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The map label for this gene is ygjR [C]

Identifier: 222526501

GI number: 222526501

Start: 4075091

End: 4076131

Strand: Reverse

Name: ygjR [C]

Synonym: Chy400_3268

Alternate gene names: 222526501

Gene position: 4076131-4075091 (Counterclockwise)

Preceding gene: 222526502

Following gene: 222526500

Centisome position: 77.36

GC content: 58.6

Gene sequence:

>1041_bases
ATGAAGTGGGGGATATTGAGTGCAGGTCGGATTGCCCGTCGCTTTGCTTCCGCTGTGGCAGTATCAGCGACCGAGCAGGT
TGTTGCCGTTGCAGCCCGTGATGCCGAACGTGCGACCGCCTTCGCCGGCGAATTTGGGATCGCTCGCGCCTATAGCGACT
ATGAAGCCTTGCTGAACGATCCCGACGTTGAGGCGGTGTACAATGCGCTGCCCAACAGCCTGCATGCACGCTGGTCGATT
GCGGCGTTGCAGGCCGGCAAACACGTGCTGTGTGAAAAGCCGCTGGCGACGACCCTGGCCGATGGCCTGGCGATGGCTGC
CGCAGCGCAGGCGCACCGACGTTTGTTGATGGAAGCCTTTATGTACCGCTTCCATCCGCAAACCATCACCGTTCAACGCT
TACTGGCTGATGGCGTTATCGGTGATGTGAAACAGGTGAGAGGCAATTTTGCCTTTTTGCTCGATGATACGACAAACATC
CGGCTCAACCCTGAATTGGGCGGCGGTGCGCTGTACGACATCGGATGCTACCCGCTGAGCTATGCCCGTATGGCTTTTGG
CAGTGCGCCCCAAAAAGCCAGTGCCTTTGTTACCGGCGAACCGGTTGATCTGAGTCTGAGCGGCCTGCTCTGGTTTGCTG
AAGATCGGGTGGCCACCATTACTTGCAGCTTTCAGAGTGCATGGAATCAGCGCATCGAAATCATCGGCAGCGCAGGATGG
ATTCATCTTGAACGACCGTTCAATCCGACACCTGATCTGGCAACCACAATCGCGATTGCCCGCGGTGGTCGTCACGTGAC
GGTAGAGACAGTGACGATCCCGGCTGCCGATCACTTTCGGCTCGAAGCCGAGGGCTTTGCTGCGCTGGCAAGCGGTGGCG
CTCCGGTACCGGCAATCGGGGCAATGCCGTTGACCGAGTCGCTCGACAACCTGGCTGCAATGGAGGCACTCTTTCGTAGT
GCTGCTACTGCCACACATACTGTTGTCCACCAGCCGACACTCACACCGGAATGGCCGGTCGGCACGTCGCCTGGTTATTA
G

Upstream 100 bases:

>100_bases
GCCAGGAACATCGCTTTACCCCCACCCAATTCGCGCAGCGTTATCGAGAGGCATTTGGTCACGATCTGCCGCACGACCTC
TTTTCACTACGGGAGGCAGC

Downstream 100 bases:

>100_bases
TAAAGGAGAGTCTACCAGCTATGACCGTAAGCTACGACATCAAAGATATCAATCTGGCCGAGCAAGGCCGCAAGCGCATT
GAGTGGGCCGAAAAAGAGAT

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MKWGILSAGRIARRFASAVAVSATEQVVAVAARDAERATAFAGEFGIARAYSDYEALLNDPDVEAVYNALPNSLHARWSI
AALQAGKHVLCEKPLATTLADGLAMAAAAQAHRRLLMEAFMYRFHPQTITVQRLLADGVIGDVKQVRGNFAFLLDDTTNI
RLNPELGGGALYDIGCYPLSYARMAFGSAPQKASAFVTGEPVDLSLSGLLWFAEDRVATITCSFQSAWNQRIEIIGSAGW
IHLERPFNPTPDLATTIAIARGGRHVTVETVTIPAADHFRLEAEGFAALASGGAPVPAIGAMPLTESLDNLAAMEALFRS
AATATHTVVHQPTLTPEWPVGTSPGY

Sequences:

>Translated_346_residues
MKWGILSAGRIARRFASAVAVSATEQVVAVAARDAERATAFAGEFGIARAYSDYEALLNDPDVEAVYNALPNSLHARWSI
AALQAGKHVLCEKPLATTLADGLAMAAAAQAHRRLLMEAFMYRFHPQTITVQRLLADGVIGDVKQVRGNFAFLLDDTTNI
RLNPELGGGALYDIGCYPLSYARMAFGSAPQKASAFVTGEPVDLSLSGLLWFAEDRVATITCSFQSAWNQRIEIIGSAGW
IHLERPFNPTPDLATTIAIARGGRHVTVETVTIPAADHFRLEAEGFAALASGGAPVPAIGAMPLTESLDNLAAMEALFRS
AATATHTVVHQPTLTPEWPVGTSPGY
>Mature_346_residues
MKWGILSAGRIARRFASAVAVSATEQVVAVAARDAERATAFAGEFGIARAYSDYEALLNDPDVEAVYNALPNSLHARWSI
AALQAGKHVLCEKPLATTLADGLAMAAAAQAHRRLLMEAFMYRFHPQTITVQRLLADGVIGDVKQVRGNFAFLLDDTTNI
RLNPELGGGALYDIGCYPLSYARMAFGSAPQKASAFVTGEPVDLSLSGLLWFAEDRVATITCSFQSAWNQRIEIIGSAGW
IHLERPFNPTPDLATTIAIARGGRHVTVETVTIPAADHFRLEAEGFAALASGGAPVPAIGAMPLTESLDNLAAMEALFRS
AATATHTVVHQPTLTPEWPVGTSPGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=253, Percent_Identity=34.7826086956522, Blast_Score=132, Evalue=6e-31,
Organism=Escherichia coli, GI145693182, Length=321, Percent_Identity=28.3489096573209, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1787574, Length=195, Percent_Identity=29.7435897435897, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI87081947, Length=188, Percent_Identity=27.6595744680851, Blast_Score=71, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24581117, Length=254, Percent_Identity=35.4330708661417, Blast_Score=148, Evalue=6e-36,
Organism=Drosophila melanogaster, GI24581115, Length=250, Percent_Identity=33.6, Blast_Score=107, Evalue=9e-24,
Organism=Drosophila melanogaster, GI24584727, Length=254, Percent_Identity=29.1338582677165, Blast_Score=93, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36887; Mature: 36887

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWGILSAGRIARRFASAVAVSATEQVVAVAARDAERATAFAGEFGIARAYSDYEALLND
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHCC
PDVEAVYNALPNSLHARWSIAALQAGKHVLCEKPLATTLADGLAMAAAAQAHRRLLMEAF
CCHHHHHHHCCCCHHHHEEEEHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MYRFHPQTITVQRLLADGVIGDVKQVRGNFAFLLDDTTNIRLNPELGGGALYDIGCYPLS
HHHHCCCHHHHHHHHHCCHHHHHHHHCCCEEEEEECCCEEEECCCCCCCEEEEECCCCHH
YARMAFGSAPQKASAFVTGEPVDLSLSGLLWFAEDRVATITCSFQSAWNQRIEIIGSAGW
HHHHHHCCCCCCCCEEECCCCCEEEECEEEEEECCCEEEEEEEHHHHCCCEEEEEECCCE
IHLERPFNPTPDLATTIAIARGGRHVTVETVTIPAADHFRLEAEGFAALASGGAPVPAIG
EEEECCCCCCCCHHHHHHEECCCCEEEEEEEEECCCCCEEEECCCCEEEECCCCCCCCCC
AMPLTESLDNLAAMEALFRSAATATHTVVHQPTLTPEWPVGTSPGY
CCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKWGILSAGRIARRFASAVAVSATEQVVAVAARDAERATAFAGEFGIARAYSDYEALLND
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHCC
PDVEAVYNALPNSLHARWSIAALQAGKHVLCEKPLATTLADGLAMAAAAQAHRRLLMEAF
CCHHHHHHHCCCCHHHHEEEEHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MYRFHPQTITVQRLLADGVIGDVKQVRGNFAFLLDDTTNIRLNPELGGGALYDIGCYPLS
HHHHCCCHHHHHHHHHCCHHHHHHHHCCCEEEEEECCCEEEECCCCCCCEEEEECCCCHH
YARMAFGSAPQKASAFVTGEPVDLSLSGLLWFAEDRVATITCSFQSAWNQRIEIIGSAGW
HHHHHHCCCCCCCCEEECCCCCEEEECEEEEEECCCEEEEEEEHHHHCCCEEEEEECCCE
IHLERPFNPTPDLATTIAIARGGRHVTVETVTIPAADHFRLEAEGFAALASGGAPVPAIG
EEEECCCCCCCCHHHHHHEECCCCEEEEEEEEECCCCCEEEECCCCEEEECCCCCCCCCC
AMPLTESLDNLAAMEALFRSAATATHTVVHQPTLTPEWPVGTSPGY
CCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7845353 [H]