| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is secA [H]
Identifier: 225630168
GI number: 225630168
Start: 388959
End: 391619
Strand: Direct
Name: secA [H]
Synonym: WRi_003630
Alternate gene names: 225630168
Gene position: 388959-391619 (Clockwise)
Preceding gene: 225630167
Following gene: 225630175
Centisome position: 26.9
GC content: 37.28
Gene sequence:
>2661_bases ATGCTAGATTCTCCGCTAATTTTGACAGCCATTCTTATATTTTTCATTTTTACGTTGTCATTCTTTTTTATAAGAAAGAT ATTTGGGTCAACAAATAAGAAGATAATAAAATCCTTTAGGAAAATTGTTCAGCAAATAAATGCATTAGAAACAGAAATGC AGAGCTTATCTGATGAGGAGCTTGCTGGTAAAACTGAAGAATTCAAACGAGAATTGAAAAATGGGAAAACGTTAAATGAT CTTCTCGTACCTGCATTTGCGGTTGTGCGCGAAGCCTCCCGAAGGTTTCTTAACATGAGGCATTTTGATGTTCAGCTAAT TGGTGGAATGGTGCTTCATAATGGCATGATATCAGAAATGAAAACAGGAGAAGGAAAGACACTCGTTGCAACTTTAGCAG CATATCTAAATTCCTTAGAAGGGAAAGGCGTGCACGTCGTAACTGTTAACGATTATCTTGCAAAACGAGACACAGAGTGG ATGAGCAAATTATATAATTCTCTTGGGGTTTCTGTTGCGTTTATCACGAATAACTTGACAGACGAAGAGAGAAAAGAGGC TTACAGTGCAGATATCGTGTATTCCACAAATAACGAACTTGCCTTTGACTACCTGCGAGACAATATGAAATTTTCTCAAG AAGACATGGTTCAGAGAGGCTTTCACTACGGAATAGTTGATGAAGTGGACTCAATACTCATTGATGAAGCTCGCACTCCG CTTATTATTTCTGGCCAGATTGAGGAAAACAATCAGATATATAAGCATATCAATAAAATAGTAACCAAATTAGTTGACTA TGATTATGAAGTAGATGAAAAAGGTAGAACGGTATTCTTGACTGAAGATGGTATTTCACGAGTGGAGGAACTACTAAGGT CATACAATCTCATTCCTGAAAATTCCTCGCTCTATGATACTGACAGCATGATAATGACTCATTATATAGACCAAGCATTA CGTGCACATAAGCTGTTTACTGCTGATAAAGATTATATAGTAAAGGATGGCAAGGTAGTGATTATTGATGAATTTACTGG GCGTATGATGGAGGGCAGGAGATATTCCGATGGTCTTCATCAGGCACTTGAAGCGAAGGAGAATCTTGAAATTCAGCATG AAAACCAAACTTTAGCATCGGTCACATTTCAGAATTACTTTCGTATGTACAATAAACTTTCCGGAATGACTGGAACAGCA GCAACAGAGGCAGAAGAGTTTAGTGATATATACAGATTAAATGTAGTAAAAATTCCAACCAATGTATCTGTAAAAAGAGT TGATATTGATGATGAAATTTATGGCACAGGAAAAGAAAAATTTAATGCTGTGTTAAAGTTCATAGAAGAATGCCATAAAC GCCTTCAACCGGTCCTTGTCGGCACGGTAAGCATCGAAAACTCTGAGAAGCTTTCTGCGCTTTTGCAAAGCCATTCTCTT AAGCATTCCGTATTAAACGCTCGTTATCATGAACAAGAGGCGTACATAATAGCACAAGCTGGAGTGCCAGGCAGTGTCAC CATAGCAACTAACATGGCAGGACGTGGAACTGATATTCAGCTTGGTGGAAATGCTGAAATGATTGCAAAGGTGGAGCTAA AGAAGATAAAAAATGCTGATGAAAGAGAAAAAAAATACCAAGAAATAGTTGAAAGAGTAAAAAAAGATAAGGAAATTGCT ATAAAAGCTGGTGGTTTATGTGTGGTTGGAACCGAAAGACATGAAAGCAGGAGAATAGATGATCAATTACGCGGCCGTTC TGGTCGTCAGGGGGATCCTGGACTTTCTAAGTTCTTTTTATCGCTCGAAGATGACCTAATGAGAATATTTGGCTCTGATA GAATGAGAAGCTTTTTACAAAAAGTAGGGTTAAAGAATAACGAAGCTATTCATCATCCATGGATCAATAAGGCACTCGAG AAAGCGCAAAAGAAAGTTGAAGCTAGAAACTATGACGTGCGGAAATCTCTACTTAAGTTTGATGACGTAATCAATAACCA ACGTAAAGTTATTTTTAAGCAGAGAAACAATATCTTAGGCAACGAAATTAATGATATATTTGAAGTGTATAGCGAAGTAA ATGAGAGCGTAGTAGAAGGTATAATCCAAAGTGGCTATTATGAGGATTATATTGAAAATATAGTCAAAGAATTCCATACA AGGTATGGAATAACGCTTGATAAAGAAGACTTGGCAAAGTTTTTGAATAAACAAGAAGCTTTGAATTATATAAATGATAA GATACAAGAATTTTTTACTGAGAAAGAAAAATATTTCAACAGTCAGCACACTACAGATTTGTGGAATACGATCGTGAAGC AAATGATGATAATGACACTTGATCATTTATGGAGGGAACACCTTTCAGTTCTAGAGAGCCTAAGACAAAGCATAAGCTTA CGTGCTATGGGGCAGAAAGATCCACTGAATGAATTTAAACGCGAAGCTTTCTTGATGTTTGAGTCAATGCTTGAAAAATG GAAGGAACTCACCATTCACCGCTTAGCACACTTTAAGTTGGCAGACAACCAAGAGATAGGCAATAGGTTACATTCTGCTA GAAATAGCAGACTTCCCAAAGTCTCAAGAAACGACAAATGTCCTTGCAACTCCGGAAAGAAATACAAACACTGCCATGGT GCGGTTACTGTGGTGAGCTAA
Upstream 100 bases:
>100_bases TAAAAAAGACTTTCCAAAGACTCCCCAAATCTAATATGTCATTGCTGTAGGCTGCATTTAGTAATATAATCTCATATTAA ATAAGACTTTACTTAAGTTT
Downstream 100 bases:
>100_bases TAATTATGGTTATACAGTTTGTTTATTTCCATCAACATTACTGCATCGTATCCGTTCAGGAGAGTGGTTTAAGAAACAAT AGATAGGAGATTTTGGAAAG
Product: preprotein translocase subunit SecA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 886; Mature: 886
Protein sequence:
>886_residues MLDSPLILTAILIFFIFTLSFFFIRKIFGSTNKKIIKSFRKIVQQINALETEMQSLSDEELAGKTEEFKRELKNGKTLND LLVPAFAVVREASRRFLNMRHFDVQLIGGMVLHNGMISEMKTGEGKTLVATLAAYLNSLEGKGVHVVTVNDYLAKRDTEW MSKLYNSLGVSVAFITNNLTDEERKEAYSADIVYSTNNELAFDYLRDNMKFSQEDMVQRGFHYGIVDEVDSILIDEARTP LIISGQIEENNQIYKHINKIVTKLVDYDYEVDEKGRTVFLTEDGISRVEELLRSYNLIPENSSLYDTDSMIMTHYIDQAL RAHKLFTADKDYIVKDGKVVIIDEFTGRMMEGRRYSDGLHQALEAKENLEIQHENQTLASVTFQNYFRMYNKLSGMTGTA ATEAEEFSDIYRLNVVKIPTNVSVKRVDIDDEIYGTGKEKFNAVLKFIEECHKRLQPVLVGTVSIENSEKLSALLQSHSL KHSVLNARYHEQEAYIIAQAGVPGSVTIATNMAGRGTDIQLGGNAEMIAKVELKKIKNADEREKKYQEIVERVKKDKEIA IKAGGLCVVGTERHESRRIDDQLRGRSGRQGDPGLSKFFLSLEDDLMRIFGSDRMRSFLQKVGLKNNEAIHHPWINKALE KAQKKVEARNYDVRKSLLKFDDVINNQRKVIFKQRNNILGNEINDIFEVYSEVNESVVEGIIQSGYYEDYIENIVKEFHT RYGITLDKEDLAKFLNKQEALNYINDKIQEFFTEKEKYFNSQHTTDLWNTIVKQMMIMTLDHLWREHLSVLESLRQSISL RAMGQKDPLNEFKREAFLMFESMLEKWKELTIHRLAHFKLADNQEIGNRLHSARNSRLPKVSRNDKCPCNSGKKYKHCHG AVTVVS
Sequences:
>Translated_886_residues MLDSPLILTAILIFFIFTLSFFFIRKIFGSTNKKIIKSFRKIVQQINALETEMQSLSDEELAGKTEEFKRELKNGKTLND LLVPAFAVVREASRRFLNMRHFDVQLIGGMVLHNGMISEMKTGEGKTLVATLAAYLNSLEGKGVHVVTVNDYLAKRDTEW MSKLYNSLGVSVAFITNNLTDEERKEAYSADIVYSTNNELAFDYLRDNMKFSQEDMVQRGFHYGIVDEVDSILIDEARTP LIISGQIEENNQIYKHINKIVTKLVDYDYEVDEKGRTVFLTEDGISRVEELLRSYNLIPENSSLYDTDSMIMTHYIDQAL RAHKLFTADKDYIVKDGKVVIIDEFTGRMMEGRRYSDGLHQALEAKENLEIQHENQTLASVTFQNYFRMYNKLSGMTGTA ATEAEEFSDIYRLNVVKIPTNVSVKRVDIDDEIYGTGKEKFNAVLKFIEECHKRLQPVLVGTVSIENSEKLSALLQSHSL KHSVLNARYHEQEAYIIAQAGVPGSVTIATNMAGRGTDIQLGGNAEMIAKVELKKIKNADEREKKYQEIVERVKKDKEIA IKAGGLCVVGTERHESRRIDDQLRGRSGRQGDPGLSKFFLSLEDDLMRIFGSDRMRSFLQKVGLKNNEAIHHPWINKALE KAQKKVEARNYDVRKSLLKFDDVINNQRKVIFKQRNNILGNEINDIFEVYSEVNESVVEGIIQSGYYEDYIENIVKEFHT RYGITLDKEDLAKFLNKQEALNYINDKIQEFFTEKEKYFNSQHTTDLWNTIVKQMMIMTLDHLWREHLSVLESLRQSISL RAMGQKDPLNEFKREAFLMFESMLEKWKELTIHRLAHFKLADNQEIGNRLHSARNSRLPKVSRNDKCPCNSGKKYKHCHG AVTVVS >Mature_886_residues MLDSPLILTAILIFFIFTLSFFFIRKIFGSTNKKIIKSFRKIVQQINALETEMQSLSDEELAGKTEEFKRELKNGKTLND LLVPAFAVVREASRRFLNMRHFDVQLIGGMVLHNGMISEMKTGEGKTLVATLAAYLNSLEGKGVHVVTVNDYLAKRDTEW MSKLYNSLGVSVAFITNNLTDEERKEAYSADIVYSTNNELAFDYLRDNMKFSQEDMVQRGFHYGIVDEVDSILIDEARTP LIISGQIEENNQIYKHINKIVTKLVDYDYEVDEKGRTVFLTEDGISRVEELLRSYNLIPENSSLYDTDSMIMTHYIDQAL RAHKLFTADKDYIVKDGKVVIIDEFTGRMMEGRRYSDGLHQALEAKENLEIQHENQTLASVTFQNYFRMYNKLSGMTGTA ATEAEEFSDIYRLNVVKIPTNVSVKRVDIDDEIYGTGKEKFNAVLKFIEECHKRLQPVLVGTVSIENSEKLSALLQSHSL KHSVLNARYHEQEAYIIAQAGVPGSVTIATNMAGRGTDIQLGGNAEMIAKVELKKIKNADEREKKYQEIVERVKKDKEIA IKAGGLCVVGTERHESRRIDDQLRGRSGRQGDPGLSKFFLSLEDDLMRIFGSDRMRSFLQKVGLKNNEAIHHPWINKALE KAQKKVEARNYDVRKSLLKFDDVINNQRKVIFKQRNNILGNEINDIFEVYSEVNESVVEGIIQSGYYEDYIENIVKEFHT RYGITLDKEDLAKFLNKQEALNYINDKIQEFFTEKEKYFNSQHTTDLWNTIVKQMMIMTLDHLWREHLSVLESLRQSISL RAMGQKDPLNEFKREAFLMFESMLEKWKELTIHRLAHFKLADNQEIGNRLHSARNSRLPKVSRNDKCPCNSGKKYKHCHG AVTVVS
Specific function: Part of the Sec protein translocase complex. Interacts with the secYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the pr
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm (By similarity). Note=Distribution is 50-50 (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secA family [H]
Homologues:
Organism=Escherichia coli, GI1786287, Length=910, Percent_Identity=49.1208791208791, Blast_Score=859, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004027 - InterPro: IPR000185 - InterPro: IPR020937 - InterPro: IPR011115 - InterPro: IPR014018 - InterPro: IPR011130 - InterPro: IPR011116 [H]
Pfam domain/function: PF02810 SEC-C; PF07517 SecA_DEAD; PF01043 SecA_PP_bind; PF07516 SecA_SW [H]
EC number: NA
Molecular weight: Translated: 101965; Mature: 101965
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: PS01312 SECA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDSPLILTAILIFFIFTLSFFFIRKIFGSTNKKIIKSFRKIVQQINALETEMQSLSDEE CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH LAGKTEEFKRELKNGKTLNDLLVPAFAVVREASRRFLNMRHFDVQLIGGMVLHNGMISEM HCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH KTGEGKTLVATLAAYLNSLEGKGVHVVTVNDYLAKRDTEWMSKLYNSLGVSVAFITNNLT CCCCCHHHHHHHHHHHHCCCCCCEEEEEECHHHHHCCHHHHHHHHHHHCCEEEEEECCCC DEERKEAYSADIVYSTNNELAFDYLRDNMKFSQEDMVQRGFHYGIVDEVDSILIDEARTP CHHHHHHHCCCEEEECCCCEEHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCC LIISGQIEENNQIYKHINKIVTKLVDYDYEVDEKGRTVFLTEDGISRVEELLRSYNLIPE EEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCC NSSLYDTDSMIMTHYIDQALRAHKLFTADKDYIVKDGKVVIIDEFTGRMMEGRRYSDGLH CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEECCCCHHHCCCCHHHHHH QALEAKENLEIQHENQTLASVTFQNYFRMYNKLSGMTGTAATEAEEFSDIYRLNVVKIPT HHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHEEEEEECC NVSVKRVDIDDEIYGTGKEKFNAVLKFIEECHKRLQPVLVGTVSIENSEKLSALLQSHSL CCEEEEECCCCHHCCCCHHHHHHHHHHHHHHHHHCCHHEEEEEECCCHHHHHHHHHHHHH KHSVLNARYHEQEAYIIAQAGVPGSVTIATNMAGRGTDIQLGGNAEMIAKVELKKIKNAD HHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCCCCEEEECCCCCCHHHHHHHHHCCCH EREKKYQEIVERVKKDKEIAIKAGGLCVVGTERHESRRIDDQLRGRSGRQGDPGLSKFFL HHHHHHHHHHHHHHCCCCEEEEECCEEEEECCCHHHHCCHHHHCCCCCCCCCCCHHHHHH SLEDDLMRIFGSDRMRSFLQKVGLKNNEAIHHPWINKALEKAQKKVEARNYDVRKSLLKF HHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH DDVINNQRKVIFKQRNNILGNEINDIFEVYSEVNESVVEGIIQSGYYEDYIENIVKEFHT HHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RYGITLDKEDLAKFLNKQEALNYINDKIQEFFTEKEKYFNSQHTTDLWNTIVKQMMIMTL HCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH DHLWREHLSVLESLRQSISLRAMGQKDPLNEFKREAFLMFESMLEKWKELTIHRLAHFKL HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ADNQEIGNRLHSARNSRLPKVSRNDKCPCNSGKKYKHCHGAVTVVS CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCEEEEEC >Mature Secondary Structure MLDSPLILTAILIFFIFTLSFFFIRKIFGSTNKKIIKSFRKIVQQINALETEMQSLSDEE CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH LAGKTEEFKRELKNGKTLNDLLVPAFAVVREASRRFLNMRHFDVQLIGGMVLHNGMISEM HCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH KTGEGKTLVATLAAYLNSLEGKGVHVVTVNDYLAKRDTEWMSKLYNSLGVSVAFITNNLT CCCCCHHHHHHHHHHHHCCCCCCEEEEEECHHHHHCCHHHHHHHHHHHCCEEEEEECCCC DEERKEAYSADIVYSTNNELAFDYLRDNMKFSQEDMVQRGFHYGIVDEVDSILIDEARTP CHHHHHHHCCCEEEECCCCEEHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCC LIISGQIEENNQIYKHINKIVTKLVDYDYEVDEKGRTVFLTEDGISRVEELLRSYNLIPE EEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCC NSSLYDTDSMIMTHYIDQALRAHKLFTADKDYIVKDGKVVIIDEFTGRMMEGRRYSDGLH CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEECCCCHHHCCCCHHHHHH QALEAKENLEIQHENQTLASVTFQNYFRMYNKLSGMTGTAATEAEEFSDIYRLNVVKIPT HHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHEEEEEECC NVSVKRVDIDDEIYGTGKEKFNAVLKFIEECHKRLQPVLVGTVSIENSEKLSALLQSHSL CCEEEEECCCCHHCCCCHHHHHHHHHHHHHHHHHCCHHEEEEEECCCHHHHHHHHHHHHH KHSVLNARYHEQEAYIIAQAGVPGSVTIATNMAGRGTDIQLGGNAEMIAKVELKKIKNAD HHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCCCCEEEECCCCCCHHHHHHHHHCCCH EREKKYQEIVERVKKDKEIAIKAGGLCVVGTERHESRRIDDQLRGRSGRQGDPGLSKFFL HHHHHHHHHHHHHHCCCCEEEEECCEEEEECCCHHHHCCHHHHCCCCCCCCCCCHHHHHH SLEDDLMRIFGSDRMRSFLQKVGLKNNEAIHHPWINKALEKAQKKVEARNYDVRKSLLKF HHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH DDVINNQRKVIFKQRNNILGNEINDIFEVYSEVNESVVEGIIQSGYYEDYIENIVKEFHT HHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RYGITLDKEDLAKFLNKQEALNYINDKIQEFFTEKEKYFNSQHTTDLWNTIVKQMMIMTL HCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH DHLWREHLSVLESLRQSISLRAMGQKDPLNEFKREAFLMFESMLEKWKELTIHRLAHFKL HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ADNQEIGNRLHSARNSRLPKVSRNDKCPCNSGKKYKHCHGAVTVVS CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA