| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630107
Identifier: 225630107
GI number: 225630107
Start: 300164
End: 301423
Strand: Reverse
Name: 225630107
Synonym: WRi_002870
Alternate gene names: NA
Gene position: 301423-300164 (Counterclockwise)
Preceding gene: 225630108
Following gene: 225630103
Centisome position: 20.85
GC content: 35.08
Gene sequence:
>1260_bases ATGTTTTCGCTTGGTATGGGAGCTGCAGCCACGTTTACTCTAATTAAAATGTCTCCGCTAGTGTTAGTAATAGTAGCTGT GACCTTCTTTTTGACTGCAATAGCATCTATGTCTCTGTTTGTATTATATAAAAAAGTAAAAGGGGAACGCAAACACGAGG TAATTGTTAATAATGCTGTATTTAACATAAGTCTAGAAGAAGCAGCTAATGATTTGTTTAGCGGGTTATCAACTATAGCA GAAAGAGGAGCAGAAGCAGGTGCACTATACCTGGAAGTAAAGGAAAAGACTGAAAGTGTAGCTAAAAAAATGACATCCAA AAAGGAATTAATTGAAGCAAGATTTCAAAATATACAAGAAAATTTCATTAATAAGTTAAGTAATTTTGAAGAACTTCAAG GTGCCAGAGATTCTAGTACTTTAAAGAAATTCTATGCTGCTGTTAAAGATGTTCTAAAGATACGCTCCAGCATCCCTATT TCCAATTTACATCTATTATCGCTTGTTTACCATTTATCATTGGAAGTATCATATGCTATTTTTCAGGCAATAACTGATCC AATTCTTGGAAGTACAATTTTAACTGCCATAAGTGAAAGAAAATTGCCTGAAGATAAGCAGTGGGCTAAGGTATTAAAAA ATACAGTACCAAACTTAATAAGAAATCAAGAAGTTGTGCGGAATGTTATAGTACCAACTCTTACTGATATTTTAAAGAGC CTATCAGAATCAAGAGAAGAAAGAAAATTTATAATCTATACTCTGGTCTGCCTGAAAGAAGTGATTGATGAAGTTTATAC GACATCGGTACAAGAGTCATTGTATAGGATATTAGGAGTAGAACTTGCAAATAGTCTAAATGGTATGGTACAGGCAATAA GTAACCTATTAGGCTGCTATGGACACAAAGAAGTAGAACGTGCAAGAACCGCAAATGAGTTAGATTACAGAGTAGGTAAA CTTACACCTGAAGAAACGCAGCAATTCGTTATAAACTTAGGAGAGAGAGTAGGATCTCTCAGGGAGTTTGAGGGTCGAGT TACAAATAAACAGTCAATTAGTAAATTGATAGATTATTGTTTGGACCCAAAACTGAATGATAGGGAAGCAGCCGCAACAC TATTAAATTATATACTCACATGTACTGAAGATGGTCGTTATTTGGCCGCTGAAGCTGGTACTAATAATAATTTATCTAGC AACTCTAATGTTGTACTTATTACGCACGTGGCAGCAAATCGATCTGCACAGTTAGACTAG
Upstream 100 bases:
>100_bases TTCTTTACGAAACAGAGCAGACATTCCAAATAACGCAAACATTTCAAATAATAAGAAAAACTGTAAGTTGTATTTCCAAG TAGCGGTTGGATGTGTAGCG
Downstream 100 bases:
>100_bases AGGCGGCTATATGGAAAAAAGTGAAGATAGTTTCAGAGATAAGCAAGCAAATGACAATTGATAGACTTAAACTATGTTCT CAATTTCTCAAAAAAATCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MFSLGMGAAATFTLIKMSPLVLVIVAVTFFLTAIASMSLFVLYKKVKGERKHEVIVNNAVFNISLEEAANDLFSGLSTIA ERGAEAGALYLEVKEKTESVAKKMTSKKELIEARFQNIQENFINKLSNFEELQGARDSSTLKKFYAAVKDVLKIRSSIPI SNLHLLSLVYHLSLEVSYAIFQAITDPILGSTILTAISERKLPEDKQWAKVLKNTVPNLIRNQEVVRNVIVPTLTDILKS LSESREERKFIIYTLVCLKEVIDEVYTTSVQESLYRILGVELANSLNGMVQAISNLLGCYGHKEVERARTANELDYRVGK LTPEETQQFVINLGERVGSLREFEGRVTNKQSISKLIDYCLDPKLNDREAAATLLNYILTCTEDGRYLAAEAGTNNNLSS NSNVVLITHVAANRSAQLD
Sequences:
>Translated_419_residues MFSLGMGAAATFTLIKMSPLVLVIVAVTFFLTAIASMSLFVLYKKVKGERKHEVIVNNAVFNISLEEAANDLFSGLSTIA ERGAEAGALYLEVKEKTESVAKKMTSKKELIEARFQNIQENFINKLSNFEELQGARDSSTLKKFYAAVKDVLKIRSSIPI SNLHLLSLVYHLSLEVSYAIFQAITDPILGSTILTAISERKLPEDKQWAKVLKNTVPNLIRNQEVVRNVIVPTLTDILKS LSESREERKFIIYTLVCLKEVIDEVYTTSVQESLYRILGVELANSLNGMVQAISNLLGCYGHKEVERARTANELDYRVGK LTPEETQQFVINLGERVGSLREFEGRVTNKQSISKLIDYCLDPKLNDREAAATLLNYILTCTEDGRYLAAEAGTNNNLSS NSNVVLITHVAANRSAQLD >Mature_419_residues MFSLGMGAAATFTLIKMSPLVLVIVAVTFFLTAIASMSLFVLYKKVKGERKHEVIVNNAVFNISLEEAANDLFSGLSTIA ERGAEAGALYLEVKEKTESVAKKMTSKKELIEARFQNIQENFINKLSNFEELQGARDSSTLKKFYAAVKDVLKIRSSIPI SNLHLLSLVYHLSLEVSYAIFQAITDPILGSTILTAISERKLPEDKQWAKVLKNTVPNLIRNQEVVRNVIVPTLTDILKS LSESREERKFIIYTLVCLKEVIDEVYTTSVQESLYRILGVELANSLNGMVQAISNLLGCYGHKEVERARTANELDYRVGK LTPEETQQFVINLGERVGSLREFEGRVTNKQSISKLIDYCLDPKLNDREAAATLLNYILTCTEDGRYLAAEAGTNNNLSS NSNVVLITHVAANRSAQLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46637; Mature: 46637
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSLGMGAAATFTLIKMSPLVLVIVAVTFFLTAIASMSLFVLYKKVKGERKHEVIVNNAV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCE FNISLEEAANDLFSGLSTIAERGAEAGALYLEVKEKTESVAKKMTSKKELIEARFQNIQE EEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH NFINKLSNFEELQGARDSSTLKKFYAAVKDVLKIRSSIPISNLHLLSLVYHLSLEVSYAI HHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH FQAITDPILGSTILTAISERKLPEDKQWAKVLKNTVPNLIRNQEVVRNVIVPTLTDILKS HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSESREERKFIIYTLVCLKEVIDEVYTTSVQESLYRILGVELANSLNGMVQAISNLLGCY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GHKEVERARTANELDYRVGKLTPEETQQFVINLGERVGSLREFEGRVTNKQSISKLIDYC CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LDPKLNDREAAATLLNYILTCTEDGRYLAAEAGTNNNLSSNSNVVLITHVAANRSAQLD CCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCC >Mature Secondary Structure MFSLGMGAAATFTLIKMSPLVLVIVAVTFFLTAIASMSLFVLYKKVKGERKHEVIVNNAV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCE FNISLEEAANDLFSGLSTIAERGAEAGALYLEVKEKTESVAKKMTSKKELIEARFQNIQE EEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH NFINKLSNFEELQGARDSSTLKKFYAAVKDVLKIRSSIPISNLHLLSLVYHLSLEVSYAI HHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH FQAITDPILGSTILTAISERKLPEDKQWAKVLKNTVPNLIRNQEVVRNVIVPTLTDILKS HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSESREERKFIIYTLVCLKEVIDEVYTTSVQESLYRILGVELANSLNGMVQAISNLLGCY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GHKEVERARTANELDYRVGKLTPEETQQFVINLGERVGSLREFEGRVTNKQSISKLIDYC CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LDPKLNDREAAATLLNYILTCTEDGRYLAAEAGTNNNLSSNSNVVLITHVAANRSAQLD CCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA