| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is corA [H]
Identifier: 222527038
GI number: 222527038
Start: 4754315
End: 4755280
Strand: Reverse
Name: corA [H]
Synonym: Chy400_3817
Alternate gene names: 222527038
Gene position: 4755280-4754315 (Counterclockwise)
Preceding gene: 222527039
Following gene: 222527037
Centisome position: 90.25
GC content: 51.86
Gene sequence:
>966_bases ATGGTAACACTGCACACCTTTCAACGTCAACAGGTGCAACAGCTCACCGATTTCGATCAGATCAGCGAACTCCTTCTCCA ACCACGCACCATGATCTGGCTCGATCTTGAACAACCGACAGACGCAGAGATTGCCCTGTTGCGCGAAGAGTTCGGTTTTC ATCCGCTCGCGATTGAAGATGCGCTACAGATGCACGAACGACCGAAGATTGAAACCTACCCCGGTTACTACCTGATCATC TTCTACAGCGTTGAATACGATGCGAAGCAGCGAACATTACAGTTTCTGCCGGTGGCGCTCTTTGTCGGGGCAAATTATCT GGTCAGTATCCGCAGCGGCCCGGTGCGCCATGTGCAAGAGACGCTGGCGCGCTGGCAGAGTAATGGCTATATGCCGGGCT ATCAGGTGAGCAGTATCCTCTACGCGCTGATTGATGCGATTGTTGACGATTACTTCGTCGCGCTGGATGCCCTCGGTGAA CAGATTGATGACATCGAAGACGAGATTTTTCAACGCGGTCGCCACGAAGTAGCCAGTGACATCTTCACCCTGAAGAAAGA CCTTCTGTTGCTACGGCGCATTGTCGCACCTGAGCGTGACATTCTGAATGTCCTATTGCGCCAGGAAGTGCGTATCTTCC ACCCCCGTGAGTTAACCTACGTTCGCGATGTCTACGATCATCTGGTGCGGATCACCGAGTCGATTGATCTCTACCGCGAC CTGCTCTCAAGTGCGCTGGATAGCTATCTTTCACTGCAAGGCAATCAACTCAATCAGTTGGTAAAGGTCTTAACCCTCTG GTCGATTATTTTGATGTCCTGTTCACTGGTTGCCGGTATCTACGGGATGAACTTTGCGCTCATGCCCGAACTCGAACAGC CGTGGGGGTATCCGTTTGCACTTGGTTTGATGCTAACTATTGCCGTTGGACTGGCAATTTACTTTAAACGGAGGCGCTGG TGGTAG
Upstream 100 bases:
>100_bases TCAAGCGATCATTCTCGCAAATACAAACGTTCATCTCGCTGTTCACTGTGCATTTTTCGGGGATGCGAAAATCTCTTTAT CTAGGAAAGACCACAAATCG
Downstream 100 bases:
>100_bases ATATACCACTACTGCTAATCGACGGTGTGCCACCGTCTGCCGCCATTATCATCGAACACCAGATAGTAGAATGGTCGTGT TCTGTACCGGTCAATGCGAC
Product: magnesium and cobalt transport protein CorA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MVTLHTFQRQQVQQLTDFDQISELLLQPRTMIWLDLEQPTDAEIALLREEFGFHPLAIEDALQMHERPKIETYPGYYLII FYSVEYDAKQRTLQFLPVALFVGANYLVSIRSGPVRHVQETLARWQSNGYMPGYQVSSILYALIDAIVDDYFVALDALGE QIDDIEDEIFQRGRHEVASDIFTLKKDLLLLRRIVAPERDILNVLLRQEVRIFHPRELTYVRDVYDHLVRITESIDLYRD LLSSALDSYLSLQGNQLNQLVKVLTLWSIILMSCSLVAGIYGMNFALMPELEQPWGYPFALGLMLTIAVGLAIYFKRRRW W
Sequences:
>Translated_321_residues MVTLHTFQRQQVQQLTDFDQISELLLQPRTMIWLDLEQPTDAEIALLREEFGFHPLAIEDALQMHERPKIETYPGYYLII FYSVEYDAKQRTLQFLPVALFVGANYLVSIRSGPVRHVQETLARWQSNGYMPGYQVSSILYALIDAIVDDYFVALDALGE QIDDIEDEIFQRGRHEVASDIFTLKKDLLLLRRIVAPERDILNVLLRQEVRIFHPRELTYVRDVYDHLVRITESIDLYRD LLSSALDSYLSLQGNQLNQLVKVLTLWSIILMSCSLVAGIYGMNFALMPELEQPWGYPFALGLMLTIAVGLAIYFKRRRW W >Mature_321_residues MVTLHTFQRQQVQQLTDFDQISELLLQPRTMIWLDLEQPTDAEIALLREEFGFHPLAIEDALQMHERPKIETYPGYYLII FYSVEYDAKQRTLQFLPVALFVGANYLVSIRSGPVRHVQETLARWQSNGYMPGYQVSSILYALIDAIVDDYFVALDALGE QIDDIEDEIFQRGRHEVASDIFTLKKDLLLLRRIVAPERDILNVLLRQEVRIFHPRELTYVRDVYDHLVRITESIDLYRD LLSSALDSYLSLQGNQLNQLVKVLTLWSIILMSCSLVAGIYGMNFALMPELEQPWGYPFALGLMLTIAVGLAIYFKRRRW W
Specific function: Mediates influx of magnesium ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
Organism=Escherichia coli, GI1787604, Length=269, Percent_Identity=20.4460966542751, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI2367297, Length=308, Percent_Identity=24.025974025974, Blast_Score=67, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6324442, Length=317, Percent_Identity=23.3438485804416, Blast_Score=82, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6321058, Length=343, Percent_Identity=23.3236151603499, Blast_Score=80, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004488 - InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 37408; Mature: 37408
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTLHTFQRQQVQQLTDFDQISELLLQPRTMIWLDLEQPTDAEIALLREEFGFHPLAIED CCEEHHHHHHHHHHHHCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCCHHHH ALQMHERPKIETYPGYYLIIFYSVEYDAKQRTLQFLPVALFVGANYLVSIRSGPVRHVQE HHHHHCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCHHEEEECCCCHHHHHH TLARWQSNGYMPGYQVSSILYALIDAIVDDYFVALDALGEQIDDIEDEIFQRGRHEVASD HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFTLKKDLLLLRRIVAPERDILNVLLRQEVRIFHPRELTYVRDVYDHLVRITESIDLYRD HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LLSSALDSYLSLQGNQLNQLVKVLTLWSIILMSCSLVAGIYGMNFALMPELEQPWGYPFA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCHHH LGLMLTIAVGLAIYFKRRRWW HHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVTLHTFQRQQVQQLTDFDQISELLLQPRTMIWLDLEQPTDAEIALLREEFGFHPLAIED CCEEHHHHHHHHHHHHCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCCHHHH ALQMHERPKIETYPGYYLIIFYSVEYDAKQRTLQFLPVALFVGANYLVSIRSGPVRHVQE HHHHHCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCHHEEEECCCCHHHHHH TLARWQSNGYMPGYQVSSILYALIDAIVDDYFVALDALGEQIDDIEDEIFQRGRHEVASD HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFTLKKDLLLLRRIVAPERDILNVLLRQEVRIFHPRELTYVRDVYDHLVRITESIDLYRD HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LLSSALDSYLSLQGNQLNQLVKVLTLWSIILMSCSLVAGIYGMNFALMPELEQPWGYPFA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCHHH LGLMLTIAVGLAIYFKRRRWW HHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]