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The map label for this gene is oxaA [H]

Identifier: 225630056

GI number: 225630056

Start: 234564

End: 236264

Strand: Direct

Name: oxaA [H]

Synonym: WRi_002260

Alternate gene names: 225630056

Gene position: 234564-236264 (Clockwise)

Preceding gene: 225630055

Following gene: 225630057

Centisome position: 16.22

GC content: 31.63

Gene sequence:

>1701_bases
ATGTCAGAAGCAAAAAGTTTAATTTTGGCAGCTATCCTTTCCATGTTAATCATGGTGTCTTGGCGTATTATTTATGATAA
TTTTTTTAGTACAAACCAAAATCAGCCATTGATTGAACATATCGAATCTTTTAACGACCTTGCTCCTATAATACACCAGA
ATCGTTCTGAAATTATTAATTCTACTCGAGAACAGAGGGTTAGTTTAACCAATAACATGATTAAAGGATCAATTTCTCTG
AAAGGTGCAAGGTTTGATGACTTAATTTTAACTAATTACCACTTAGAACCGAGTTCTTCTTCTCCACAAGTGGTGTTACT
GTCACCTGCAGAATCAAAAGATGTATATTTCGCAGAATTTGGGTGGCTCGATCCGAGTAACAAGATTAAAGTTCCAGATT
CTAAAGCAGTCTGGCGAGCAGATAAACTTAATCAAAAAGAGGTCAATTTATCTTGGGACAATGAGAATGGCATTTTATTT
AGAATGAAAATTAACCTCGACGATAATTACATGTTTAAAGTTGAGCAAGTTGTTGAAAATAATACAAAGGATAATGTAGT
TTTGGTTCCTTATGGTAAAATCAACCGTAAACGTGATAATATTAATGAGTCTTATTGGATATCACATGAGGGAGTACTGG
GTGCATTTGATAATAAACTGGAGGAGTGGACGTATAAGGATATCTCCAAGAAACATTTAATAAAAGCAAATACAAGTGAA
AAAAATTGGTTTGGTTTTGCTGATAAATACTGGCTCACAGTCATCATACCTGAAAAATCTGATAAAATAAATGTAAGCAT
TAAACATACTAACGCTAATGATATTGATAAATTTCAAGTAGATTTTGTTAAGTCTTATAAGAGTATACTTCCTGGTGCAA
GCACTTCTAATGTGAATTATTTTTTTGCTGGAGCAAAAAAGTTGAATTTACTGGATTCTTATAAGGATACTCTCAATATA
CCTTTGTTTGATAAAGCTGTAGATTTTGGTGTTCTTTACTTTATAACTAAACCAGTGTTTTTACTGCTTGAATACTTTAA
CTTCGTTTTAAAGAATTTTGGCTTAGCAATATTATTGCTGACTTTAGTAATCAAACTTTTGATGCTTCCCTTATCTAATA
GATCATATGTTTCAATGTTCAAGGTGAAAAGCTTGCAGCCTGAGCTAACTCGTGTAAAAGAGTTGTATAAAAATGACAGC
TTAAAGCAGCATAAAGAGACAATTGCATTGTTTAAGAGAAACAACGTAAATCCAATGTCGAGCATTTTTCCCATGCTAAT
ACAAATACCGGTATTTTTTGCTCTATATAAAGTATTATTTGTTACTATAGAGATGAGGCATGCTCCTTTTTTTTTATGGA
TTAAGGATCTTTCAGCTCCTGACCCAACGAACATCTTTACATTATTTGGGTTGTTTAATTATAACTTTCCTATTTCTATA
GGCATTTTACCTATAATTTTCGGTGCCACCATGATAATTCAGCAGAAGCTAAGTGAGAAAGATCAAACCAGTAAAGATGA
TATTCAAGTAAATGTTATGAAGTTTTTACCTTACATTTCTGTCTTTATTTTTTCTTCTTTTCCTGCCGGCCTGGTAATAT
ATTGGATATTTAGTAATATTATAACTCTAATTCAACAGTCATTAATAAAGTTGTTTTTAACAAAAAAAGTGGTAGTAAAT
GTCGAGAATACTAATAGTTAA

Upstream 100 bases:

>100_bases
TAAGATTAGCGTTAAAAGTTATTATTCAAAATAAGTAAATTTCATTGTTTTAGTACAATATTTAGTATACACTTTAAGAA
GATATGTTTGATTTAATTTC

Downstream 100 bases:

>100_bases
TTCGATTTATTATACTGAAATAGCGAACCTTTTGCTTGAAGGTGCAATTGATAAATTAAAAGGCAGTAATGCCAGTTACG
ATGTAGTTGAGGTTCCTGGT

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 566; Mature: 565

Protein sequence:

>566_residues
MSEAKSLILAAILSMLIMVSWRIIYDNFFSTNQNQPLIEHIESFNDLAPIIHQNRSEIINSTREQRVSLTNNMIKGSISL
KGARFDDLILTNYHLEPSSSSPQVVLLSPAESKDVYFAEFGWLDPSNKIKVPDSKAVWRADKLNQKEVNLSWDNENGILF
RMKINLDDNYMFKVEQVVENNTKDNVVLVPYGKINRKRDNINESYWISHEGVLGAFDNKLEEWTYKDISKKHLIKANTSE
KNWFGFADKYWLTVIIPEKSDKINVSIKHTNANDIDKFQVDFVKSYKSILPGASTSNVNYFFAGAKKLNLLDSYKDTLNI
PLFDKAVDFGVLYFITKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLPLSNRSYVSMFKVKSLQPELTRVKELYKNDS
LKQHKETIALFKRNNVNPMSSIFPMLIQIPVFFALYKVLFVTIEMRHAPFFLWIKDLSAPDPTNIFTLFGLFNYNFPISI
GILPIIFGATMIIQQKLSEKDQTSKDDIQVNVMKFLPYISVFIFSSFPAGLVIYWIFSNIITLIQQSLIKLFLTKKVVVN
VENTNS

Sequences:

>Translated_566_residues
MSEAKSLILAAILSMLIMVSWRIIYDNFFSTNQNQPLIEHIESFNDLAPIIHQNRSEIINSTREQRVSLTNNMIKGSISL
KGARFDDLILTNYHLEPSSSSPQVVLLSPAESKDVYFAEFGWLDPSNKIKVPDSKAVWRADKLNQKEVNLSWDNENGILF
RMKINLDDNYMFKVEQVVENNTKDNVVLVPYGKINRKRDNINESYWISHEGVLGAFDNKLEEWTYKDISKKHLIKANTSE
KNWFGFADKYWLTVIIPEKSDKINVSIKHTNANDIDKFQVDFVKSYKSILPGASTSNVNYFFAGAKKLNLLDSYKDTLNI
PLFDKAVDFGVLYFITKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLPLSNRSYVSMFKVKSLQPELTRVKELYKNDS
LKQHKETIALFKRNNVNPMSSIFPMLIQIPVFFALYKVLFVTIEMRHAPFFLWIKDLSAPDPTNIFTLFGLFNYNFPISI
GILPIIFGATMIIQQKLSEKDQTSKDDIQVNVMKFLPYISVFIFSSFPAGLVIYWIFSNIITLIQQSLIKLFLTKKVVVN
VENTNS
>Mature_565_residues
SEAKSLILAAILSMLIMVSWRIIYDNFFSTNQNQPLIEHIESFNDLAPIIHQNRSEIINSTREQRVSLTNNMIKGSISLK
GARFDDLILTNYHLEPSSSSPQVVLLSPAESKDVYFAEFGWLDPSNKIKVPDSKAVWRADKLNQKEVNLSWDNENGILFR
MKINLDDNYMFKVEQVVENNTKDNVVLVPYGKINRKRDNINESYWISHEGVLGAFDNKLEEWTYKDISKKHLIKANTSEK
NWFGFADKYWLTVIIPEKSDKINVSIKHTNANDIDKFQVDFVKSYKSILPGASTSNVNYFFAGAKKLNLLDSYKDTLNIP
LFDKAVDFGVLYFITKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLPLSNRSYVSMFKVKSLQPELTRVKELYKNDSL
KQHKETIALFKRNNVNPMSSIFPMLIQIPVFFALYKVLFVTIEMRHAPFFLWIKDLSAPDPTNIFTLFGLFNYNFPISIG
ILPIIFGATMIIQQKLSEKDQTSKDDIQVNVMKFLPYISVFIFSSFPAGLVIYWIFSNIITLIQQSLIKLFLTKKVVVNV
ENTNS

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=529, Percent_Identity=28.3553875236295, Blast_Score=200, Evalue=2e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019998
- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 65252; Mature: 65120

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEAKSLILAAILSMLIMVSWRIIYDNFFSTNQNQPLIEHIESFNDLAPIIHQNRSEIIN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
STREQRVSLTNNMIKGSISLKGARFDDLILTNYHLEPSSSSPQVVLLSPAESKDVYFAEF
HHHHHHHHHHHHHEEEEEEECCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCEEEEEE
GWLDPSNKIKVPDSKAVWRADKLNQKEVNLSWDNENGILFRMKINLDDNYMFKVEQVVEN
CCCCCCCCEECCCCCCHHHHCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEHHHHCC
NTKDNVVLVPYGKINRKRDNINESYWISHEGVLGAFDNKLEEWTYKDISKKHLIKANTSE
CCCCCEEEEECCCCCCCCCCCCCCEEEECCCEEEHHHHHHHHHHHHHCCHHHEEECCCCC
KNWFGFADKYWLTVIIPEKSDKINVSIKHTNANDIDKFQVDFVKSYKSILPGASTSNVNY
CCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEE
FFAGAKKLNLLDSYKDTLNIPLFDKAVDFGVLYFITKPVFLLLEYFNFVLKNFGLAILLL
EEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLVIKLLMLPLSNRSYVSMFKVKSLQPELTRVKELYKNDSLKQHKETIALFKRNNVNPMS
HHHHHHHHCCCCCCCCEEEEEHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHH
SIFPMLIQIPVFFALYKVLFVTIEMRHAPFFLWIKDLSAPDPTNIFTLFGLFNYNFPISI
HHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEEECCCCCCCCCEEEEEHHCCCCCCHH
GILPIIFGATMIIQQKLSEKDQTSKDDIQVNVMKFLPYISVFIFSSFPAGLVIYWIFSNI
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
ITLIQQSLIKLFLTKKVVVNVENTNS
HHHHHHHHHHHHHCEEEEEEEECCCC
>Mature Secondary Structure 
SEAKSLILAAILSMLIMVSWRIIYDNFFSTNQNQPLIEHIESFNDLAPIIHQNRSEIIN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
STREQRVSLTNNMIKGSISLKGARFDDLILTNYHLEPSSSSPQVVLLSPAESKDVYFAEF
HHHHHHHHHHHHHEEEEEEECCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCEEEEEE
GWLDPSNKIKVPDSKAVWRADKLNQKEVNLSWDNENGILFRMKINLDDNYMFKVEQVVEN
CCCCCCCCEECCCCCCHHHHCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEHHHHCC
NTKDNVVLVPYGKINRKRDNINESYWISHEGVLGAFDNKLEEWTYKDISKKHLIKANTSE
CCCCCEEEEECCCCCCCCCCCCCCEEEECCCEEEHHHHHHHHHHHHHCCHHHEEECCCCC
KNWFGFADKYWLTVIIPEKSDKINVSIKHTNANDIDKFQVDFVKSYKSILPGASTSNVNY
CCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEE
FFAGAKKLNLLDSYKDTLNIPLFDKAVDFGVLYFITKPVFLLLEYFNFVLKNFGLAILLL
EEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLVIKLLMLPLSNRSYVSMFKVKSLQPELTRVKELYKNDSLKQHKETIALFKRNNVNPMS
HHHHHHHHCCCCCCCCEEEEEHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHH
SIFPMLIQIPVFFALYKVLFVTIEMRHAPFFLWIKDLSAPDPTNIFTLFGLFNYNFPISI
HHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEEECCCCCCCCCEEEEEHHCCCCCCHH
GILPIIFGATMIIQQKLSEKDQTSKDDIQVNVMKFLPYISVFIFSSFPAGLVIYWIFSNI
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
ITLIQQSLIKLFLTKKVVVNVENTNS
HHHHHHHHHHHHHCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA