| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630070
Identifier: 225630070
GI number: 225630070
Start: 254563
End: 255492
Strand: Direct
Name: 225630070
Synonym: WRi_002450
Alternate gene names: NA
Gene position: 254563-255492 (Clockwise)
Preceding gene: 225630069
Following gene: 225630075
Centisome position: 17.61
GC content: 30.97
Gene sequence:
>930_bases ATGATAACTAGAATATCTATTACTTTATTTTTGATTTTCATTTCATGTGTCTATTTTTTTATTACTTATATTAGTAATGA TACACACATTGAGCAAGTACAACCCTTAAAATTAGAAACAGATAATAATGAAAGTGTAATACGTTCTGAAGAGGTTACTG AAAAAGAAATACTAATAAATGATTTAAAATATCAAGAACTTGAAAGTAGTCCTATTAAGCAACCTTCTATTCTCCAAGTA GCTAATCAGAAAAATATGTGGTCACGTATTGCAGATCAAGCTGAGCCTACAAAAGAAAAATCAAAAAAACTTGATTTTTA TGTTAGCGCTAACGGTGGTAAGGTATACCATGATAATTCAGAAACATTTGTAAAGGGTATACAAGAAATAGGAAAAAGAG TCCTAACTTTAGTTGAAAGTCATTATGGTTTTATAATAAAAAATATAGTGGCAAATGAAATTAAAAGTATACAGCAATTT GATGGTAAAATTGATTTCCAGTGGCTTAACAGCATATCTTTAGGTTACTATGCTGGAGAAAATGGCCGAGTTGATTTTGA AACCATGTATTCTAGAGCCAATATTGAAAATAGTAATTCTCCTCTGGTATTTGATAAATCAGCAAGTATATTTGCGTTTT TGTTAAACTTCTATTATAATCCCAGCGTTCAGGATATACAATTTGCTCCGTACATCGGTCTTGGTATAGGGCCAACAGTT TTTAGATTAAAAAGGATTAGTGGGTCACCCCAAAATTCAATGCCACTTAATGTTCCTTGGTTTGCTTATCAAATGAAACT TGGTGTTGATTATTCAATAATCCCAGAAGTCAAAACCTTTCTCGGCTATCGTTACTTTAGCGTTCCGATACCTGTTGCAG ATGACATATCTACTCACAATATTGAAATTGGTTTGATATTTAATTTTTAG
Upstream 100 bases:
>100_bases AAATAATTATCTAATTGGAAATATTTTTTCTTAATTTTTGTACATTGAAGAAATATACGATATAGTAATTATACTGTAAA TGATAATTGTGAATTCATTT
Downstream 100 bases:
>100_bases TGATAATTTAATATATATATAAATTCTTATCTTTTCTATCTAACAAACCAAATGTTGGTACGATTGTTGCTTTTAAAAAA ATGACAGTTTCTACTGTTCT
Product: surface antigen-related protein
Products: NA
Alternate protein names: Outer Surface Protein Wsp
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MITRISITLFLIFISCVYFFITYISNDTHIEQVQPLKLETDNNESVIRSEEVTEKEILINDLKYQELESSPIKQPSILQV ANQKNMWSRIADQAEPTKEKSKKLDFYVSANGGKVYHDNSETFVKGIQEIGKRVLTLVESHYGFIIKNIVANEIKSIQQF DGKIDFQWLNSISLGYYAGENGRVDFETMYSRANIENSNSPLVFDKSASIFAFLLNFYYNPSVQDIQFAPYIGLGIGPTV FRLKRISGSPQNSMPLNVPWFAYQMKLGVDYSIIPEVKTFLGYRYFSVPIPVADDISTHNIEIGLIFNF
Sequences:
>Translated_309_residues MITRISITLFLIFISCVYFFITYISNDTHIEQVQPLKLETDNNESVIRSEEVTEKEILINDLKYQELESSPIKQPSILQV ANQKNMWSRIADQAEPTKEKSKKLDFYVSANGGKVYHDNSETFVKGIQEIGKRVLTLVESHYGFIIKNIVANEIKSIQQF DGKIDFQWLNSISLGYYAGENGRVDFETMYSRANIENSNSPLVFDKSASIFAFLLNFYYNPSVQDIQFAPYIGLGIGPTV FRLKRISGSPQNSMPLNVPWFAYQMKLGVDYSIIPEVKTFLGYRYFSVPIPVADDISTHNIEIGLIFNF >Mature_309_residues MITRISITLFLIFISCVYFFITYISNDTHIEQVQPLKLETDNNESVIRSEEVTEKEILINDLKYQELESSPIKQPSILQV ANQKNMWSRIADQAEPTKEKSKKLDFYVSANGGKVYHDNSETFVKGIQEIGKRVLTLVESHYGFIIKNIVANEIKSIQQF DGKIDFQWLNSISLGYYAGENGRVDFETMYSRANIENSNSPLVFDKSASIFAFLLNFYYNPSVQDIQFAPYIGLGIGPTV FRLKRISGSPQNSMPLNVPWFAYQMKLGVDYSIIPEVKTFLGYRYFSVPIPVADDISTHNIEIGLIFNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35363; Mature: 35363
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITRISITLFLIFISCVYFFITYISNDTHIEQVQPLKLETDNNESVIRSEEVTEKEILIN CEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEECCCCCCEEECHHCHHHHHHHH DLKYQELESSPIKQPSILQVANQKNMWSRIADQAEPTKEKSKKLDFYVSANGGKVYHDNS HHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHCCCCCHHHCCCEEEEEECCCCEEEECCC ETFVKGIQEIGKRVLTLVESHYGFIIKNIVANEIKSIQQFDGKIDFQWLNSISLGYYAGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEECC NGRVDFETMYSRANIENSNSPLVFDKSASIFAFLLNFYYNPSVQDIQFAPYIGLGIGPTV CCCEEHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCEEECCEECCCCCHHH FRLKRISGSPQNSMPLNVPWFAYQMKLGVDYSIIPEVKTFLGYRYFSVPIPVADDISTHN HHHHHCCCCCCCCCCCCCCEEEEEEEECCCEEEHHHHHHHHCEEEEEECCCCCCCCCCCE IEIGLIFNF EEEEEEEEC >Mature Secondary Structure MITRISITLFLIFISCVYFFITYISNDTHIEQVQPLKLETDNNESVIRSEEVTEKEILIN CEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEECCCCCCEEECHHCHHHHHHHH DLKYQELESSPIKQPSILQVANQKNMWSRIADQAEPTKEKSKKLDFYVSANGGKVYHDNS HHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHCCCCCHHHCCCEEEEEECCCCEEEECCC ETFVKGIQEIGKRVLTLVESHYGFIIKNIVANEIKSIQQFDGKIDFQWLNSISLGYYAGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEECC NGRVDFETMYSRANIENSNSPLVFDKSASIFAFLLNFYYNPSVQDIQFAPYIGLGIGPTV CCCEEHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCEEECCEECCCCCHHH FRLKRISGSPQNSMPLNVPWFAYQMKLGVDYSIIPEVKTFLGYRYFSVPIPVADDISTHN HHHHHCCCCCCCCCCCCCCEEEEEEEECCCEEEHHHHHHHHCEEEEEECCCCCCCCCCCE IEIGLIFNF EEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA