| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630172
Identifier: 225630172
GI number: 225630172
Start: 396577
End: 397122
Strand: Reverse
Name: 225630172
Synonym: WRi_003680
Alternate gene names: NA
Gene position: 397122-396577 (Counterclockwise)
Preceding gene: 225630173
Following gene: 225630171
Centisome position: 27.47
GC content: 35.71
Gene sequence:
>546_bases ATGAACATCTTTGTACTAGATGAAAACCCAGTAATTGCAGCACAAATGTTGTGTGATAAGCATATAGTAAAAATGCCATT AGAAACTGCTCAGTTATTAAGTAATGTTTTTTCAATAGCATTAAAAGCGCCAAATCCTTTTGTCAGTACCACAGATCAGA ATATAGCAGTTCCATATAAACTCACTCACAGCAATCATCCTTGTTCTTTGTGGGCTAGGCAATCGAAAGGGAACTTTTGT TGGTTGATAGAGTACGGAAAAGAATTATGTAAAGAGTACACTTGGCGATACAAAAGAAAGCATAAATCAGAAGAAGTAAT AGATTGGTGTGATAGTAATAAGGATTTACTCATTTTTCGATCAACTGATATGCAAGCTTTTATACAAGCACTGCCCGATC GGTATAAATGTACTAATCCTGTAAAAGCTTATAGGGAGTATTACCTACAGGAAAAGATGAGATTCGCTAAGTGGGAAAAT GGAAGAGAAGCACCAGGTTGGATAGTAGGAAATCCTGCTACACATTTTTTCCACATCTTTTCTTGA
Upstream 100 bases:
>100_bases TACTAAAAGCAGGTGTTTCTATTGATATTATAGCTCAAACTACTGGTCTTACAGTTGATGAAGTTAAAGACTTAAGCTGA TTCTATCTTTTGACACCTAG
Downstream 100 bases:
>100_bases TAAGGACACAAGGTTTACGATATCCAAGGGCTAGCAGCAGTAATACGCACACGTGCAAGATTATTGGGTATATAATGATA GGGAATAATTTGTATTAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MNIFVLDENPVIAAQMLCDKHIVKMPLETAQLLSNVFSIALKAPNPFVSTTDQNIAVPYKLTHSNHPCSLWARQSKGNFC WLIEYGKELCKEYTWRYKRKHKSEEVIDWCDSNKDLLIFRSTDMQAFIQALPDRYKCTNPVKAYREYYLQEKMRFAKWEN GREAPGWIVGNPATHFFHIFS
Sequences:
>Translated_181_residues MNIFVLDENPVIAAQMLCDKHIVKMPLETAQLLSNVFSIALKAPNPFVSTTDQNIAVPYKLTHSNHPCSLWARQSKGNFC WLIEYGKELCKEYTWRYKRKHKSEEVIDWCDSNKDLLIFRSTDMQAFIQALPDRYKCTNPVKAYREYYLQEKMRFAKWEN GREAPGWIVGNPATHFFHIFS >Mature_181_residues MNIFVLDENPVIAAQMLCDKHIVKMPLETAQLLSNVFSIALKAPNPFVSTTDQNIAVPYKLTHSNHPCSLWARQSKGNFC WLIEYGKELCKEYTWRYKRKHKSEEVIDWCDSNKDLLIFRSTDMQAFIQALPDRYKCTNPVKAYREYYLQEKMRFAKWEN GREAPGWIVGNPATHFFHIFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21257; Mature: 21257
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIFVLDENPVIAAQMLCDKHIVKMPLETAQLLSNVFSIALKAPNPFVSTTDQNIAVPYK CEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHEEECCCCCCEECCCCCEEEEEE LTHSNHPCSLWARQSKGNFCWLIEYGKELCKEYTWRYKRKHKSEEVIDWCDSNKDLLIFR ECCCCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEE STDMQAFIQALPDRYKCTNPVKAYREYYLQEKMRFAKWENGREAPGWIVGNPATHFFHIF CCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEEC S C >Mature Secondary Structure MNIFVLDENPVIAAQMLCDKHIVKMPLETAQLLSNVFSIALKAPNPFVSTTDQNIAVPYK CEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHEEECCCCCCEECCCCCEEEEEE LTHSNHPCSLWARQSKGNFCWLIEYGKELCKEYTWRYKRKHKSEEVIDWCDSNKDLLIFR ECCCCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEE STDMQAFIQALPDRYKCTNPVKAYREYYLQEKMRFAKWENGREAPGWIVGNPATHFFHIF CCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEEC S C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA