| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
Click here to switch to the map view.
The map label for this gene is 225630118
Identifier: 225630118
GI number: 225630118
Start: 315398
End: 315931
Strand: Direct
Name: 225630118
Synonym: WRi_002980
Alternate gene names: NA
Gene position: 315398-315931 (Clockwise)
Preceding gene: 225630117
Following gene: 225630121
Centisome position: 21.81
GC content: 35.21
Gene sequence:
>534_bases ATGAATAAGAAATTTCTCTATTCACCATTGTCAATAAAAAGTATAGGAGAAAACGGTGTATTTTCTGGTTATGCGAGCGT TTTTAACATAGTTGATAAACAAAATGATCTGATATTGCCCGGAGCATTTAAGGAAAATTTAAACAGAAATAAAATAAAAC TCCTTTGGCAGCATAATCCTGACGAACCTATAGGTAGCATCATAGATATTTATGAAAATGATGTTGGCCTGTATATAACC GCACATTTACTTTTGGGTATTCAGAAAGCAGAAGAAGTGTATTTGATGCTCAAAACTGGGGCAATTAACGGACTTTCCAT CGGCTATATACCTATAGAGTATGATGTTGATCATAAAAGCGGAGCTAGAGTGTTAAAACAAGTGGAATTATGGGAAGTCA GTTTGGTCACTTTTCCTGCAAACTTAGCTGCTCAGGTAATCAATGTGAAAAATCAGAACAATGAACAGGAAGTGTTAGCA AGAGCGATAGAAAAAGCAAATGCTGTACTTGCAGACATGTACATTTCTGCTTAA
Upstream 100 bases:
>100_bases AAAAATACTTTCCCTTTTTAGAGAACTGCATAAAATAGATTTGACATTGCAGTGCGTTGTGCAAACAGAATTCCCAATAC TATAACCTACAGGAGGCCTT
Downstream 100 bases:
>100_bases AGTGTATTAGGCGGGCAAAGACTTTACCATAATTTGACACCTGCGTTAGTATTTGTTTAACATTTATACTAATATATATA ACTCTATTACTATTAAAATT
Product: phage prohead protease
Products: NA
Alternate protein names: HK97 Family Phage Prohead Protease; Peptidase; Prohead Peptidase; Caudovirus Prohead Protease; HK97 Family Phage Capsid Protein; Head Maturation Protease; Phage Prohead Protease And Phage Capsid Protein; Phage Head Protein/Prohead Proteinase; Phage-Related Protein; Phage Protein; HK97 Family Phage Prohead Protease/Phage Capsid Protein; Phage Protease; Prohead Protease; Phage Pro-Head Protease
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MNKKFLYSPLSIKSIGENGVFSGYASVFNIVDKQNDLILPGAFKENLNRNKIKLLWQHNPDEPIGSIIDIYENDVGLYIT AHLLLGIQKAEEVYLMLKTGAINGLSIGYIPIEYDVDHKSGARVLKQVELWEVSLVTFPANLAAQVINVKNQNNEQEVLA RAIEKANAVLADMYISA
Sequences:
>Translated_177_residues MNKKFLYSPLSIKSIGENGVFSGYASVFNIVDKQNDLILPGAFKENLNRNKIKLLWQHNPDEPIGSIIDIYENDVGLYIT AHLLLGIQKAEEVYLMLKTGAINGLSIGYIPIEYDVDHKSGARVLKQVELWEVSLVTFPANLAAQVINVKNQNNEQEVLA RAIEKANAVLADMYISA >Mature_177_residues MNKKFLYSPLSIKSIGENGVFSGYASVFNIVDKQNDLILPGAFKENLNRNKIKLLWQHNPDEPIGSIIDIYENDVGLYIT AHLLLGIQKAEEVYLMLKTGAINGLSIGYIPIEYDVDHKSGARVLKQVELWEVSLVTFPANLAAQVINVKNQNNEQEVLA RAIEKANAVLADMYISA
Specific function: Unknown
COG id: COG3740
COG function: function code R; Phage head maturation protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19703; Mature: 19703
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKFLYSPLSIKSIGENGVFSGYASVFNIVDKQNDLILPGAFKENLNRNKIKLLWQHNP CCCCEEECCCCEEECCCCCCCHHHHHHHHHHCCCCCEEECCHHHHCCCCCEEEEEEECCC DEPIGSIIDIYENDVGLYITAHLLLGIQKAEEVYLMLKTGAINGLSIGYIPIEYDVDHKS CCHHHHHHHHHCCCCCCEEEEHHHHHHHCCCEEEEEEECCCCCCEEEEEEEEEEECCCCH GARVLKQVELWEVSLVTFPANLAAQVINVKNQNNEQEVLARAIEKANAVLADMYISA HHHHHHHHHHEEEEEEEECHHHHHHEEECCCCCCHHHHHHHHHHHHHHHEEHEEECC >Mature Secondary Structure MNKKFLYSPLSIKSIGENGVFSGYASVFNIVDKQNDLILPGAFKENLNRNKIKLLWQHNP CCCCEEECCCCEEECCCCCCCHHHHHHHHHHCCCCCEEECCHHHHCCCCCEEEEEEECCC DEPIGSIIDIYENDVGLYITAHLLLGIQKAEEVYLMLKTGAINGLSIGYIPIEYDVDHKS CCHHHHHHHHHCCCCCCEEEEHHHHHHHCCCEEEEEEECCCCCCEEEEEEEEEEECCCCH GARVLKQVELWEVSLVTFPANLAAQVINVKNQNNEQEVLARAIEKANAVLADMYISA HHHHHHHHHHEEEEEEEECHHHHHHEEECCCCCCHHHHHHHHHHHHHHHEEHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA