| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526944
Identifier: 222526944
GI number: 222526944
Start: 4640754
End: 4641578
Strand: Reverse
Name: 222526944
Synonym: Chy400_3722
Alternate gene names: NA
Gene position: 4641578-4640754 (Counterclockwise)
Preceding gene: 222526946
Following gene: 222526943
Centisome position: 88.09
GC content: 65.7
Gene sequence:
>825_bases TTGCTGGGCAGTGACCCCGATGCCTACGGTGCAGCACTGTGCCAGGCGCTGTTTGCCGACCCGCAGGCGGTTGCCAAATA CTGTGAGTTGCGGGCGGCAGCGCTGAATCGGAACAACAGCCGCGCCGTGTCGGTGCAGCTCATTGTGCCCGCTGCGTTAC AGGGGTTGCGCTGGGAGTTGCTGCGCGACCCGGTGAGCGGGCAGCCGGTTGGGTGCGATGCTAACGTCTGGTGGTCGCGC TTGTTGCCGGTTGACCACACGATACCACTCCCACCTGCCCCGACCAGTGTCCGGCGGGTGTTGCTGGCAGTGGCCGACCC GGTTGATGTGGCGACCTATCGCCTGCCAGGGATTGACGCGGAATACACCGACCTGCTCCGCAGGGCACTGGCCGATTGGG AGACGTCAGTGATCAGCGCACATTGGGATGAGGTGCGGTACCAGTTGTACGCCGGCTACGATGTGCTGGTGCTGGTGGCC CACGGGACGCTGGTTGAGGGGCAGCCCTGGCTGTTCCTGGTCGACGAGCAGCAGCGGGTGGCACGGCGATCCGGTGCCGA TCTGGTGGCGATGCTCAAGAGTCTTGGTGAGCGTTGCCCACGGCTGGTGGCGTTGATCAGTTGTGCCGGTGCCGGCGACG ATGACCGACAGCCGTTGACGGCGCTGGGGCCGCTGTTGGCCCGCAGCGGCCCACCGGCAGTGATTGCCGCGTATGGTAAT CTCTCACTGGCGACGGCTAAGCGCAGTACGGTCAGATTGACCGTGCCCTCAACGCCGCCCGCCTGGCCGCCCGCAATGAT GACCGCTCCGACTGGTGGGCATTGA
Upstream 100 bases:
>100_bases GTGTTACGAGCTGCGGTTGTAACTGGAGAGCGATGACCAACGTCATCGTCCACCTCAGACCTTCCCCTGTGGGCCGCTCG ATGCCGATGCGCTGCGTGCC
Downstream 100 bases:
>100_bases CCCTGTTCAGCCGGTTGCGCAACAGCCGGCTCTGGGTGTCTGCGCCGGCCCACCAGCCCGACAGCGCACCGTTTATGGTA GCCTACCAGCGCAACCGACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MLGSDPDAYGAALCQALFADPQAVAKYCELRAAALNRNNSRAVSVQLIVPAALQGLRWELLRDPVSGQPVGCDANVWWSR LLPVDHTIPLPPAPTSVRRVLLAVADPVDVATYRLPGIDAEYTDLLRRALADWETSVISAHWDEVRYQLYAGYDVLVLVA HGTLVEGQPWLFLVDEQQRVARRSGADLVAMLKSLGERCPRLVALISCAGAGDDDRQPLTALGPLLARSGPPAVIAAYGN LSLATAKRSTVRLTVPSTPPAWPPAMMTAPTGGH
Sequences:
>Translated_274_residues MLGSDPDAYGAALCQALFADPQAVAKYCELRAAALNRNNSRAVSVQLIVPAALQGLRWELLRDPVSGQPVGCDANVWWSR LLPVDHTIPLPPAPTSVRRVLLAVADPVDVATYRLPGIDAEYTDLLRRALADWETSVISAHWDEVRYQLYAGYDVLVLVA HGTLVEGQPWLFLVDEQQRVARRSGADLVAMLKSLGERCPRLVALISCAGAGDDDRQPLTALGPLLARSGPPAVIAAYGN LSLATAKRSTVRLTVPSTPPAWPPAMMTAPTGGH >Mature_274_residues MLGSDPDAYGAALCQALFADPQAVAKYCELRAAALNRNNSRAVSVQLIVPAALQGLRWELLRDPVSGQPVGCDANVWWSR LLPVDHTIPLPPAPTSVRRVLLAVADPVDVATYRLPGIDAEYTDLLRRALADWETSVISAHWDEVRYQLYAGYDVLVLVA HGTLVEGQPWLFLVDEQQRVARRSGADLVAMLKSLGERCPRLVALISCAGAGDDDRQPLTALGPLLARSGPPAVIAAYGN LSLATAKRSTVRLTVPSTPPAWPPAMMTAPTGGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29396; Mature: 29396
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGSDPDAYGAALCQALFADPQAVAKYCELRAAALNRNNSRAVSVQLIVPAALQGLRWEL CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHHHHHHH LRDPVSGQPVGCDANVWWSRLLPVDHTIPLPPAPTSVRRVLLAVADPVDVATYRLPGIDA HHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHEEECCCCCH EYTDLLRRALADWETSVISAHWDEVRYQLYAGYDVLVLVAHGTLVEGQPWLFLVDEQQRV HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEEECCCEECCCCEEEEECCHHHH ARRSGADLVAMLKSLGERCPRLVALISCAGAGDDDRQPLTALGPLLARSGPPAVIAAYGN HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECC LSLATAKRSTVRLTVPSTPPAWPPAMMTAPTGGH EEEEEECCCEEEEEECCCCCCCCCCEECCCCCCC >Mature Secondary Structure MLGSDPDAYGAALCQALFADPQAVAKYCELRAAALNRNNSRAVSVQLIVPAALQGLRWEL CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHHHHHHH LRDPVSGQPVGCDANVWWSRLLPVDHTIPLPPAPTSVRRVLLAVADPVDVATYRLPGIDA HHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHEEECCCCCH EYTDLLRRALADWETSVISAHWDEVRYQLYAGYDVLVLVAHGTLVEGQPWLFLVDEQQRV HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEEECCCEECCCCEEEEECCHHHH ARRSGADLVAMLKSLGERCPRLVALISCAGAGDDDRQPLTALGPLLARSGPPAVIAAYGN HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECC LSLATAKRSTVRLTVPSTPPAWPPAMMTAPTGGH EEEEEECCCEEEEEECCCCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA