| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222526503
Identifier: 222526503
GI number: 222526503
Start: 4077151
End: 4078212
Strand: Reverse
Name: 222526503
Synonym: Chy400_3270
Alternate gene names: NA
Gene position: 4078212-4077151 (Counterclockwise)
Preceding gene: 222526504
Following gene: 222526502
Centisome position: 77.4
GC content: 55.27
Gene sequence:
>1062_bases ATGAGCAGGTTCGGAGCACTGTTACCGGCCTGTCAGCCACTCTTGCGCGGTGGTCTCCCTCACCAGAGCCTGGCGCAGGC TGCACAATTGATCTGTCGCTATCAACCGCAAACGCCGGCATGGCCACTCCCGCCTCCCCGGACACTGGCCGATACCCCAT TCGCTCTGGCAGCGCAGGGCTTGCCGGGCATTCAGATTGATATTGAGCGTGACCGTTTGATGGTCGATCAGGCTATCCTG GAGCAGGAAGCAACAAAGGTGAGTCTGGCATACCTGCGCGGCGATACACAGCCGGCTGCCCTGACCGGTTCGGCCTACAC CGCGTTGGAAGAGATCTTGCGTCGATTGAACGCAGAAGACCGCCAACCCCTACTGTTGAAATATGAGACCATTGGCCCGG TGAGCCTGAGTCTGGCTTTAACCGATGATCACGAGCGACCACTGGCTTACGATCCGGGATGGCGCGAGATCATTCTCCAA TTCTGTAGCCTGCGCGTCATCTGGCAACACGAACAAGTCCAGGGCTATGCAGATCATCGTCTGGCAATGATTGAGGAGCC ATTCCTTGATGCGCTCTCCACACCGTTATGTCCATTGACCTGGGAGGATGGCCTCGACATGCTTAACCGCTTTCTGGCCG ACTTACCTTCCTGGCGTGGCATCTTTCTGAGCGGTCACGTGCGTTGGTCAGAGATACTGCATTTGCCGGTTGATGTCATC GGTCTGCATGTAACAGAGCAGCTCGACTCATTATTGAAAGCTACGTCGGCGCTCACCGAATTCCTGACCGATGGTGGCTG TCTGGCCTGGGGCATTATTCCAACTGAACATCGGCAGATCGACACCGCAACGGCAACCGATTTGCGCGATCAGGTGTTAA AGGGAATGCAGCAGGTGGCAGAGACAACCGGTGTCGCCTTGCACATTGTGCAGCAACAATCATTTCTCTCATTTACCGGT AGCTTGAGCTATATGAGTCCAGCCTATGCTGAGCAGGCGTTGCAGCTTTGTAGCGAAACAGCGCACTTGATGCAGCAGGC AATAAGTGTTAGCAATCAATAA
Upstream 100 bases:
>100_bases TTGATGTGACACCAAACGAATTGGTGACAGCGATTATTACGGAACGGGGCATCGTGCGACCGCCATATCTGGCCGCATTG CGTCAGCTTGAGAGTGGGCG
Downstream 100 bases:
>100_bases AATATCGAAATTCCGCCTGGTGCGGGCTGAGCATGAGGAGCAGACGCTGTGAAAATTGTAGTCACCGGTTCCCTGGCCTT TGATTACATTATGGACTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MSRFGALLPACQPLLRGGLPHQSLAQAAQLICRYQPQTPAWPLPPPRTLADTPFALAAQGLPGIQIDIERDRLMVDQAIL EQEATKVSLAYLRGDTQPAALTGSAYTALEEILRRLNAEDRQPLLLKYETIGPVSLSLALTDDHERPLAYDPGWREIILQ FCSLRVIWQHEQVQGYADHRLAMIEEPFLDALSTPLCPLTWEDGLDMLNRFLADLPSWRGIFLSGHVRWSEILHLPVDVI GLHVTEQLDSLLKATSALTEFLTDGGCLAWGIIPTEHRQIDTATATDLRDQVLKGMQQVAETTGVALHIVQQQSFLSFTG SLSYMSPAYAEQALQLCSETAHLMQQAISVSNQ
Sequences:
>Translated_353_residues MSRFGALLPACQPLLRGGLPHQSLAQAAQLICRYQPQTPAWPLPPPRTLADTPFALAAQGLPGIQIDIERDRLMVDQAIL EQEATKVSLAYLRGDTQPAALTGSAYTALEEILRRLNAEDRQPLLLKYETIGPVSLSLALTDDHERPLAYDPGWREIILQ FCSLRVIWQHEQVQGYADHRLAMIEEPFLDALSTPLCPLTWEDGLDMLNRFLADLPSWRGIFLSGHVRWSEILHLPVDVI GLHVTEQLDSLLKATSALTEFLTDGGCLAWGIIPTEHRQIDTATATDLRDQVLKGMQQVAETTGVALHIVQQQSFLSFTG SLSYMSPAYAEQALQLCSETAHLMQQAISVSNQ >Mature_352_residues SRFGALLPACQPLLRGGLPHQSLAQAAQLICRYQPQTPAWPLPPPRTLADTPFALAAQGLPGIQIDIERDRLMVDQAILE QEATKVSLAYLRGDTQPAALTGSAYTALEEILRRLNAEDRQPLLLKYETIGPVSLSLALTDDHERPLAYDPGWREIILQF CSLRVIWQHEQVQGYADHRLAMIEEPFLDALSTPLCPLTWEDGLDMLNRFLADLPSWRGIFLSGHVRWSEILHLPVDVIG LHVTEQLDSLLKATSALTEFLTDGGCLAWGIIPTEHRQIDTATATDLRDQVLKGMQQVAETTGVALHIVQQQSFLSFTGS LSYMSPAYAEQALQLCSETAHLMQQAISVSNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39132; Mature: 39001
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRFGALLPACQPLLRGGLPHQSLAQAAQLICRYQPQTPAWPLPPPRTLADTPFALAAQG CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCC LPGIQIDIERDRLMVDQAILEQEATKVSLAYLRGDTQPAALTGSAYTALEEILRRLNAED CCCEEEEECHHHHHHHHHHHHHHHHHEEEHHHCCCCCCCEECCHHHHHHHHHHHHCCCCC RQPLLLKYETIGPVSLSLALTDDHERPLAYDPGWREIILQFCSLRVIWQHEQVQGYADHR CCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHEEEHHHHCCHHHHH LAMIEEPFLDALSTPLCPLTWEDGLDMLNRFLADLPSWRGIFLSGHVRWSEILHLPVDVI HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHCCHHHH GLHVTEQLDSLLKATSALTEFLTDGGCLAWGIIPTEHRQIDTATATDLRDQVLKGMQQVA HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH ETTGVALHIVQQQSFLSFTGSLSYMSPAYAEQALQLCSETAHLMQQAISVSNQ HHCCCEEEEEHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SRFGALLPACQPLLRGGLPHQSLAQAAQLICRYQPQTPAWPLPPPRTLADTPFALAAQG CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCC LPGIQIDIERDRLMVDQAILEQEATKVSLAYLRGDTQPAALTGSAYTALEEILRRLNAED CCCEEEEECHHHHHHHHHHHHHHHHHEEEHHHCCCCCCCEECCHHHHHHHHHHHHCCCCC RQPLLLKYETIGPVSLSLALTDDHERPLAYDPGWREIILQFCSLRVIWQHEQVQGYADHR CCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHEEEHHHHCCHHHHH LAMIEEPFLDALSTPLCPLTWEDGLDMLNRFLADLPSWRGIFLSGHVRWSEILHLPVDVI HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHCCHHHH GLHVTEQLDSLLKATSALTEFLTDGGCLAWGIIPTEHRQIDTATATDLRDQVLKGMQQVA HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH ETTGVALHIVQQQSFLSFTGSLSYMSPAYAEQALQLCSETAHLMQQAISVSNQ HHCCCEEEEEHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA