| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630100
Identifier: 225630100
GI number: 225630100
Start: 290203
End: 291330
Strand: Reverse
Name: 225630100
Synonym: WRi_002790
Alternate gene names: NA
Gene position: 291330-290203 (Counterclockwise)
Preceding gene: 225630101
Following gene: 225630099
Centisome position: 20.15
GC content: 33.16
Gene sequence:
>1128_bases ATGAGCAATTTGCTTAGTGAGGCTAATGCATTTTATTTTGTAGCTAGTTCCTTAGCTACTCTTACGTTACTTACATCTTT AGCGCTTATTGTAACTTCTAATGTGCCTCTTCCTCTAATTCTTGCTTTAGCTACATTATCTGTTTTGGTGCTTGCACTTT CGTATAAAATAATTAGTAATAATGTAGAATTGGAAGCAAAAGTAAAAGGTCAGTTAGAACATAAGGAGGAGATGCTTTCT CTTGAACACCAAGAGTTACGTGATGAAAATACAAGATTGAATGAAAGAGTAGATTCTTTAATGGAGGAATTGTGTCAATG CAAATTAGAAAGTGAAAAGAATAAGTTATGTTTAAAGTCAGAATATGAAGATGAGTTACGCTTAAGATTGGAATATGAAG ATGAATTAAACTTGGAATTAGAACATAAAAGTAGAGAAGCTTCTTCTCTGCGTACTCAATTAACTATGTTAAGAAAAAAA GTAGAAGTAGAAGAAGTAAAACAATTAAAAACTTTAGAATCGGAAGAACAACATGAGAGCTCAGAAAGCGACATAGAAGA ATTAGAGAAGAAGTTATGCCAGTCGGAAAAGGAAAAGAAAGAATTAGAAGGTAAAGTTAGTGATGAACGTCAAAAGCGCA CTGATCTTGAAAGTAAAGTTGATAAATTGTGTACAAAGGAGAAAGAGTACTTATCTAAAATTAAGGAGCTGGAAAAGGAG TCATTATCTTTACAAAAAGAAGAGAAAGAATCTGATAACACATTAACAACAGTGAATGATGATCGCGATAATAAGGTGAA AGAATTAAACAGTTCACTTTTGAAGCAATCCTCTCAAATAGAACAACTTCAAAAAGCTTTATTGGAAAAGAAAAAAGAAG AAGTGCTTTTTTTGCAACGGATGATAGAATATGTAACAGATGAGGTAGAAAAATTAGTAAGGGAAAATGAAGTGATCAGA GATGATGATAAAAAAGTAATATTACAAGTGATTCAAGCAACAAAGTCTGTGTTAGTAGAAGAAGCTGCACAATATTTGCC AGGCGAAACGTCTGTTCCTTCATTTATGGAAGATCCTGGATATACCAGTGGATGTTCTACCCCGACCAACAGCTGCCACA CATTTTGA
Upstream 100 bases:
>100_bases GGGAAGTTTGTTGTAGGTGCAGCACTATAATTCCTCCACAGATAAGAGAATTTTAATAAATATATACAAGACTGCTGAAC GTGGGGGGAGGAGGGGAGTA
Downstream 100 bases:
>100_bases GTACAGTTGTACACTCGATACACAAGGTCTAAGTCATTTTTTAGCTAGCAGACTGAAGATGGGAAGTTTGTTGTAGGTGC AGCACTATAATTCCTCCACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MSNLLSEANAFYFVASSLATLTLLTSLALIVTSNVPLPLILALATLSVLVLALSYKIISNNVELEAKVKGQLEHKEEMLS LEHQELRDENTRLNERVDSLMEELCQCKLESEKNKLCLKSEYEDELRLRLEYEDELNLELEHKSREASSLRTQLTMLRKK VEVEEVKQLKTLESEEQHESSESDIEELEKKLCQSEKEKKELEGKVSDERQKRTDLESKVDKLCTKEKEYLSKIKELEKE SLSLQKEEKESDNTLTTVNDDRDNKVKELNSSLLKQSSQIEQLQKALLEKKKEEVLFLQRMIEYVTDEVEKLVRENEVIR DDDKKVILQVIQATKSVLVEEAAQYLPGETSVPSFMEDPGYTSGCSTPTNSCHTF
Sequences:
>Translated_375_residues MSNLLSEANAFYFVASSLATLTLLTSLALIVTSNVPLPLILALATLSVLVLALSYKIISNNVELEAKVKGQLEHKEEMLS LEHQELRDENTRLNERVDSLMEELCQCKLESEKNKLCLKSEYEDELRLRLEYEDELNLELEHKSREASSLRTQLTMLRKK VEVEEVKQLKTLESEEQHESSESDIEELEKKLCQSEKEKKELEGKVSDERQKRTDLESKVDKLCTKEKEYLSKIKELEKE SLSLQKEEKESDNTLTTVNDDRDNKVKELNSSLLKQSSQIEQLQKALLEKKKEEVLFLQRMIEYVTDEVEKLVRENEVIR DDDKKVILQVIQATKSVLVEEAAQYLPGETSVPSFMEDPGYTSGCSTPTNSCHTF >Mature_374_residues SNLLSEANAFYFVASSLATLTLLTSLALIVTSNVPLPLILALATLSVLVLALSYKIISNNVELEAKVKGQLEHKEEMLSL EHQELRDENTRLNERVDSLMEELCQCKLESEKNKLCLKSEYEDELRLRLEYEDELNLELEHKSREASSLRTQLTMLRKKV EVEEVKQLKTLESEEQHESSESDIEELEKKLCQSEKEKKELEGKVSDERQKRTDLESKVDKLCTKEKEYLSKIKELEKES LSLQKEEKESDNTLTTVNDDRDNKVKELNSSLLKQSSQIEQLQKALLEKKKEEVLFLQRMIEYVTDEVEKLVRENEVIRD DDKKVILQVIQATKSVLVEEAAQYLPGETSVPSFMEDPGYTSGCSTPTNSCHTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43140; Mature: 43009
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLLSEANAFYFVASSLATLTLLTSLALIVTSNVPLPLILALATLSVLVLALSYKIISN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC NVELEAKVKGQLEHKEEMLSLEHQELRDENTRLNERVDSLMEELCQCKLESEKNKLCLKS CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHC EYEDELRLRLEYEDELNLELEHKSREASSLRTQLTMLRKKVEVEEVKQLKTLESEEQHES CCCCHHEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SESDIEELEKKLCQSEKEKKELEGKVSDERQKRTDLESKVDKLCTKEKEYLSKIKELEKE CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLSLQKEEKESDNTLTTVNDDRDNKVKELNSSLLKQSSQIEQLQKALLEKKKEEVLFLQR HHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MIEYVTDEVEKLVRENEVIRDDDKKVILQVIQATKSVLVEEAAQYLPGETSVPSFMEDPG HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCC YTSGCSTPTNSCHTF CCCCCCCCCCCCCCC >Mature Secondary Structure SNLLSEANAFYFVASSLATLTLLTSLALIVTSNVPLPLILALATLSVLVLALSYKIISN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC NVELEAKVKGQLEHKEEMLSLEHQELRDENTRLNERVDSLMEELCQCKLESEKNKLCLKS CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHC EYEDELRLRLEYEDELNLELEHKSREASSLRTQLTMLRKKVEVEEVKQLKTLESEEQHES CCCCHHEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SESDIEELEKKLCQSEKEKKELEGKVSDERQKRTDLESKVDKLCTKEKEYLSKIKELEKE CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLSLQKEEKESDNTLTTVNDDRDNKVKELNSSLLKQSSQIEQLQKALLEKKKEEVLFLQR HHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MIEYVTDEVEKLVRENEVIRDDDKKVILQVIQATKSVLVEEAAQYLPGETSVPSFMEDPG HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCC YTSGCSTPTNSCHTF CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA