| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is leuS [H]
Identifier: 225629915
GI number: 225629915
Start: 54797
End: 57313
Strand: Direct
Name: leuS [H]
Synonym: WRi_000480
Alternate gene names: 225629915
Gene position: 54797-57313 (Clockwise)
Preceding gene: 225629914
Following gene: 225629916
Centisome position: 3.79
GC content: 38.62
Gene sequence:
>2517_bases ATGAAATATGATTTTAAAAACGTCGAAAGGTTTTGTCAAGATAAATGGGATTTTTCTGTAAGCAAGAGTAGTAAACAAGA GAAATGTTACGTATTGGAGATGTTTCCATATCCATCTGGTAAAATTCATATGGGGCACTTACGTAACTATGCAATAGGGG ATGTGATAGCGCGTTACAAGAGAGCTCGTGGATTTGAGGTTTTGCATCCAATTGGCTGGGATGCGTTTGGATTACCAGCT GAAAATGCAGCAAGGGACAACAATATTAGCCCTGAAATATGGACAAAAGAGAATATAGATAATATGCGTGCACAGTTGAA ATCTATAGGTCTTTCTTATAATTGGAACCGTGAACTTTCCACGTGTGAGCCTAATTATTACACACATGAACAAAAATTTT TCCTGGATTTTTTAAAGCATGGGCTTGCCTATCGAAAAGAGTCATGGGTTAACTGGGACCCGGTAGACCAAACAGTGCTT GCAAATGAACAGGTGGTTGATGGAAAAGGATGGCGATCAGGTGCAGTTGTTGAAAAACGTAAGTTATCCCAATGGTTTTT AAAGATTACTGATTTTGCTGAAGATTTACTCAAGTGCCTGCAAAGTTTGAAAAATTGGCCAGAAAAAGTCAAAACAATGC AGGAGCGTTGGATAGGAAAATCTGAAGGAGCAACTATAGAGTTTGAAGTAGTTGGCTTAAATAAGAAATTGAAGGTTTTT ACAACTTATCCTCATACTTTGTTTGGGGCTTCTTTTTGTGCAGTGGCAGCAGAGCATCCTATTGTGCAGGATTTAAAGAA TGGTTCTTCTGTTGTCATCCCAGTGCTTGACACTGGGATCCAGGAAATAAAATCGAAAAGAGAGAACGATGAAAAAATAG GAGTTTACACCGGATTAAACGTCAAACATCCATTTCTTGATAAGGAATTGCCGCTTTACATAGCGAATTTTGTGTTGATG GAATATGGGGAAGGCGCGATTTTTGGTTGCCCTGCACATGATCAGCGTGACTTTGAATTTGCACAGAAATATAATTTGCC GATAATTCCCGTTATTTCTTCAGCCCACTTAGGTGTCATTCCAGCGCGTGACCAGAATTCTTACAATGGATCCCAGTGTC AAGCTACTCAGATGACAAAGGAGGCGTATACTGGTGATGGGGTAATGTTTAACTCCGAATTCTTAAACGGATTAATGGTT AGTGAAGCAAAGGAAGTAATTATTAAAAAGCTCAAAGAAAAAGGAATAGGCAAGAAAACAACAAACTATCGTTTGCACGA TTGGGGAGTTTCAAGACAGCGTTATTGGGGATGCCCTATACCTATCATATATTGCAAAGACTGTGGTACTGTTCCAGTGC CAGAAAAAGACCTGCCTGTAATACTGCCCGCGGATGTGGAATTCACAAGTGGTGGCAATCCACTTGATAAACATCCTACT TGGAAATTTGTTGATTGCCCAAAATGTGGAAAGCAAGCAGAGCGTGAAACTGATACGTTTGACACCTTTTTTGAATCCTC TTGGTATTTTGCTGCATTCTGTAGCGAAGATAAATCAATAGACAAAGATGCGTGTAATCGTTTTATGCCTGTTGATTATT ATATAGGTGGAATAGAGCATGCAATTCTGCATTTGCTTTACTCACGATTTTTCTGCCGTGCTTTAACCAAATGTGGCTAT TTTGATATTAAAGAGCCTTTCTCTACTTTAATCACTCAAGGAATGGTCTGCCATGCAACTTATAAAGACGAAAATGGTAA GTGGCTATTTCTCGCAGAAGCAAAAGAATTAATAGCGCGAGGTACAAAAGTTCAAGTGGGCAAAGTTGAAAAAATGAGCA AATCGAAAAAGAATACAGTTGACCCAAACTTTATCATAGAAAAGTATGGTGCTGATACTGCTCGCTTGTTTGTGTTGTCT GACACTCCTCCAGAGAAAGATATGGAATGGTCCGATGATGGTGTGGAAGGTTGTTCTCGTTATGTAAATAAATTGTGGCG TATGGTCATGCAGCTTAAGCCTGTGAATATGCACTATGATAACAAAAGTGTTACGGGTGGACTTCTAGAGTACAGAAAAA AAATTCATAAACTCTTACATGGACTTACAGATGACTTGGAAAACTGCAGATTAAACTGTGTAGTGGCAAAATTTCGTGAA ATGACGAATTTAATAGCTGAAATAGACGTAGCAGCTGGAAAATCTCTTATTGATGAAGGTATATGCATACTAATCAGAGT AATCGAACCATTTATGCCGCATTTAGCTGAAAGCCTATGGCAAGAAATAGGAGGTCAACCTTGGCCAAAAGCTGATGAAT CATTATTAGTTGACGATACGGTAACTATAGCAGTGCAGATCAATGGAAAGTTGCGTGCGACAATCGAAGTGGCAATTAAC TTACCTCAAGAAGAATTGAAGAAAATAGCGATAGACTCTGTGTCCAGTAAGATCGATCAAAACAAAGTTCGCACTGTATA TGCTGTACCAAATAAGATAGTAAATATAGTTATATAA
Upstream 100 bases:
>100_bases CACACAAGATAAAGACCCGCAGATGTGTTTCACAATACGGCATAATGGCCAAGCGGTTGATCCTTTGGCGCACACAAACT GTGATTAAATTTGGATTTAT
Downstream 100 bases:
>100_bases AAAATCCGTAGCGCATCTTTGACTTCATGGTTATACTCTTTTTAACATGCGATTATATCTTTTTTAATATAAAGGATATA TACTTATGCATTATATATTT
Product: leucyl-tRNA synthetase
Products: NA
Alternate protein names: Leucine--tRNA ligase; LeuRS [H]
Number of amino acids: Translated: 838; Mature: 838
Protein sequence:
>838_residues MKYDFKNVERFCQDKWDFSVSKSSKQEKCYVLEMFPYPSGKIHMGHLRNYAIGDVIARYKRARGFEVLHPIGWDAFGLPA ENAARDNNISPEIWTKENIDNMRAQLKSIGLSYNWNRELSTCEPNYYTHEQKFFLDFLKHGLAYRKESWVNWDPVDQTVL ANEQVVDGKGWRSGAVVEKRKLSQWFLKITDFAEDLLKCLQSLKNWPEKVKTMQERWIGKSEGATIEFEVVGLNKKLKVF TTYPHTLFGASFCAVAAEHPIVQDLKNGSSVVIPVLDTGIQEIKSKRENDEKIGVYTGLNVKHPFLDKELPLYIANFVLM EYGEGAIFGCPAHDQRDFEFAQKYNLPIIPVISSAHLGVIPARDQNSYNGSQCQATQMTKEAYTGDGVMFNSEFLNGLMV SEAKEVIIKKLKEKGIGKKTTNYRLHDWGVSRQRYWGCPIPIIYCKDCGTVPVPEKDLPVILPADVEFTSGGNPLDKHPT WKFVDCPKCGKQAERETDTFDTFFESSWYFAAFCSEDKSIDKDACNRFMPVDYYIGGIEHAILHLLYSRFFCRALTKCGY FDIKEPFSTLITQGMVCHATYKDENGKWLFLAEAKELIARGTKVQVGKVEKMSKSKKNTVDPNFIIEKYGADTARLFVLS DTPPEKDMEWSDDGVEGCSRYVNKLWRMVMQLKPVNMHYDNKSVTGGLLEYRKKIHKLLHGLTDDLENCRLNCVVAKFRE MTNLIAEIDVAAGKSLIDEGICILIRVIEPFMPHLAESLWQEIGGQPWPKADESLLVDDTVTIAVQINGKLRATIEVAIN LPQEELKKIAIDSVSSKIDQNKVRTVYAVPNKIVNIVI
Sequences:
>Translated_838_residues MKYDFKNVERFCQDKWDFSVSKSSKQEKCYVLEMFPYPSGKIHMGHLRNYAIGDVIARYKRARGFEVLHPIGWDAFGLPA ENAARDNNISPEIWTKENIDNMRAQLKSIGLSYNWNRELSTCEPNYYTHEQKFFLDFLKHGLAYRKESWVNWDPVDQTVL ANEQVVDGKGWRSGAVVEKRKLSQWFLKITDFAEDLLKCLQSLKNWPEKVKTMQERWIGKSEGATIEFEVVGLNKKLKVF TTYPHTLFGASFCAVAAEHPIVQDLKNGSSVVIPVLDTGIQEIKSKRENDEKIGVYTGLNVKHPFLDKELPLYIANFVLM EYGEGAIFGCPAHDQRDFEFAQKYNLPIIPVISSAHLGVIPARDQNSYNGSQCQATQMTKEAYTGDGVMFNSEFLNGLMV SEAKEVIIKKLKEKGIGKKTTNYRLHDWGVSRQRYWGCPIPIIYCKDCGTVPVPEKDLPVILPADVEFTSGGNPLDKHPT WKFVDCPKCGKQAERETDTFDTFFESSWYFAAFCSEDKSIDKDACNRFMPVDYYIGGIEHAILHLLYSRFFCRALTKCGY FDIKEPFSTLITQGMVCHATYKDENGKWLFLAEAKELIARGTKVQVGKVEKMSKSKKNTVDPNFIIEKYGADTARLFVLS DTPPEKDMEWSDDGVEGCSRYVNKLWRMVMQLKPVNMHYDNKSVTGGLLEYRKKIHKLLHGLTDDLENCRLNCVVAKFRE MTNLIAEIDVAAGKSLIDEGICILIRVIEPFMPHLAESLWQEIGGQPWPKADESLLVDDTVTIAVQINGKLRATIEVAIN LPQEELKKIAIDSVSSKIDQNKVRTVYAVPNKIVNIVI >Mature_838_residues MKYDFKNVERFCQDKWDFSVSKSSKQEKCYVLEMFPYPSGKIHMGHLRNYAIGDVIARYKRARGFEVLHPIGWDAFGLPA ENAARDNNISPEIWTKENIDNMRAQLKSIGLSYNWNRELSTCEPNYYTHEQKFFLDFLKHGLAYRKESWVNWDPVDQTVL ANEQVVDGKGWRSGAVVEKRKLSQWFLKITDFAEDLLKCLQSLKNWPEKVKTMQERWIGKSEGATIEFEVVGLNKKLKVF TTYPHTLFGASFCAVAAEHPIVQDLKNGSSVVIPVLDTGIQEIKSKRENDEKIGVYTGLNVKHPFLDKELPLYIANFVLM EYGEGAIFGCPAHDQRDFEFAQKYNLPIIPVISSAHLGVIPARDQNSYNGSQCQATQMTKEAYTGDGVMFNSEFLNGLMV SEAKEVIIKKLKEKGIGKKTTNYRLHDWGVSRQRYWGCPIPIIYCKDCGTVPVPEKDLPVILPADVEFTSGGNPLDKHPT WKFVDCPKCGKQAERETDTFDTFFESSWYFAAFCSEDKSIDKDACNRFMPVDYYIGGIEHAILHLLYSRFFCRALTKCGY FDIKEPFSTLITQGMVCHATYKDENGKWLFLAEAKELIARGTKVQVGKVEKMSKSKKNTVDPNFIIEKYGADTARLFVLS DTPPEKDMEWSDDGVEGCSRYVNKLWRMVMQLKPVNMHYDNKSVTGGLLEYRKKIHKLLHGLTDDLENCRLNCVVAKFRE MTNLIAEIDVAAGKSLIDEGICILIRVIEPFMPHLAESLWQEIGGQPWPKADESLLVDDTVTIAVQINGKLRATIEVAIN LPQEELKKIAIDSVSSKIDQNKVRTVYAVPNKIVNIVI
Specific function: Unknown
COG id: COG0495
COG function: function code J; Leucyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI7661872, Length=859, Percent_Identity=34.2258440046566, Blast_Score=479, Evalue=1e-135, Organism=Homo sapiens, GI5454158, Length=648, Percent_Identity=23.3024691358025, Blast_Score=99, Evalue=1e-20, Organism=Escherichia coli, GI1786861, Length=874, Percent_Identity=42.5629290617849, Blast_Score=706, Evalue=0.0, Organism=Escherichia coli, GI1790708, Length=372, Percent_Identity=22.8494623655914, Blast_Score=86, Evalue=7e-18, Organism=Caenorhabditis elegans, GI71997517, Length=194, Percent_Identity=50.5154639175258, Blast_Score=216, Evalue=3e-56, Organism=Caenorhabditis elegans, GI71997510, Length=194, Percent_Identity=50.5154639175258, Blast_Score=216, Evalue=4e-56, Organism=Caenorhabditis elegans, GI212645227, Length=373, Percent_Identity=28.4182305630027, Blast_Score=127, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6323414, Length=837, Percent_Identity=39.0681003584229, Blast_Score=552, Evalue=1e-158, Organism=Saccharomyces cerevisiae, GI6321531, Length=899, Percent_Identity=21.579532814238, Blast_Score=137, Evalue=6e-33, Organism=Drosophila melanogaster, GI21355409, Length=871, Percent_Identity=32.3765786452354, Blast_Score=434, Evalue=1e-122, Organism=Drosophila melanogaster, GI281366294, Length=793, Percent_Identity=20.9331651954603, Blast_Score=100, Evalue=4e-21,
Paralogues:
None
Copy number: 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR002300 - InterPro: IPR002302 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 - InterPro: IPR009008 [H]
Pfam domain/function: PF08264 Anticodon_1; PF00133 tRNA-synt_1 [H]
EC number: =6.1.1.4 [H]
Molecular weight: Translated: 95499; Mature: 95499
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYDFKNVERFCQDKWDFSVSKSSKQEKCYVLEMFPYPSGKIHMGHLRNYAIGDVIARYK CCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCEEHHHHCCHHHHHHHHHHH RARGFEVLHPIGWDAFGLPAENAARDNNISPEIWTKENIDNMRAQLKSIGLSYNWNRELS HHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC TCEPNYYTHEQKFFLDFLKHGLAYRKESWVNWDPVDQTVLANEQVVDGKGWRSGAVVEKR CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCEEECCCCCCCCCHHHHH KLSQWFLKITDFAEDLLKCLQSLKNWPEKVKTMQERWIGKSEGATIEFEVVGLNKKLKVF HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCEEEEE TTYPHTLFGASFCAVAAEHPIVQDLKNGSSVVIPVLDTGIQEIKSKRENDEKIGVYTGLN EECCHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCEEEEEECCC VKHPFLDKELPLYIANFVLMEYGEGAIFGCPAHDQRDFEFAQKYNLPIIPVISSAHLGVI CCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHCCCCEEEEECCCCEEEE PARDQNSYNGSQCQATQMTKEAYTGDGVMFNSEFLNGLMVSEAKEVIIKKLKEKGIGKKT ECCCCCCCCCCCCHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TNYRLHDWGVSRQRYWGCPIPIIYCKDCGTVPVPEKDLPVILPADVEFTSGGNPLDKHPT CCCEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEECCCEEECCCCCCCCCCCC WKFVDCPKCGKQAERETDTFDTFFESSWYFAAFCSEDKSIDKDACNRFMPVDYYIGGIEH EEEEECCHHCHHHHCCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHCCCCHHHHHCHHHH AILHLLYSRFFCRALTKCGYFDIKEPFSTLITQGMVCHATYKDENGKWLFLAEAKELIAR HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEEEEECCCCCEEEEECHHHHHHC GTKVQVGKVEKMSKSKKNTVDPNFIIEKYGADTARLFVLSDTPPEKDMEWSDDGVEGCSR CCEEEECCHHHHHHCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCCCCCCCCHHHHHHH YVNKLWRMVMQLKPVNMHYDNKSVTGGLLEYRKKIHKLLHGLTDDLENCRLNCVVAKFRE HHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEHHHHHHHHH MTNLIAEIDVAAGKSLIDEGICILIRVIEPFMPHLAESLWQEIGGQPWPKADESLLVDDT HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECE VTIAVQINGKLRATIEVAINLPQEELKKIAIDSVSSKIDQNKVRTVYAVPNKIVNIVI EEEEEEECCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCEEEEECCCCEEEEEC >Mature Secondary Structure MKYDFKNVERFCQDKWDFSVSKSSKQEKCYVLEMFPYPSGKIHMGHLRNYAIGDVIARYK CCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCEEHHHHCCHHHHHHHHHHH RARGFEVLHPIGWDAFGLPAENAARDNNISPEIWTKENIDNMRAQLKSIGLSYNWNRELS HHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC TCEPNYYTHEQKFFLDFLKHGLAYRKESWVNWDPVDQTVLANEQVVDGKGWRSGAVVEKR CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCEEECCCCCCCCCHHHHH KLSQWFLKITDFAEDLLKCLQSLKNWPEKVKTMQERWIGKSEGATIEFEVVGLNKKLKVF HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCEEEEE TTYPHTLFGASFCAVAAEHPIVQDLKNGSSVVIPVLDTGIQEIKSKRENDEKIGVYTGLN EECCHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCEEEEEECCC VKHPFLDKELPLYIANFVLMEYGEGAIFGCPAHDQRDFEFAQKYNLPIIPVISSAHLGVI CCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHCCCCEEEEECCCCEEEE PARDQNSYNGSQCQATQMTKEAYTGDGVMFNSEFLNGLMVSEAKEVIIKKLKEKGIGKKT ECCCCCCCCCCCCHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TNYRLHDWGVSRQRYWGCPIPIIYCKDCGTVPVPEKDLPVILPADVEFTSGGNPLDKHPT CCCEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEECCCEEECCCCCCCCCCCC WKFVDCPKCGKQAERETDTFDTFFESSWYFAAFCSEDKSIDKDACNRFMPVDYYIGGIEH EEEEECCHHCHHHHCCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHCCCCHHHHHCHHHH AILHLLYSRFFCRALTKCGYFDIKEPFSTLITQGMVCHATYKDENGKWLFLAEAKELIAR HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEEEEECCCCCEEEEECHHHHHHC GTKVQVGKVEKMSKSKKNTVDPNFIIEKYGADTARLFVLSDTPPEKDMEWSDDGVEGCSR CCEEEECCHHHHHHCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCCCCCCCCHHHHHHH YVNKLWRMVMQLKPVNMHYDNKSVTGGLLEYRKKIHKLLHGLTDDLENCRLNCVVAKFRE HHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEHHHHHHHHH MTNLIAEIDVAAGKSLIDEGICILIRVIEPFMPHLAESLWQEIGGQPWPKADESLLVDDT HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECE VTIAVQINGKLRATIEVAINLPQEELKKIAIDSVSSKIDQNKVRTVYAVPNKIVNIVI EEEEEEECCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCEEEEECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA