| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527115
Identifier: 222527115
GI number: 222527115
Start: 4845472
End: 4846389
Strand: Direct
Name: 222527115
Synonym: Chy400_3896
Alternate gene names: NA
Gene position: 4845472-4846389 (Clockwise)
Preceding gene: 222527114
Following gene: 222527117
Centisome position: 91.96
GC content: 56.1
Gene sequence:
>918_bases ATGACTACTCGTACCATGTTTGTGAATCTGCTGGCGGCGGAATGGATCAAAATTTCACGCCGACCGATGGCACTGCTGTT GTTAGGTATCTTTCTGCTGCTGACTGCGCTGCAACAGACCCTCTGGTTTCTGGTTGTGGCTCTGCAAGAAGGCGTGTTCA GTGGTGGGCAGGTCACCTTTAGCCTGCTCAGTGACGCAGCGATTGCACAGATCAAACTCCAGCTCAGTCTGCCCGGTGTG TTCGGCGCGATGCTGAGTGCGATTAACGGTACCGGTGGCATCCTGGCGATTATCCTCACCGCCGGGATTTTTGGGAGCGA TTTTAACTGGGGAACGCTGCGTATTCTGTTGACGCGAGCGCCGCATCGAGGTGCCTATTTGCTGGCTAAACTGGTAGCGT TGCAACTGGCATTGCTGGTCGCCATTCTTATCACGCTTGTCCTCGGCACCCTGCTGGCACTGCTCTTCGGTGCGGTACTT GGTTTGCCACAACGCATCGGGTTCTTAGAGGTGCTTCTCTTGCCGGTTGGTATCTTGCGGGCATTAGTGGTGATGTTGCC CTACACCCTGATTGCCGGCGCCAGCGCTATCTTTGGCCGCTCGGTGATCGCCGGCGTCGGTGGCGGTTTGATCTTTCTCG CTTTTGATGTGAGTGCCGGTTCGCTCAACACCATCGGCGCGGTCGATCCGCTTATTCGCACGCTGGTCAATCTCTTGCTC CAGCCTAATATCAACCGACTGGTCGTCGAGAATAGTCGAATGTTCGGCCTCGATCAAAGTGTGCTGACCTCGGCCCTCGA CCTCAGTCTGCTGCCATCGCAGTGGCAGGCGCTGATCATTGTCGCAGTCTACAGTGCTATCTTTGGCTACAGCGCCTACC GCACGCTCTCCCGGCAGGATATTGGTGGTGCGAACTAA
Upstream 100 bases:
>100_bases TGCCCGGACTCAGACAGGGGTTCATCTGTCAGAGAAATTTCACAACGTTACCGACAGGTAGTGACGGGATGAAGATAGAT ACAGCATTGGGTCATCGCTT
Downstream 100 bases:
>100_bases AAATATTTTATGTCAACCTATTCGTAGACCTACTTCACGCAGGCTATCAGGCTTACCGACAATGGTTAGCTCGTCGCCGT GGCGTAGCCGGGTGTAGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MTTRTMFVNLLAAEWIKISRRPMALLLLGIFLLLTALQQTLWFLVVALQEGVFSGGQVTFSLLSDAAIAQIKLQLSLPGV FGAMLSAINGTGGILAIILTAGIFGSDFNWGTLRILLTRAPHRGAYLLAKLVALQLALLVAILITLVLGTLLALLFGAVL GLPQRIGFLEVLLLPVGILRALVVMLPYTLIAGASAIFGRSVIAGVGGGLIFLAFDVSAGSLNTIGAVDPLIRTLVNLLL QPNINRLVVENSRMFGLDQSVLTSALDLSLLPSQWQALIIVAVYSAIFGYSAYRTLSRQDIGGAN
Sequences:
>Translated_305_residues MTTRTMFVNLLAAEWIKISRRPMALLLLGIFLLLTALQQTLWFLVVALQEGVFSGGQVTFSLLSDAAIAQIKLQLSLPGV FGAMLSAINGTGGILAIILTAGIFGSDFNWGTLRILLTRAPHRGAYLLAKLVALQLALLVAILITLVLGTLLALLFGAVL GLPQRIGFLEVLLLPVGILRALVVMLPYTLIAGASAIFGRSVIAGVGGGLIFLAFDVSAGSLNTIGAVDPLIRTLVNLLL QPNINRLVVENSRMFGLDQSVLTSALDLSLLPSQWQALIIVAVYSAIFGYSAYRTLSRQDIGGAN >Mature_304_residues TTRTMFVNLLAAEWIKISRRPMALLLLGIFLLLTALQQTLWFLVVALQEGVFSGGQVTFSLLSDAAIAQIKLQLSLPGVF GAMLSAINGTGGILAIILTAGIFGSDFNWGTLRILLTRAPHRGAYLLAKLVALQLALLVAILITLVLGTLLALLFGAVLG LPQRIGFLEVLLLPVGILRALVVMLPYTLIAGASAIFGRSVIAGVGGGLIFLAFDVSAGSLNTIGAVDPLIRTLVNLLLQ PNINRLVVENSRMFGLDQSVLTSALDLSLLPSQWQALIIVAVYSAIFGYSAYRTLSRQDIGGAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32349; Mature: 32218
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRTMFVNLLAAEWIKISRRPMALLLLGIFLLLTALQQTLWFLVVALQEGVFSGGQVTF CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH SLLSDAAIAQIKLQLSLPGVFGAMLSAINGTGGILAIILTAGIFGSDFNWGTLRILLTRA HHHHHHHHHHEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECC PHRGAYLLAKLVALQLALLVAILITLVLGTLLALLFGAVLGLPQRIGFLEVLLLPVGILR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH ALVVMLPYTLIAGASAIFGRSVIAGVGGGLIFLAFDVSAGSLNTIGAVDPLIRTLVNLLL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHH QPNINRLVVENSRMFGLDQSVLTSALDLSLLPSQWQALIIVAVYSAIFGYSAYRTLSRQD CCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC IGGAN CCCCC >Mature Secondary Structure TTRTMFVNLLAAEWIKISRRPMALLLLGIFLLLTALQQTLWFLVVALQEGVFSGGQVTF CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH SLLSDAAIAQIKLQLSLPGVFGAMLSAINGTGGILAIILTAGIFGSDFNWGTLRILLTRA HHHHHHHHHHEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECC PHRGAYLLAKLVALQLALLVAILITLVLGTLLALLFGAVLGLPQRIGFLEVLLLPVGILR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH ALVVMLPYTLIAGASAIFGRSVIAGVGGGLIFLAFDVSAGSLNTIGAVDPLIRTLVNLLL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHH QPNINRLVVENSRMFGLDQSVLTSALDLSLLPSQWQALIIVAVYSAIFGYSAYRTLSRQD CCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC IGGAN CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA