Definition Brachyspira hyodysenteriae WA1 chromosome, complete genome.
Accession NC_012225
Length 3,000,694

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The map label for this gene is pbpB

Identifier: 225619000

GI number:

Start: 47800

End: 50412

Strand: Reverse

Name: pbpB

Synonym: BHWA1_00050

Alternate gene names: NA

Gene position: NA

Preceding gene: 225619009

Following gene: 225618999

Centisome position: NA

GC content: NA

Gene sequence:

>2613_bases
ATGGAAAAAATTATCAGAAGAACTGCATTAACTATAATATATATATTATTATCTTCTTTAATAGTGCTGTCAATTATATT
CATACCAAAAGGATATAATTTTTATAAATACTGCAAAGAGTATATCAATAAACCTTTTTCAGAAAATGAACTTCGTACTA
ATGAAGAAAGAGCTTTAAAAATATACGATAGAAACTCAATACTAATATCAACAATATTTCCAGAGCATGGCGGTTTTTTT
GAGGAAGTAAAATATAATGATTTATCTACGAATTTAATAAATGCTGTTGTAAGTGCTGAGGACAAAAATTTCTTTAATCA
TAAAGGCATAGATTATAAAGCAATAATAAGAGCATTTTTATCAAATCTTATAAGCGGTAAAGTAGTATCAGGAGGAAGTA
CAATAACTCAGCAGCTTGCCAAAAATATTATTCCACGTGAAAGAACATATATAAATAAATTTTATGAAGCATTAGATGCG
ATAAGATTAGAAAGAAATCTCACAAAAGAGCAAATAATTACAGAATATTTAAATAGAGTATTTTTTGGAAATAACTGTTA
TGGTGTAGGTGCAGCAAGCGATTTATACTTTCATAAAAAAGCAAAAGATTTGAATAATAATGAATCTGCAATGCTTGCTT
CTATAATAAAATCAGGTACAAAATTCAATCCATATAAATATGAAGAAAGATTAAAATTAAGAAGAATATATGTACTTGGA
GAAATGAAAAATAATAACTTTATAACAGAAGAAAATTATAATAAATACACAAATGAAAAAATTAAAATTTTTGATGATAA
AGAGAAATACACTTTCAAAGCTCCGCATTTTACAATGTATGCAAAAGAATCATTAGAGCAATTAAAATATACAGGAGTAA
CAGAATTAAGAACAACATTAGATTATAATATGCAAAAGGAAGCCGTATTAGTTATAAGCAATTCAAGTCAGTCGCTTCAT
ACATTTAATGTAAGAAATATATCCTGTGTAATACTCAATGCCAAAACAGGAGAAGTACTTTCAATGATAGGATCTATGGA
TTACTTTGATGCTGAAACTCATGGAGCTGTTAATGGAGCTACTGCATTAAGACAAGCTGGAAGTACTTTAAAACCTTTTA
TGTATGCATATTTATTTGATAAAGGAGAATCCCCTGCTTCTGTTATAGCCGATATAAAAACTCATATCAATTCACCAGGC
GGAGATTATATACCAGAAAATTTCGATCATAAATACAGAGGTCCTGTTACCATAAGAGATGCATTAGCAAATTCTCTTAA
TATACCTGCTGTAAAATGGCTTGCTAGATATAGTATCAAAGATTTCCAAAATATACTTTTGAAATCCGGATTAAGTTCTA
TAGATAAAAACCCTGATTATTATGGTTATTCTTTAGTTTTAGGAAGTGCTGAAGTGCGTTTAATAGATTTAGCTTCAGCA
TATACTATATTTCCAAATTCAGGAACTTTTATAAACAATTATTCTATAACCTCATTAAAAAAATCTAACGGAGAAGTTAT
AAGATTACCTAAAAAAACTACAAGAAAAGTAATATCTGAAGAAAGTGCATATTTAATAACAAGTATATTATCTGACAGAA
ATGCAAGAATGGGTTCATTTAGAAGTTATAAAGGAATAGTTTATCCTTTCTCTATTGCAATAAAGACAGGTACTTCAAAA
GGTTCAAGAGATGCTTGGGCTATAGGTTATACAAAAGATTATATAGTTGGTATTTGGTTAGGTGATTTTGCAGGAAGCGA
GATGATTAATATAACAGGAGGAAACGGAGCTGTTCCTATACTTTATGATTTATTTACTATGCTAAATAAAAGTCAGAAAG
AAACTAAATGGGATAAACCAGATACTATAATAAAAAGAGAAATTTGTCTTATAAGCGGAAAACTTAGAGGAGAGTTCTGC
AAAGAAACTAGAATGGAAGAGTTTTCTCATATAAACGTACCAAAAGAAGAATGCGATGTGCATAATCTATATATAAAAAC
CAATTATGATGGTTCTATTAGTGAAAAAGTTTTTGTAAATCTTCCAAGTGAATATAATGGCTGGATTAGAGAACAGCAAA
TAGAACGCCCTACTGCAGAATGGACAAAAGTTAATAATATATATGCATATAATAGAATGAAAAACACTATCAATAATCAA
AACAGTAATTTAGAAAATCGTGCTGATAATATTACAGAAAATATTGATAATATAGAAAATAATTTTGCATACAATTCAAG
AGAAATACCTCAAATGAATTTAAATGCAGTAAATACACCTTTGGCATCATATGATAGAAATATTAACAATAATCAAAATA
ATAATATAAAAGAAAGGCTTTCAATAAAAGAACCTACTGATAACTCAGTATATAAAATAGATTCTACACTTCCTATAGAA
TATCAAAATATATTTATATCTTCATATATACCAAAAAATGTTGTAAGTGCTAATTTATACTGCAATAAAGAAATAATAGC
AGATCTTGATGATTTGAAAAAAGAGTATATAAGATGGAATTTAAAACATGGTGATTATTCTTTCTATATAGAAGCAAAAA
CAGATGAAGGTAAAATCATTAAAAGTTCAACTGTAAAAATATATGTACAGTAA

Upstream 100 bases:

>100_bases
TTATAATTACTATTTTCAACAAAAATAAATATATATAAACAAAATAACTATATACATTGTTCAATTTGACTATTTATAAG
TTTACTGTAGAATATGATAC

Downstream 100 bases:

>100_bases
AAAAAAATAGTATTGATAATTTTAATAATACCGTTAATATTAATAGTATAATATGATTTATCAATGGAGTTATCTATGTT
GAATAAAAAAATTATCTCTA

Product: penicillin-binding protein 2

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>870_residues
MEKIIRRTALTIIYILLSSLIVLSIIFIPKGYNFYKYCKEYINKPFSENELRTNEERALKIYDRNSILISTIFPEHGGFF
EEVKYNDLSTNLINAVVSAEDKNFFNHKGIDYKAIIRAFLSNLISGKVVSGGSTITQQLAKNIIPRERTYINKFYEALDA
IRLERNLTKEQIITEYLNRVFFGNNCYGVGAASDLYFHKKAKDLNNNESAMLASIIKSGTKFNPYKYEERLKLRRIYVLG
EMKNNNFITEENYNKYTNEKIKIFDDKEKYTFKAPHFTMYAKESLEQLKYTGVTELRTTLDYNMQKEAVLVISNSSQSLH
TFNVRNISCVILNAKTGEVLSMIGSMDYFDAETHGAVNGATALRQAGSTLKPFMYAYLFDKGESPASVIADIKTHINSPG
GDYIPENFDHKYRGPVTIRDALANSLNIPAVKWLARYSIKDFQNILLKSGLSSIDKNPDYYGYSLVLGSAEVRLIDLASA
YTIFPNSGTFINNYSITSLKKSNGEVIRLPKKTTRKVISEESAYLITSILSDRNARMGSFRSYKGIVYPFSIAIKTGTSK
GSRDAWAIGYTKDYIVGIWLGDFAGSEMINITGGNGAVPILYDLFTMLNKSQKETKWDKPDTIIKREICLISGKLRGEFC
KETRMEEFSHINVPKEECDVHNLYIKTNYDGSISEKVFVNLPSEYNGWIREQQIERPTAEWTKVNNIYAYNRMKNTINNQ
NSNLENRADNITENIDNIENNFAYNSREIPQMNLNAVNTPLASYDRNINNNQNNNIKERLSIKEPTDNSVYKIDSTLPIE
YQNIFISSYIPKNVVSANLYCNKEIIADLDDLKKEYIRWNLKHGDYSFYIEAKTDEGKIIKSSTVKIYVQ

Sequences:
NA

Specific function: NA

COG id: COG4953

COG function: function code M; Membrane carboxypeptidase/penicillin-binding protein PbpC

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA