Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222527127

Identifier: 222527127

GI number: 222527127

Start: 4859563

End: 4860066

Strand: Direct

Name: 222527127

Synonym: Chy400_3908

Alternate gene names: NA

Gene position: 4859563-4860066 (Clockwise)

Preceding gene: 222527124

Following gene: 222527130

Centisome position: 92.23

GC content: 60.71

Gene sequence:

>504_bases
ATGTTACCGTGTTATATCAAATCTTCGTTCATCAGTCCCGTGATAGCGGTTGCCCCGCTCCGGGGGGAATCACCGCTTAT
GCTCTTCCATCACCTGTACCAGTGTTACGGGATACGAAAGGAGGCTGATGGGCAGGCTGGAAGCCTGCTTCACGATCCAC
GCCACTGCTCACGCACAGCCAGATCATCACGGATGGTCAAATCAGGTGGGTGTGAACTGCACGCACCTCGTCCCTCCGCA
CCAGATCGCGAGCACGGCTGGCGCAGCAGCGTGGCTGCCGCACTCCAAACGATGCGTCACGGCAATACGGGGGGGGGAAG
CGGTACTCCCCTGGAGCAGATACAACCTCGACCCGCAGCGGTAGCGTTACACCACGCACCGGATCGCGAGCACGGCTGGC
GCAGCAGCGTGGCTGCCGCACTCCAGACGATGCGTCACGGCAATCCGGGCGGGAAGCGGTACCAGGATGATGGTGCGATC
ACAAGCAATGACGTCTCGTACTGA

Upstream 100 bases:

>100_bases
CAGATACGGATCCATGCCCGGAAATGGTGGTTCCATAGATTGCTCCTGGGTAGTGGTGTAGATATTATAGCATGGACGGC
ATCTTGTCAGCGGCTGAACC

Downstream 100 bases:

>100_bases
TATACCACCACTCGTGCCACCTGCAAGCAGCACTGAAACAACAACCTCAGCGCTCGAAGATGTCTAAAAACAATCTTGTA
GACGAACGTTCAATCAGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MLPCYIKSSFISPVIAVAPLRGESPLMLFHHLYQCYGIRKEADGQAGSLLHDPRHCSRTARSSRMVKSGGCELHAPRPSA
PDREHGWRSSVAAALQTMRHGNTGGGSGTPLEQIQPRPAAVALHHAPDREHGWRSSVAAALQTMRHGNPGGKRYQDDGAI
TSNDVSY

Sequences:

>Translated_167_residues
MLPCYIKSSFISPVIAVAPLRGESPLMLFHHLYQCYGIRKEADGQAGSLLHDPRHCSRTARSSRMVKSGGCELHAPRPSA
PDREHGWRSSVAAALQTMRHGNTGGGSGTPLEQIQPRPAAVALHHAPDREHGWRSSVAAALQTMRHGNPGGKRYQDDGAI
TSNDVSY
>Mature_167_residues
MLPCYIKSSFISPVIAVAPLRGESPLMLFHHLYQCYGIRKEADGQAGSLLHDPRHCSRTARSSRMVKSGGCELHAPRPSA
PDREHGWRSSVAAALQTMRHGNTGGGSGTPLEQIQPRPAAVALHHAPDREHGWRSSVAAALQTMRHGNPGGKRYQDDGAI
TSNDVSY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18083; Mature: 18083

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPCYIKSSFISPVIAVAPLRGESPLMLFHHLYQCYGIRKEADGQAGSLLHDPRHCSRTA
CCCCCHHHHHHCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH
RSSRMVKSGGCELHAPRPSAPDREHGWRSSVAAALQTMRHGNTGGGSGTPLEQIQPRPAA
HHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCE
VALHHAPDREHGWRSSVAAALQTMRHGNPGGKRYQDDGAITSNDVSY
EEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLPCYIKSSFISPVIAVAPLRGESPLMLFHHLYQCYGIRKEADGQAGSLLHDPRHCSRTA
CCCCCHHHHHHCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH
RSSRMVKSGGCELHAPRPSAPDREHGWRSSVAAALQTMRHGNTGGGSGTPLEQIQPRPAA
HHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCE
VALHHAPDREHGWRSSVAAALQTMRHGNPGGKRYQDDGAITSNDVSY
EEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA