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The map label for this gene is rmuC [H]

Identifier: 225630067

GI number: 225630067

Start: 247549

End: 248880

Strand: Direct

Name: rmuC [H]

Synonym: WRi_002400

Alternate gene names: 225630067

Gene position: 247549-248880 (Clockwise)

Preceding gene: 225630066

Following gene: 225630069

Centisome position: 17.12

GC content: 36.19

Gene sequence:

>1332_bases
ATGCTTTTCAATTCTATAGCTCTGGTTGTCTCTCTATTACTATTTTTCTACATTATCGTAAAAAAACTGAGCGAAAAGAA
AGCAAACCTTGAGGGTAATTTATGTAAATTAGAGCAAGAACTTCAAGAAACAAAGCAAACTTTGCTTACGAAGAATGAAG
AAATAGTTGATTTAAGGGTCAAAAGAGCAGAACTTGAAGTAACTCTGCAAAAAGAACGTGAGGAAAAGAAAAAGGAAATA
GAATTACTAACAAAAGCAGAGGAGAGATTAACAAACACTTTTAAAGCGCTCTCTCTTGATGCTTTGCAAACAAATAACAA
TAATTTTCTGAACTTAGCAAAGGAAGTAATCGATAGTAAATTAAAAGAAACGGAAAGCGATTTCAAAAAAAGACAAGCAA
CGATCAACGAAGTTGTAACTCCAATAAAAGAAAAATTAGAAAAATTCGATAATGAAATACGTGAGCTAGAAAAGGAGAGG
GTAGGGGCCTATGAAGGTTTAAAGGAGCAAATTGGAGCGCTGATGAACCAAACTTCCAACCTTGCTAATGCCCTGAGGAA
ACCTCACATTAGGGGCAAATGGGGTGAAATGCAACTCAAAAGAGTGGTAGAAATGGCAGGAATGATTGAGTATTGCGATT
TTTTTACTCAGCCGTCAGTGATTGATAAAAACGAGGATAATTTATTGCGTCCTGATTTAATAATCAAAATGCCATCTGGA
AAGCAAATAATAATAGATGCTAAAGTGCCGCTTGATTCTTACATGGATGCTATATCACAAAATGATTTGCAAATACAAAA
GGAGAAATTAAAGAACCATTCCCTGGCAATAAAAAAACACATAAATGACTTGGGTAAAAAAGAGTATTGGAATCAATTTG
AAAATACGCCAGAACTTGTGGTGCTTTTCTTAACAGGGGAGGGGGTTTTTAGCGCAGCACTGGAATATGAGCCTGCTTTG
ATAGAGATTGGAGTGGAAAAAAAAGTGATCATTGCAACACCGATCACTCTAATTGCGTTGCTGAGAGCAATAGCGTATGG
ATGGAAGCAAGAGATGATAGCTGAAAACGCAAAGAAAATCAGTGAACTAGGTCATATTTTATATGAGCGCATTTGCACAA
TGGGTGAAAACTTTGATAATTTGCGCAGGAGCTTAAAAAGTGCTGTTGATCATTATAATAAAACTGCTGGCTCTCTTGAA
GCAAGGGTGTTTCCTGCTGCTCGAGAATTCAATAAGCTTGGTATACATGCAAAAAATAAAAGTTTAAGTGCTGCAAAGGA
ATTAGAGTCTTTACCACGCAGTTTACATACTGAGGGGCTGAAAGTAGATTAG

Upstream 100 bases:

>100_bases
TCTACTTTTTCTGGGTAAGGTCACCTCTTTAGGTGCTCCTTTTTTCTTTCTTATACACACAAAAATCATATAGAATTGTA
AATACAGCTTTTTTATTCTG

Downstream 100 bases:

>100_bases
GCATCTTAACAGGGAATGTTCAAAAAACCATACGCGTCAAGTTAAGGAATGTAGAGAGCTTAAAGTAGATACCCTGGTCT
TCCTATATCTGTCTTTCAAA

Product: DNA recombination protein rmuC-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MLFNSIALVVSLLLFFYIIVKKLSEKKANLEGNLCKLEQELQETKQTLLTKNEEIVDLRVKRAELEVTLQKEREEKKKEI
ELLTKAEERLTNTFKALSLDALQTNNNNFLNLAKEVIDSKLKETESDFKKRQATINEVVTPIKEKLEKFDNEIRELEKER
VGAYEGLKEQIGALMNQTSNLANALRKPHIRGKWGEMQLKRVVEMAGMIEYCDFFTQPSVIDKNEDNLLRPDLIIKMPSG
KQIIIDAKVPLDSYMDAISQNDLQIQKEKLKNHSLAIKKHINDLGKKEYWNQFENTPELVVLFLTGEGVFSAALEYEPAL
IEIGVEKKVIIATPITLIALLRAIAYGWKQEMIAENAKKISELGHILYERICTMGENFDNLRRSLKSAVDHYNKTAGSLE
ARVFPAAREFNKLGIHAKNKSLSAAKELESLPRSLHTEGLKVD

Sequences:

>Translated_443_residues
MLFNSIALVVSLLLFFYIIVKKLSEKKANLEGNLCKLEQELQETKQTLLTKNEEIVDLRVKRAELEVTLQKEREEKKKEI
ELLTKAEERLTNTFKALSLDALQTNNNNFLNLAKEVIDSKLKETESDFKKRQATINEVVTPIKEKLEKFDNEIRELEKER
VGAYEGLKEQIGALMNQTSNLANALRKPHIRGKWGEMQLKRVVEMAGMIEYCDFFTQPSVIDKNEDNLLRPDLIIKMPSG
KQIIIDAKVPLDSYMDAISQNDLQIQKEKLKNHSLAIKKHINDLGKKEYWNQFENTPELVVLFLTGEGVFSAALEYEPAL
IEIGVEKKVIIATPITLIALLRAIAYGWKQEMIAENAKKISELGHILYERICTMGENFDNLRRSLKSAVDHYNKTAGSLE
ARVFPAAREFNKLGIHAKNKSLSAAKELESLPRSLHTEGLKVD
>Mature_443_residues
MLFNSIALVVSLLLFFYIIVKKLSEKKANLEGNLCKLEQELQETKQTLLTKNEEIVDLRVKRAELEVTLQKEREEKKKEI
ELLTKAEERLTNTFKALSLDALQTNNNNFLNLAKEVIDSKLKETESDFKKRQATINEVVTPIKEKLEKFDNEIRELEKER
VGAYEGLKEQIGALMNQTSNLANALRKPHIRGKWGEMQLKRVVEMAGMIEYCDFFTQPSVIDKNEDNLLRPDLIIKMPSG
KQIIIDAKVPLDSYMDAISQNDLQIQKEKLKNHSLAIKKHINDLGKKEYWNQFENTPELVVLFLTGEGVFSAALEYEPAL
IEIGVEKKVIIATPITLIALLRAIAYGWKQEMIAENAKKISELGHILYERICTMGENFDNLRRSLKSAVDHYNKTAGSLE
ARVFPAAREFNKLGIHAKNKSLSAAKELESLPRSLHTEGLKVD

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

Organism=Escherichia coli, GI1790266, Length=447, Percent_Identity=26.3982102908277, Blast_Score=139, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 50593; Mature: 50593

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLFNSIALVVSLLLFFYIIVKKLSEKKANLEGNLCKLEQELQETKQTLLTKNEEIVDLRV
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
KRAELEVTLQKEREEKKKEIELLTKAEERLTNTFKALSLDALQTNNNNFLNLAKEVIDSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LKETESDFKKRQATINEVVTPIKEKLEKFDNEIRELEKERVGAYEGLKEQIGALMNQTSN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LANALRKPHIRGKWGEMQLKRVVEMAGMIEYCDFFTQPSVIDKNEDNLLRPDLIIKMPSG
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCC
KQIIIDAKVPLDSYMDAISQNDLQIQKEKLKNHSLAIKKHINDLGKKEYWNQFENTPELV
CEEEEECCCCHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCEE
VLFLTGEGVFSAALEYEPALIEIGVEKKVIIATPITLIALLRAIAYGWKQEMIAENAKKI
EEEEECCCHHHHHHHCCCCEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
SELGHILYERICTMGENFDNLRRSLKSAVDHYNKTAGSLEARVFPAAREFNKLGIHAKNK
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHCCCCCCCC
SLSAAKELESLPRSLHTEGLKVD
HHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA