| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527122
Identifier: 222527122
GI number: 222527122
Start: 4852426
End: 4853643
Strand: Direct
Name: 222527122
Synonym: Chy400_3903
Alternate gene names: NA
Gene position: 4852426-4853643 (Clockwise)
Preceding gene: 222527121
Following gene: 222527124
Centisome position: 92.09
GC content: 43.92
Gene sequence:
>1218_bases ATGACAACACCGACGTTTGATGAGCATCTTCACTCGCTTTGGCAAGGATTTTTCTCAACGTATAGCTCACTCTCCATCTT TGCCAGTAAGATCGGTGAGCGTGCTGATCAGTTCGACGAGGAGCGTATCCAGCAAATGGCAAGTGATCTGGCCTTCGCTC TCGGTGAATGTAGAGAGGTAGTACTGGCAGGATTGCGCAACTACCTTACCTCTTGGAAAGACAAAGATACCTTACCCGAT GTCCGTAACAATGATGAATTTCATGATGTCATAAAACATATTAACGATCCATCATTCAAACAACTTTTGTCTGATTGGGA GCAAAAAGAACCACAGAAGAGTGATGTGTTAATGGAAATACTGAGAGAACTCTTTATTCGTCCACCTATCAGTGCTGTCT ATTTGCGGCAAAGCTGTCTGATTGCGCTGGTTAGTGCTGTTGAGGATTTTATCAATAATTTGCTGTACGCTTATGGCGTA TACAAAGATAAGGATAACTGGAAGCAGCGCTGGAACAAACTTGATAAAGTTATCACAGAGTGTTTTGCGTCTGATCCTTG GACATCATTGCCCGACAACGAGGCTACGGATTTGAGGGAGAAATATAAGCGTTGGCAGGAAGGGTACACGGAAATTATCC AGCGTCGCAATATACTTGTCCATAACGGTGGCAGAGTTGACGAGCATTATTTAGACCAAGCACCGAAAGCACATCAACCA CCAGGAATTACGGCAGGACAGATAGTCCTTGTTTCTCCTTCCTACCTGCAAAAAGCATTCGACCTGTCACTTACATTACT CTTCACACTTACGCAGTTGGTGTGGCGAAAAGGACTTGCTATAGGCCAAACGAACCAAAACGCCGATAAGATGGCGTCTG ATTTGATATACGAACTCTTACGCCAAAAACAATATGCACTGGTCATTGAACTTGCAGAACTTGCAATCAAATTCCACCTC GACCAGAGTGAACGTATGCTCGTTCTGGTGAATAAAGGTGTTGCACTACGCAAGTATGGACGGAAGCAGGAACTCAAATC CATTATTAGCCAGTTACGCCGGAGTGACGCATGGCTTTTTCAGATGGCTGCATATATCTTGAACGGAGAGAATGATGCAG CCAGGCGTATTATGATTAATAATAGTCCTAATCTACGACGACAAGCGAAACTCTCATGGCCTTTGTTCGATTTTATTCGT GAAAAAACCGTGGTTTAG
Upstream 100 bases:
>100_bases GGTGCAGGAGTGAGGCTAATGAGGTCGGGAAGAGGAAGGAATAACGCATTCATACGCTGTAACGTTTTAGCAGATGTGCC TGACTGCGACTGGAGCATAT
Downstream 100 bases:
>100_bases TTCTCTCTTCGGGTCAGTCAATAAGGCTGTACTATCGCCTGAATGACTGGAGCCTATTTCAAAAAACGTCTGCCAGGAGT TAGCCCATTCTTGAACGACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MTTPTFDEHLHSLWQGFFSTYSSLSIFASKIGERADQFDEERIQQMASDLAFALGECREVVLAGLRNYLTSWKDKDTLPD VRNNDEFHDVIKHINDPSFKQLLSDWEQKEPQKSDVLMEILRELFIRPPISAVYLRQSCLIALVSAVEDFINNLLYAYGV YKDKDNWKQRWNKLDKVITECFASDPWTSLPDNEATDLREKYKRWQEGYTEIIQRRNILVHNGGRVDEHYLDQAPKAHQP PGITAGQIVLVSPSYLQKAFDLSLTLLFTLTQLVWRKGLAIGQTNQNADKMASDLIYELLRQKQYALVIELAELAIKFHL DQSERMLVLVNKGVALRKYGRKQELKSIISQLRRSDAWLFQMAAYILNGENDAARRIMINNSPNLRRQAKLSWPLFDFIR EKTVV
Sequences:
>Translated_405_residues MTTPTFDEHLHSLWQGFFSTYSSLSIFASKIGERADQFDEERIQQMASDLAFALGECREVVLAGLRNYLTSWKDKDTLPD VRNNDEFHDVIKHINDPSFKQLLSDWEQKEPQKSDVLMEILRELFIRPPISAVYLRQSCLIALVSAVEDFINNLLYAYGV YKDKDNWKQRWNKLDKVITECFASDPWTSLPDNEATDLREKYKRWQEGYTEIIQRRNILVHNGGRVDEHYLDQAPKAHQP PGITAGQIVLVSPSYLQKAFDLSLTLLFTLTQLVWRKGLAIGQTNQNADKMASDLIYELLRQKQYALVIELAELAIKFHL DQSERMLVLVNKGVALRKYGRKQELKSIISQLRRSDAWLFQMAAYILNGENDAARRIMINNSPNLRRQAKLSWPLFDFIR EKTVV >Mature_404_residues TTPTFDEHLHSLWQGFFSTYSSLSIFASKIGERADQFDEERIQQMASDLAFALGECREVVLAGLRNYLTSWKDKDTLPDV RNNDEFHDVIKHINDPSFKQLLSDWEQKEPQKSDVLMEILRELFIRPPISAVYLRQSCLIALVSAVEDFINNLLYAYGVY KDKDNWKQRWNKLDKVITECFASDPWTSLPDNEATDLREKYKRWQEGYTEIIQRRNILVHNGGRVDEHYLDQAPKAHQPP GITAGQIVLVSPSYLQKAFDLSLTLLFTLTQLVWRKGLAIGQTNQNADKMASDLIYELLRQKQYALVIELAELAIKFHLD QSERMLVLVNKGVALRKYGRKQELKSIISQLRRSDAWLFQMAAYILNGENDAARRIMINNSPNLRRQAKLSWPLFDFIRE KTVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47047; Mature: 46916
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPTFDEHLHSLWQGFFSTYSSLSIFASKIGERADQFDEERIQQMASDLAFALGECREV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLAGLRNYLTSWKDKDTLPDVRNNDEFHDVIKHINDPSFKQLLSDWEQKEPQKSDVLMEI HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHH LRELFIRPPISAVYLRQSCLIALVSAVEDFINNLLYAYGVYKDKDNWKQRWNKLDKVITE HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH CFASDPWTSLPDNEATDLREKYKRWQEGYTEIIQRRNILVHNGGRVDEHYLDQAPKAHQP HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHCCCCCCCC PGITAGQIVLVSPSYLQKAFDLSLTLLFTLTQLVWRKGLAIGQTNQNADKMASDLIYELL CCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH RQKQYALVIELAELAIKFHLDQSERMLVLVNKGVALRKYGRKQELKSIISQLRRSDAWLF HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHH QMAAYILNGENDAARRIMINNSPNLRRQAKLSWPLFDFIREKTVV HHHHHHHCCCCHHHCEEEECCCCCCHHHHHCCCHHHHHHHHHCCC >Mature Secondary Structure TTPTFDEHLHSLWQGFFSTYSSLSIFASKIGERADQFDEERIQQMASDLAFALGECREV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLAGLRNYLTSWKDKDTLPDVRNNDEFHDVIKHINDPSFKQLLSDWEQKEPQKSDVLMEI HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHH LRELFIRPPISAVYLRQSCLIALVSAVEDFINNLLYAYGVYKDKDNWKQRWNKLDKVITE HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH CFASDPWTSLPDNEATDLREKYKRWQEGYTEIIQRRNILVHNGGRVDEHYLDQAPKAHQP HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHCCCCCCCC PGITAGQIVLVSPSYLQKAFDLSLTLLFTLTQLVWRKGLAIGQTNQNADKMASDLIYELL CCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH RQKQYALVIELAELAIKFHLDQSERMLVLVNKGVALRKYGRKQELKSIISQLRRSDAWLF HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHH QMAAYILNGENDAARRIMINNSPNLRRQAKLSWPLFDFIREKTVV HHHHHHHCCCCHHHCEEEECCCCCCHHHHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA