| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527461
Identifier: 222527461
GI number: 222527461
Start: 975988
End: 977748
Strand: Direct
Name: 222527461
Synonym: Chy400_0776
Alternate gene names: NA
Gene position: 975988-977748 (Clockwise)
Preceding gene: 222524060
Following gene: 222524063
Centisome position: 18.52
GC content: 51.22
Gene sequence:
>1761_bases ATGAGCAACCTGTTGTTCAAAAAAGTTGATTATTCTGTCAGTAAACTGCTGGAAGACATCGCTATCGGCGAGATTGGCTT ACCTGACATCCAGCGCCCCTTCGTGTGGGATACCACCCGTGTTCGCGACTTATTCGATTCTATGTATCGCGGCTACCCCA TCGGCACCCTGCTCTTTTGAGAGAATGGTTATCCTGGTGAACACCGCACTATCGGTGCGCATGGTAAACAGAAGGTGCCT CACCTGCTCATTGTTGATGGCCAGCAACGCCTCACTGCCCTGTATGCAGTGATGAGGGGCGAGCCTGTTATTGATCAGGA GTTCCAGCGCCGATACATCAGAATCGCCTTTTCACCTCTCGAGGATCGCTTTGAAGTCACTAACACTGCCATCGAGCGCG ATCCATCCTGGATTGCCGACATCAGTATTCTCTGGCAACCTGAATTTGACCAATACGCCTTCGTTTCCGAATTTTTAGAC CGCCAGACCAGGCGTCACGAACTGGATGCTGACACCCGCAAACGCATTCCCGCCGCTATTCAGCGTGTTGTCAACCTCAG CAACTATCCAATGACCGCGTTGGAAATTTCGCTCAATGCCAATGAAGAGCAGGTGTCGGAAATCTTTGTGCGCATTAACA GCCGTGGTCGCACACTCAACCAGGCCGACTTTGTCCTGACGCTTATGTCTGTCTTTTGGGACGAGGGGCGCAAAGAACTG GAAGATTTTGCCCGCAAGACCAGACAACAACCCGCTGATAGGCAGCCTTCTCCCTACAACCTGTACTTCCGGCCTGCACC CGACCAGCTACTGCGCGTAGATGTAGCTCTGGCCTTTCGCCGTGCGCGACTCGAGCATGTCTATTCTATTTTACGGGGTA AAGACCTGCAGAGTGGCGAGTTTTCTGTTGAACGGCGTGATGAACAGTTCACAGTACTGAAAGAAGCGCAAGCCTATGTG TTGGACCTGCAACACTGGCATGAATTTATCAAGGTGATTAAACGAGCCGGCTTTATCCATCCGAAAATGATTACCTCTGA AACGGCTCTGACGTATACCTATGCCTTCTGGCTGATCGGCAAACGTGATTTTCAGCTCGATCTCTCTACTTTGCGGAATC TGATGGCCCGCTGGTTCTTTATGAGTTCACTGACCGGACGCAATACCGGATCACCTGAGTCTCGAATGAGTCTGGATCTG GCACTGCTGCGTGATTACACCAATCCTGACGATTTTATCCGTGCTTTAGAGCAGGAAATTCATGCAGTGTTTACTCCAGA TTACTGGAAGGTCACGCTTCCCAACAATCTGGCTACTGCCTCAGCTCGCAGTACCGGTCAGTCTGCCTACATTGCCGCCC TATGTATTCTGGATGGGCCGGTCCTCTACTCGCGTATGAAGATTCGCGATCTGTTAGACCCCAATACCCAGGCCAGGAAA GAAGCATTGGAGCGACATCATCTCTTTCCGCGTAAATATCTGGCACGCCAGAAGATCACCGAACAGCGCGACGTCAACCA GGTAGCCAACTATGCGCTGGTCGAATGGCACGATAACATCGATATCAGTGACCAGCCACCGACTGTATACGCACCACAAT ACGAAAAACAGTTTTCCCCAGCCGAACTGAAAGAGATGTATCGCTTTCACGCCCTGCCTGAACAGTGGTACACCATGGAC TATTTCACGTTCCTGGAGCAACGTCGCCAGCTTATGGCGGATATTATTCGGCAGGGGTTCATGCACCTTTCGCAAAGGTA G
Upstream 100 bases:
>100_bases GTGCCAAAGGGGTTATTTTAGTCACTATCGCACTGTCTGGTGATGCCAATGTTTGCCTGCCGCGTAATGTCGTTATTTAC TTCGAGGAGAGATGACCATT
Downstream 100 bases:
>100_bases GACTGACATTACCAGAACCTGTTTCAAAAACATTCACGACCAGTGATCTCATTCATTCCTGACAGACTCTATGAACGTGA CGAGCACCCATAGCATCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 586; Mature: 585
Protein sequence:
>586_residues MSNLLFKKVDYSVSKLLEDIAIGEIGLPDIQRPFVWDTTRVRDLFDSMYRGYPIGTLLFUENGYPGEHRTIGAHGKQKVP HLLIVDGQQRLTALYAVMRGEPVIDQEFQRRYIRIAFSPLEDRFEVTNTAIERDPSWIADISILWQPEFDQYAFVSEFLD RQTRRHELDADTRKRIPAAIQRVVNLSNYPMTALEISLNANEEQVSEIFVRINSRGRTLNQADFVLTLMSVFWDEGRKEL EDFARKTRQQPADRQPSPYNLYFRPAPDQLLRVDVALAFRRARLEHVYSILRGKDLQSGEFSVERRDEQFTVLKEAQAYV LDLQHWHEFIKVIKRAGFIHPKMITSETALTYTYAFWLIGKRDFQLDLSTLRNLMARWFFMSSLTGRNTGSPESRMSLDL ALLRDYTNPDDFIRALEQEIHAVFTPDYWKVTLPNNLATASARSTGQSAYIAALCILDGPVLYSRMKIRDLLDPNTQARK EALERHHLFPRKYLARQKITEQRDVNQVANYALVEWHDNIDISDQPPTVYAPQYEKQFSPAELKEMYRFHALPEQWYTMD YFTFLEQRRQLMADIIRQGFMHLSQR
Sequences:
>Translated_586_residues MSNLLFKKVDYSVSKLLEDIAIGEIGLPDIQRPFVWDTTRVRDLFDSMYRGYPIGTLLF*ENGYPGEHRTIGAHGKQKVP HLLIVDGQQRLTALYAVMRGEPVIDQEFQRRYIRIAFSPLEDRFEVTNTAIERDPSWIADISILWQPEFDQYAFVSEFLD RQTRRHELDADTRKRIPAAIQRVVNLSNYPMTALEISLNANEEQVSEIFVRINSRGRTLNQADFVLTLMSVFWDEGRKEL EDFARKTRQQPADRQPSPYNLYFRPAPDQLLRVDVALAFRRARLEHVYSILRGKDLQSGEFSVERRDEQFTVLKEAQAYV LDLQHWHEFIKVIKRAGFIHPKMITSETALTYTYAFWLIGKRDFQLDLSTLRNLMARWFFMSSLTGRNTGSPESRMSLDL ALLRDYTNPDDFIRALEQEIHAVFTPDYWKVTLPNNLATASARSTGQSAYIAALCILDGPVLYSRMKIRDLLDPNTQARK EALERHHLFPRKYLARQKITEQRDVNQVANYALVEWHDNIDISDQPPTVYAPQYEKQFSPAELKEMYRFHALPEQWYTMD YFTFLEQRRQLMADIIRQGFMHLSQR >Mature_585_residues SNLLFKKVDYSVSKLLEDIAIGEIGLPDIQRPFVWDTTRVRDLFDSMYRGYPIGTLLF*ENGYPGEHRTIGAHGKQKVPH LLIVDGQQRLTALYAVMRGEPVIDQEFQRRYIRIAFSPLEDRFEVTNTAIERDPSWIADISILWQPEFDQYAFVSEFLDR QTRRHELDADTRKRIPAAIQRVVNLSNYPMTALEISLNANEEQVSEIFVRINSRGRTLNQADFVLTLMSVFWDEGRKELE DFARKTRQQPADRQPSPYNLYFRPAPDQLLRVDVALAFRRARLEHVYSILRGKDLQSGEFSVERRDEQFTVLKEAQAYVL DLQHWHEFIKVIKRAGFIHPKMITSETALTYTYAFWLIGKRDFQLDLSTLRNLMARWFFMSSLTGRNTGSPESRMSLDLA LLRDYTNPDDFIRALEQEIHAVFTPDYWKVTLPNNLATASARSTGQSAYIAALCILDGPVLYSRMKIRDLLDPNTQARKE ALERHHLFPRKYLARQKITEQRDVNQVANYALVEWHDNIDISDQPPTVYAPQYEKQFSPAELKEMYRFHALPEQWYTMDY FTFLEQRRQLMADIIRQGFMHLSQR
Specific function: Unknown
COG id: COG1479
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68613; Mature: 68482
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLLFKKVDYSVSKLLEDIAIGEIGLPDIQRPFVWDTTRVRDLFDSMYRGYPIGTLLFE CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEC NGYPGEHRTIGAHGKQKVPHLLIVDGQQRLTALYAVMRGEPVIDQEFQRRYIRIAFSPLE CCCCCCCCEECCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHEEEEEECCCH DRFEVTNTAIERDPSWIADISILWQPEFDQYAFVSEFLDRQTRRHELDADTRKRIPAAIQ HHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH RVVNLSNYPMTALEISLNANEEQVSEIFVRINSRGRTLNQADFVLTLMSVFWDEGRKELE HHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHH DFARKTRQQPADRQPSPYNLYFRPAPDQLLRVDVALAFRRARLEHVYSILRGKDLQSGEF HHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SVERRDEQFTVLKEAQAYVLDLQHWHEFIKVIKRAGFIHPKMITSETALTYTYAFWLIGK CHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHEEEEEHEECC RDFQLDLSTLRNLMARWFFMSSLTGRNTGSPESRMSLDLALLRDYTNPDDFIRALEQEIH CCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH AVFTPDYWKVTLPNNLATASARSTGQSAYIAALCILDGPVLYSRMKIRDLLDPNTQARKE EEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHH ALERHHLFPRKYLARQKITEQRDVNQVANYALVEWHDNIDISDQPPTVYAPQYEKQFSPA HHHHHCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCEEECCCHHCCCCHH ELKEMYRFHALPEQWYTMDYFTFLEQRRQLMADIIRQGFMHLSQR HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SNLLFKKVDYSVSKLLEDIAIGEIGLPDIQRPFVWDTTRVRDLFDSMYRGYPIGTLLFE CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEC NGYPGEHRTIGAHGKQKVPHLLIVDGQQRLTALYAVMRGEPVIDQEFQRRYIRIAFSPLE CCCCCCCCEECCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHEEEEEECCCH DRFEVTNTAIERDPSWIADISILWQPEFDQYAFVSEFLDRQTRRHELDADTRKRIPAAIQ HHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH RVVNLSNYPMTALEISLNANEEQVSEIFVRINSRGRTLNQADFVLTLMSVFWDEGRKELE HHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHH DFARKTRQQPADRQPSPYNLYFRPAPDQLLRVDVALAFRRARLEHVYSILRGKDLQSGEF HHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SVERRDEQFTVLKEAQAYVLDLQHWHEFIKVIKRAGFIHPKMITSETALTYTYAFWLIGK CHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHEEEEEHEECC RDFQLDLSTLRNLMARWFFMSSLTGRNTGSPESRMSLDLALLRDYTNPDDFIRALEQEIH CCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH AVFTPDYWKVTLPNNLATASARSTGQSAYIAALCILDGPVLYSRMKIRDLLDPNTQARKE EEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHH ALERHHLFPRKYLARQKITEQRDVNQVANYALVEWHDNIDISDQPPTVYAPQYEKQFSPA HHHHHCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCEEECCCHHCCCCHH ELKEMYRFHALPEQWYTMDYFTFLEQRRQLMADIIRQGFMHLSQR HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA