKKEIEFRILASKGNALLDHEIIETFLSAVHDRAQARAIAKNLVTTCT
CCCCCCCHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIGRILGREIDELKSVEGVTDSTVSMIFCVKETLTRVFKEGLKKGPILDNLDKLIEYLRV
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
SIGYSDKENITIMYLNQGCHLIGEEVFAGRRLSIQGK
HCCCCCCCCEEEEEECCCCHHHHHHHHCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA