| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is metK
Identifier: 222526499
GI number: 222526499
Start: 4072435
End: 4073646
Strand: Reverse
Name: metK
Synonym: Chy400_3266
Alternate gene names: 222526499
Gene position: 4073646-4072435 (Counterclockwise)
Preceding gene: 222526500
Following gene: 222526498
Centisome position: 77.31
GC content: 58.42
Gene sequence:
>1212_bases ATGGCAAACACATTTATGAACTCGCCTCGCTTCTACTTCACCAGTGAGAGTGTCAGCGAGGGCCATCCCGACAAAATGTG TGATCAGATCAGCGACGCAATTCTCGATGCGTTCCTGAGTCACGACCCGAAGGCACGGGTGGCAGTGGAAACGGCGACAA CCACCGGTCTGATCGTGGTGCTGGGTGAAGTAACTTACGAACGCGGCTACATTCCGATTGAAGAGATCGTCCGCCGCACG GTGAAAGAGATTGGCTATACCAGCGCCGAATATGGCTTCGACGCCGACACCTGTGGCGTGATGGTCGCCATTCACGGTCA ATCGCCCGATATTGCGATGGGTGTTGATAAAGCGCTTGAAGCCAAGATCGGCGCTATGGCCGATGACGTGGAAGCGGTTG GGGCCGGCGATCAAGGGATGATGTTCGGCTTCGCCTGTGATGAGACGCCGGAACTGATGCCGGCCAGCATCGCCCTGGCC CATCGCCTGATCCGTCGGCTGGAGCGGGTACGCAAAGATGGCACACTACCCTATCTGCGTCCCGACGCCAAATCGCAAGT GACGGTTGAGTACAGCTTTGGCAAACCGGTGCGGGTTGATACTGTGCTGATCAGCAGCCAGCATGCACCGGACATCACTC AGGATCAAATCCGCGCCGATTTGATCGAGCACGTCATCAAGACAGAAATTCCCGAAGCATGGCTGGATAGCCAGACCAAA ATTTTCATCAATCCAACCGGTCGCTTCGTGATCGGTGGGCCAATGGGTGACAGCGGCCTCACCGGGCGCAAGATCATTGT GGACACTTACGGTGGCGTTGCCCGCCATGGTGGTGGTGCCTTCAGCGGCAAAGACCCCTCAAAAGTTGATCGCAGTGCTG CCTACGCCTGCCGCTGGGTTGCGAAGAACATTGTCGCCGCTGGACTGGCCCGTCGGGTCGAACTGCAAGTGAGCTACGCT ATCGGCGTCGCCCGCCCGCTCTCGCTCAGCGTCGAAACCTTCGGTACCGCTGCCGTTCCCGATGAAGTCATCCTCAAAGC GGTGAATGAGGTCTTTGATCTGCGGCCAGGTGCGATTATCCGCGATCTTGATCTGCGGCGTCCGATCTACCGCAAGACGG CGGCTGGTGGACATTTCGGGCGGACTGACATCGATCTGCCATGGGAGCGCACGAATCGGGTGGAAGAGCTGCGCCGCGCT GCCGGCTTGTAG
Upstream 100 bases:
>100_bases GCAACCATCATTGCCTCGTTGCAGCCTTCCATTAACAAGTGACGTACAGCGCAGTAGGGCGCTGAAGAAATAAGCTCCAG AACGACAACAGAGGTTACCT
Downstream 100 bases:
>100_bases GCTTCTACCCCACCCGGCAGGATGTTTCGGGTAGTTCCTGAAGAGGATGATGTAAACCGGAACGTACCGGCACGCCGAAA GGTGTGATGTATCTGTCAAT
Product: S-adenosylmethionine synthetase
Products: NA
Alternate protein names: AdoMet synthase; MAT; Methionine adenosyltransferase
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MANTFMNSPRFYFTSESVSEGHPDKMCDQISDAILDAFLSHDPKARVAVETATTTGLIVVLGEVTYERGYIPIEEIVRRT VKEIGYTSAEYGFDADTCGVMVAIHGQSPDIAMGVDKALEAKIGAMADDVEAVGAGDQGMMFGFACDETPELMPASIALA HRLIRRLERVRKDGTLPYLRPDAKSQVTVEYSFGKPVRVDTVLISSQHAPDITQDQIRADLIEHVIKTEIPEAWLDSQTK IFINPTGRFVIGGPMGDSGLTGRKIIVDTYGGVARHGGGAFSGKDPSKVDRSAAYACRWVAKNIVAAGLARRVELQVSYA IGVARPLSLSVETFGTAAVPDEVILKAVNEVFDLRPGAIIRDLDLRRPIYRKTAAGGHFGRTDIDLPWERTNRVEELRRA AGL
Sequences:
>Translated_403_residues MANTFMNSPRFYFTSESVSEGHPDKMCDQISDAILDAFLSHDPKARVAVETATTTGLIVVLGEVTYERGYIPIEEIVRRT VKEIGYTSAEYGFDADTCGVMVAIHGQSPDIAMGVDKALEAKIGAMADDVEAVGAGDQGMMFGFACDETPELMPASIALA HRLIRRLERVRKDGTLPYLRPDAKSQVTVEYSFGKPVRVDTVLISSQHAPDITQDQIRADLIEHVIKTEIPEAWLDSQTK IFINPTGRFVIGGPMGDSGLTGRKIIVDTYGGVARHGGGAFSGKDPSKVDRSAAYACRWVAKNIVAAGLARRVELQVSYA IGVARPLSLSVETFGTAAVPDEVILKAVNEVFDLRPGAIIRDLDLRRPIYRKTAAGGHFGRTDIDLPWERTNRVEELRRA AGL >Mature_402_residues ANTFMNSPRFYFTSESVSEGHPDKMCDQISDAILDAFLSHDPKARVAVETATTTGLIVVLGEVTYERGYIPIEEIVRRTV KEIGYTSAEYGFDADTCGVMVAIHGQSPDIAMGVDKALEAKIGAMADDVEAVGAGDQGMMFGFACDETPELMPASIALAH RLIRRLERVRKDGTLPYLRPDAKSQVTVEYSFGKPVRVDTVLISSQHAPDITQDQIRADLIEHVIKTEIPEAWLDSQTKI FINPTGRFVIGGPMGDSGLTGRKIIVDTYGGVARHGGGAFSGKDPSKVDRSAAYACRWVAKNIVAAGLARRVELQVSYAI GVARPLSLSVETFGTAAVPDEVILKAVNEVFDLRPGAIIRDLDLRRPIYRKTAAGGHFGRTDIDLPWERTNRVEELRRAA GL
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the e
COG id: COG0192
COG function: function code H; S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase family
Homologues:
Organism=Homo sapiens, GI5174529, Length=395, Percent_Identity=54.6835443037975, Blast_Score=417, Evalue=1e-116, Organism=Homo sapiens, GI4557737, Length=383, Percent_Identity=56.1357702349869, Blast_Score=413, Evalue=1e-115, Organism=Escherichia coli, GI1789311, Length=394, Percent_Identity=62.4365482233503, Blast_Score=484, Evalue=1e-138, Organism=Caenorhabditis elegans, GI17538494, Length=405, Percent_Identity=55.5555555555556, Blast_Score=436, Evalue=1e-122, Organism=Caenorhabditis elegans, GI17538498, Length=394, Percent_Identity=56.3451776649746, Blast_Score=434, Evalue=1e-122, Organism=Caenorhabditis elegans, GI25145633, Length=394, Percent_Identity=56.0913705583756, Blast_Score=432, Evalue=1e-121, Organism=Caenorhabditis elegans, GI17551082, Length=387, Percent_Identity=55.0387596899225, Blast_Score=428, Evalue=1e-120, Organism=Caenorhabditis elegans, GI32565905, Length=405, Percent_Identity=51.6049382716049, Blast_Score=382, Evalue=1e-106, Organism=Caenorhabditis elegans, GI32565911, Length=343, Percent_Identity=53.935860058309, Blast_Score=357, Evalue=8e-99, Organism=Caenorhabditis elegans, GI25145635, Length=343, Percent_Identity=53.6443148688047, Blast_Score=353, Evalue=6e-98, Organism=Caenorhabditis elegans, GI32565903, Length=326, Percent_Identity=54.9079754601227, Blast_Score=336, Evalue=1e-92, Organism=Caenorhabditis elegans, GI32565909, Length=88, Percent_Identity=54.5454545454545, Blast_Score=105, Evalue=4e-23, Organism=Caenorhabditis elegans, GI32565907, Length=43, Percent_Identity=74.4186046511628, Blast_Score=75, Evalue=9e-14, Organism=Saccharomyces cerevisiae, GI6323209, Length=394, Percent_Identity=56.8527918781726, Blast_Score=425, Evalue=1e-120, Organism=Saccharomyces cerevisiae, GI6320710, Length=395, Percent_Identity=55.4430379746835, Blast_Score=419, Evalue=1e-118, Organism=Drosophila melanogaster, GI45552159, Length=389, Percent_Identity=51.9280205655527, Blast_Score=384, Evalue=1e-107, Organism=Drosophila melanogaster, GI24580529, Length=389, Percent_Identity=51.9280205655527, Blast_Score=384, Evalue=1e-107, Organism=Drosophila melanogaster, GI24580537, Length=389, Percent_Identity=51.9280205655527, Blast_Score=384, Evalue=1e-107, Organism=Drosophila melanogaster, GI24580533, Length=389, Percent_Identity=51.9280205655527, Blast_Score=384, Evalue=1e-107, Organism=Drosophila melanogaster, GI24580535, Length=389, Percent_Identity=51.9280205655527, Blast_Score=384, Evalue=1e-107, Organism=Drosophila melanogaster, GI24580531, Length=389, Percent_Identity=51.9280205655527, Blast_Score=384, Evalue=1e-107, Organism=Drosophila melanogaster, GI24580527, Length=389, Percent_Identity=52.4421593830334, Blast_Score=384, Evalue=1e-107, Organism=Drosophila melanogaster, GI24580525, Length=389, Percent_Identity=52.4421593830334, Blast_Score=384, Evalue=1e-107, Organism=Drosophila melanogaster, GI24580541, Length=376, Percent_Identity=51.3297872340426, Blast_Score=360, Evalue=1e-100, Organism=Drosophila melanogaster, GI24580539, Length=128, Percent_Identity=53.125, Blast_Score=129, Evalue=3e-30,
Paralogues:
None
Copy number: 7,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): METK_CHLAA (A9WGQ3)
Other databases:
- EMBL: CP000909 - RefSeq: YP_001636608.1 - ProteinModelPortal: A9WGQ3 - SMR: A9WGQ3 - GeneID: 5827494 - GenomeReviews: CP000909_GR - KEGG: cau:Caur_3020 - HOGENOM: HBG443662 - OMA: IYYAHRL - ProtClustDB: PRK05250 - GO: GO:0005737 - HAMAP: MF_00086 - InterPro: IPR022631 - InterPro: IPR022630 - InterPro: IPR022629 - InterPro: IPR022628 - InterPro: IPR002133 - InterPro: IPR022636 - PANTHER: PTHR11964 - PIRSF: PIRSF000497 - TIGRFAMs: TIGR01034
Pfam domain/function: PF02773 S-AdoMet_synt_C; PF02772 S-AdoMet_synt_M; PF00438 S-AdoMet_synt_N; SSF55973 S-AdoMet_synt
EC number: =2.5.1.6
Molecular weight: Translated: 43881; Mature: 43749
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: PS00376 ADOMET_SYNTHASE_1; PS00377 ADOMET_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANTFMNSPRFYFTSESVSEGHPDKMCDQISDAILDAFLSHDPKARVAVETATTTGLIVV CCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEE LGEVTYERGYIPIEEIVRRTVKEIGYTSAEYGFDADTCGVMVAIHGQSPDIAMGVDKALE EEEHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCEECCHHHHHH AKIGAMADDVEAVGAGDQGMMFGFACDETPELMPASIALAHRLIRRLERVRKDGTLPYLR HHHCCHHHCHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC PDAKSQVTVEYSFGKPVRVDTVLISSQHAPDITQDQIRADLIEHVIKTEIPEAWLDSQTK CCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCE IFINPTGRFVIGGPMGDSGLTGRKIIVDTYGGVARHGGGAFSGKDPSKVDRSAAYACRWV EEECCCCCEEEECCCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHH AKNIVAAGLARRVELQVSYAIGVARPLSLSVETFGTAAVPDEVILKAVNEVFDLRPGAII HHHHHHHHHHHEEEEEEEEEECCCCCCEEEHHHCCCCCCCHHHHHHHHHHHHHCCCCCEE RDLDLRRPIYRKTAAGGHFGRTDIDLPWERTNRVEELRRAAGL ECCHHCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure ANTFMNSPRFYFTSESVSEGHPDKMCDQISDAILDAFLSHDPKARVAVETATTTGLIVV CCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEE LGEVTYERGYIPIEEIVRRTVKEIGYTSAEYGFDADTCGVMVAIHGQSPDIAMGVDKALE EEEHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCEECCHHHHHH AKIGAMADDVEAVGAGDQGMMFGFACDETPELMPASIALAHRLIRRLERVRKDGTLPYLR HHHCCHHHCHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC PDAKSQVTVEYSFGKPVRVDTVLISSQHAPDITQDQIRADLIEHVIKTEIPEAWLDSQTK CCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCE IFINPTGRFVIGGPMGDSGLTGRKIIVDTYGGVARHGGGAFSGKDPSKVDRSAAYACRWV EEECCCCCEEEECCCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHH AKNIVAAGLARRVELQVSYAIGVARPLSLSVETFGTAAVPDEVILKAVNEVFDLRPGAII HHHHHHHHHHHEEEEEEEEEECCCCCCEEEHHHCCCCCCCHHHHHHHHHHHHHCCCCCEE RDLDLRRPIYRKTAAGGHFGRTDIDLPWERTNRVEELRRAAGL ECCHHCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA