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The map label for this gene is secF [H]

Identifier: 225630054

GI number: 225630054

Start: 231270

End: 232148

Strand: Direct

Name: secF [H]

Synonym: WRi_002230

Alternate gene names: 225630054

Gene position: 231270-232148 (Clockwise)

Preceding gene: 225630053

Following gene: 225630055

Centisome position: 16.0

GC content: 35.27

Gene sequence:

>879_bases
ATGGCACTTAGACTCATTCCAGATAACCTCAATATCAAGTTTAGTAAATATAGAAATTTGACAGCACTCGTTAGCATTAT
TCTTATCATCTTTTCAATGCTCATTGTTGTACTGCGTGGAGTGAACTTAGGCATAGACTTTGCAGGCGGAATTTTGATAG
AGATAAAATCTTCAGATGAGAATCACTCTATTCTCGATGCATTAAAAGAAAATGGTTTTACAGTGCAGAGTTCAAAAGCG
GGTGATAATTTAGTCATGCGTTTTAAAGATGAAGGAGATGAAGATAAAATCAAAAAGATAAAAAGCATACTAGAAGAAAA
GCTAGGTAGCTCAATAAGCTATCGTAAAATAGACTATGTTGGCCCACAAATAAGCTCAACACAAATATTTGAAGGAATGT
TATCCATGTTGATCGCGATTGTTGGAATATTTTTTTACGTTTGGTTTAGATTTAATTGGCAATGTGGATTCAGTGGAATA
ACAGCACTGATTCATGACGTGATTTTAACTGTTGGTTTTATTAGCCTAACTGGCATTGAGTTTAATATTTCATCAGTTGC
AGCTCTCCTCACTGTCATTGGTTATTCAATCAATAACTCAGTAATTATATACGATCGGATTCGAGAGTATTGCAAGAGTG
GTAAAAGTGGGCGGATGAGTGAGATAGTAGATGCAAGTATCAACGCTACATTATTTCGCACTATATTAACTTCTGGTACA
ACCCTTCTTGCTGCTCTTCCTTTGGCATTAATCTGCACAGATGCAGTGAAAGACTTCAGCTTGATCATTTTTTTTGGTAT
TTTGATTGGCACTTGTTCTGCAATATTTATTTCTGCTCCTATATTGACCTACAGAGCTTTAGATTGTAGAAGTGTTTAG

Upstream 100 bases:

>100_bases
CAAGAATTAACTGATGGAAAAATTGACATAATCAAACAATCACAGAATAAACTAGTGAATTTTTTGAAAAGTATATAAAA
TTCAAGTTTAAGTAAATAGC

Downstream 100 bases:

>100_bases
TCGCGGTATAATATCAACTTATTATCTCTTATAGTGAAATGAAAATACCTTAAAAAGCTCATTCCAAGTAGTGAATGAGA
CATAGAATGAGTGTTAACGC

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MALRLIPDNLNIKFSKYRNLTALVSIILIIFSMLIVVLRGVNLGIDFAGGILIEIKSSDENHSILDALKENGFTVQSSKA
GDNLVMRFKDEGDEDKIKKIKSILEEKLGSSISYRKIDYVGPQISSTQIFEGMLSMLIAIVGIFFYVWFRFNWQCGFSGI
TALIHDVILTVGFISLTGIEFNISSVAALLTVIGYSINNSVIIYDRIREYCKSGKSGRMSEIVDASINATLFRTILTSGT
TLLAALPLALICTDAVKDFSLIIFFGILIGTCSAIFISAPILTYRALDCRSV

Sequences:

>Translated_292_residues
MALRLIPDNLNIKFSKYRNLTALVSIILIIFSMLIVVLRGVNLGIDFAGGILIEIKSSDENHSILDALKENGFTVQSSKA
GDNLVMRFKDEGDEDKIKKIKSILEEKLGSSISYRKIDYVGPQISSTQIFEGMLSMLIAIVGIFFYVWFRFNWQCGFSGI
TALIHDVILTVGFISLTGIEFNISSVAALLTVIGYSINNSVIIYDRIREYCKSGKSGRMSEIVDASINATLFRTILTSGT
TLLAALPLALICTDAVKDFSLIIFFGILIGTCSAIFISAPILTYRALDCRSV
>Mature_291_residues
ALRLIPDNLNIKFSKYRNLTALVSIILIIFSMLIVVLRGVNLGIDFAGGILIEIKSSDENHSILDALKENGFTVQSSKAG
DNLVMRFKDEGDEDKIKKIKSILEEKLGSSISYRKIDYVGPQISSTQIFEGMLSMLIAIVGIFFYVWFRFNWQCGFSGIT
ALIHDVILTVGFISLTGIEFNISSVAALLTVIGYSINNSVIIYDRIREYCKSGKSGRMSEIVDASINATLFRTILTSGTT
LLAALPLALICTDAVKDFSLIIFFGILIGTCSAIFISAPILTYRALDCRSV

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=267, Percent_Identity=34.0823970037453, Blast_Score=163, Evalue=1e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 32141; Mature: 32010

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALRLIPDNLNIKFSKYRNLTALVSIILIIFSMLIVVLRGVNLGIDFAGGILIEIKSSDE
CEEEEECCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEECCCC
NHSILDALKENGFTVQSSKAGDNLVMRFKDEGDEDKIKKIKSILEEKLGSSISYRKIDYV
CHHHHHHHHHCCCEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEECCC
GPQISSTQIFEGMLSMLIAIVGIFFYVWFRFNWQCGFSGITALIHDVILTVGFISLTGIE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHHHCCCE
FNISSVAALLTVIGYSINNSVIIYDRIREYCKSGKSGRMSEIVDASINATLFRTILTSGT
ECHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCH
TLLAALPLALICTDAVKDFSLIIFFGILIGTCSAIFISAPILTYRALDCRSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ALRLIPDNLNIKFSKYRNLTALVSIILIIFSMLIVVLRGVNLGIDFAGGILIEIKSSDE
EEEEECCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEECCCC
NHSILDALKENGFTVQSSKAGDNLVMRFKDEGDEDKIKKIKSILEEKLGSSISYRKIDYV
CHHHHHHHHHCCCEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEECCC
GPQISSTQIFEGMLSMLIAIVGIFFYVWFRFNWQCGFSGITALIHDVILTVGFISLTGIE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHHHCCCE
FNISSVAALLTVIGYSINNSVIIYDRIREYCKSGKSGRMSEIVDASINATLFRTILTSGT
ECHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCH
TLLAALPLALICTDAVKDFSLIIFFGILIGTCSAIFISAPILTYRALDCRSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA