| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527163
Identifier: 222527163
GI number: 222527163
Start: 4897376
End: 4898221
Strand: Direct
Name: 222527163
Synonym: Chy400_3945
Alternate gene names: NA
Gene position: 4897376-4898221 (Clockwise)
Preceding gene: 222527162
Following gene: 222527165
Centisome position: 92.95
GC content: 64.42
Gene sequence:
>846_bases ATGCGAGAGATTATTAAGTTCAGAGTGGAGATTAGCAAGGAAGAGGCGACCCATCGACCGCAGTGGGAACGCGAGGTGCT GCAAATCCTGGAGCCTTTGGGCTTTATTGCTATTGAGCGATGGCCCAATCCGCGTGTGCTCACGTTCCAGTTCGACCATT ATCCTGCCCAGTTGGACGAGGTCTGGCAACACCTGCAAGCCCGCGGCTTCTACGGCTCGGTCTGGGAACGGCGGGAATAC ACCCCCACCGAACTCCTCGACGCCGCCTTCCTCAGGCTTGGCACGGAGGCCGTGGTCAGTTCCGTCGACGGCACCCTCCG CTGGGACTGGGTCACCATCTGTCCCCATTGCGGCTTCGCCGAGGAGCGCTGGGACTGGCAACACCTCCAGATCAGCGACC TGCCCACCGGCCCGCACCTGGCGGCGGTCGATTGGCACCCCCTGGTTGTCAGTGCACCGCTGGCGGAGGCGCTGCAGCAG GCAGACGTCACCGGCCTCTCCCTCATCCCGGTGGGTCCAGAGCGGCCCGCCGGGTGGTATGCGCTGCAGCCAACCCACCT CTTGCCTCCGCTGCTGGTGCCACCGACCCGGATGCGCCGGCTACCCACGGCAACCCCGCACTGCGCCCGCGACCACCACT GGGAATCTCCCACATCGGAGCTCTATTATCGACAGGACGGCTTTGCTGCCGCCGACGTCAATGCCTCGTATGAGGTGTTC GGGGATGGCGGCAGGGCCACAGGGCGCATCGTCATCATCTCAAACCGGGTCTACCGCCTGCTGCTGGCGATGGGGGTCAC GCAGCTTGTTGGCTGTGAACCGATCCGGGTTGTGGCCTCAGCGTGA
Upstream 100 bases:
>100_bases GGTTCGAGGATTGGGCGCAACTCATTTGGGAAGTCTACTTCAAACCACTCGGGCTACCCTACCAGTAGGCCAACCACCAG TTGGAAGAGGAGGACCCTCA
Downstream 100 bases:
>100_bases GCGGGTCGCGCTGGGGTGAGGGCGGACAAGGCAACGAGGGATCCCGGCGCCGCCACCGGTACGACGACCGCCTGACGGCC ATCGGCCAGGCCACGGTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MREIIKFRVEISKEEATHRPQWEREVLQILEPLGFIAIERWPNPRVLTFQFDHYPAQLDEVWQHLQARGFYGSVWERREY TPTELLDAAFLRLGTEAVVSSVDGTLRWDWVTICPHCGFAEERWDWQHLQISDLPTGPHLAAVDWHPLVVSAPLAEALQQ ADVTGLSLIPVGPERPAGWYALQPTHLLPPLLVPPTRMRRLPTATPHCARDHHWESPTSELYYRQDGFAAADVNASYEVF GDGGRATGRIVIISNRVYRLLLAMGVTQLVGCEPIRVVASA
Sequences:
>Translated_281_residues MREIIKFRVEISKEEATHRPQWEREVLQILEPLGFIAIERWPNPRVLTFQFDHYPAQLDEVWQHLQARGFYGSVWERREY TPTELLDAAFLRLGTEAVVSSVDGTLRWDWVTICPHCGFAEERWDWQHLQISDLPTGPHLAAVDWHPLVVSAPLAEALQQ ADVTGLSLIPVGPERPAGWYALQPTHLLPPLLVPPTRMRRLPTATPHCARDHHWESPTSELYYRQDGFAAADVNASYEVF GDGGRATGRIVIISNRVYRLLLAMGVTQLVGCEPIRVVASA >Mature_281_residues MREIIKFRVEISKEEATHRPQWEREVLQILEPLGFIAIERWPNPRVLTFQFDHYPAQLDEVWQHLQARGFYGSVWERREY TPTELLDAAFLRLGTEAVVSSVDGTLRWDWVTICPHCGFAEERWDWQHLQISDLPTGPHLAAVDWHPLVVSAPLAEALQQ ADVTGLSLIPVGPERPAGWYALQPTHLLPPLLVPPTRMRRLPTATPHCARDHHWESPTSELYYRQDGFAAADVNASYEVF GDGGRATGRIVIISNRVYRLLLAMGVTQLVGCEPIRVVASA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31936; Mature: 31936
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREIIKFRVEISKEEATHRPQWEREVLQILEPLGFIAIERWPNPRVLTFQFDHYPAQLDE CCCCEEEEEEECHHHCCCCCHHHHHHHHHHHHHCEEEEEECCCCCEEEEEECCCCHHHHH VWQHLQARGFYGSVWERREYTPTELLDAAFLRLGTEAVVSSVDGTLRWDWVTICPHCGFA HHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHCHHHHHHHCCCCEEEEEEEECCCCCCH EERWDWQHLQISDLPTGPHLAAVDWHPLVVSAPLAEALQQADVTGLSLIPVGPERPAGWY HHCCCCCEEEEECCCCCCCEEEECCCCEEEECHHHHHHHHCCCCCEEEEECCCCCCCCEE ALQPTHLLPPLLVPPTRMRRLPTATPHCARDHHWESPTSELYYRQDGFAAADVNASYEVF EECCHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHEEEECCCCEEEECCCCEEEE GDGGRATGRIVIISNRVYRLLLAMGVTQLVGCEPIRVVASA ECCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCEEEEECC >Mature Secondary Structure MREIIKFRVEISKEEATHRPQWEREVLQILEPLGFIAIERWPNPRVLTFQFDHYPAQLDE CCCCEEEEEEECHHHCCCCCHHHHHHHHHHHHHCEEEEEECCCCCEEEEEECCCCHHHHH VWQHLQARGFYGSVWERREYTPTELLDAAFLRLGTEAVVSSVDGTLRWDWVTICPHCGFA HHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHCHHHHHHHCCCCEEEEEEEECCCCCCH EERWDWQHLQISDLPTGPHLAAVDWHPLVVSAPLAEALQQADVTGLSLIPVGPERPAGWY HHCCCCCEEEEECCCCCCCEEEECCCCEEEECHHHHHHHHCCCCCEEEEECCCCCCCCEE ALQPTHLLPPLLVPPTRMRRLPTATPHCARDHHWESPTSELYYRQDGFAAADVNASYEVF EECCHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHEEEECCCCEEEECCCCEEEE GDGGRATGRIVIISNRVYRLLLAMGVTQLVGCEPIRVVASA ECCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA