| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526468
Identifier: 222526468
GI number: 222526468
Start: 4034147
End: 4035187
Strand: Reverse
Name: 222526468
Synonym: Chy400_3235
Alternate gene names: NA
Gene position: 4035187-4034147 (Counterclockwise)
Preceding gene: 222526469
Following gene: 222526467
Centisome position: 76.58
GC content: 52.35
Gene sequence:
>1041_bases ATGCGGTCTATGCGGCTTTTGTTCGTGATCCTGGCGGTTGCTGTTGCATTAGCAGCGTGTGGAAACAGTGGGACAGCGTC AAATCCAAATTCACCAATCATCTTCGCGTGGTTACCTAACGAGTCGGGTTCAGAGCTGAGAGATGCTCGTGAGGCTATCG GTGCAGTTGTTAGCGAGACGCTTGGCCGCCCGGTAGAACATCGGACAACAACAGACTACCTTATTGCTGTTGAAGCGTTG GCGAACAACACCGCCCATCTCGGCTTCTTCGGTGCCGAAGCCTACGTACAGGCACACGACAAGAACGATAAAGTCATTCC ACTCGTCATTCCAAGCGGCAGTGATGGTCGGTTAGAGACAGCCGTCTACTACAGTTGGCTGGCCGTCATGCGTGGTCAGG AAGGAAACTATCAGGAGAACGGTGTCTTCAAGATTGACAATATCCAGGGCAAGCGCTTCTCCTTTGTGTCGAGCAGTTCG ACATCCGGTTTCCGTGTGCCTTCGGCGGACATCGTGCGATATTTCAGCCAGCAGGATAAGTGGAAGGCACTGACGGCAGA CGATCTGATTGAGGGTGGTAACGGTAAGTTCTTCAGTGAAGTTCTGTTTGGCGGATCACATCAGGGGTCGGCAGTAAATC TGCTGTCAGGCAAAGTTGACGTGGCTGCATTTTGCGATGCCTGTGTTGCCAACTATGTAGAGCTGGTTGAGGGTGAAGCA AATCGACCCGGTGCTGTGTATCGCGTACTCCCTAACGCTGATGAACCGTTCGATAAGTTTCCCGGCGCTGAGTTTGTACT CATTGCATCAACGCCCGTTCTCAACGCTCCCTTCGTCGCTAACAGCAGTATGTTGAGCGCTGATGAGATCAAGCGTCTGC AAGATGCATTGACCTCGGATGCCGTAGCGAATAACCCTAAAATCTTCGCTACGAAGGAGGAGATAGACGCCGGTTTCAAG CCACTTTTCCGCAAGACCAACGCCGAGCGTTTTCTGGTTGTCGATGACGCCTTCTTCAATCCAATTCGCGAGCTGCGCTA A
Upstream 100 bases:
>100_bases GTCTATATATTTATAATCTTTGCATAACATAAGCTGCCTAGACTGCATGAGGCGGTGCAAAGGTATCGCCTGGTTCCCTC TGGTAAGGAGAAATTTCGAT
Downstream 100 bases:
>100_bases TTAACCAGACGTTCGGATTGAAGCCGACGTTATGTCGGCTTCAATCCCACGTCATTCTAAGAGGAGATAAGCATGCCTTT GCTTGAAGCAGACGCTGTAA
Product: phosphonate ABC transporter periplasmic phosphonate-binding protein
Products: NA
Alternate protein names: Phosphonate ABC Transporter
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MRSMRLLFVILAVAVALAACGNSGTASNPNSPIIFAWLPNESGSELRDAREAIGAVVSETLGRPVEHRTTTDYLIAVEAL ANNTAHLGFFGAEAYVQAHDKNDKVIPLVIPSGSDGRLETAVYYSWLAVMRGQEGNYQENGVFKIDNIQGKRFSFVSSSS TSGFRVPSADIVRYFSQQDKWKALTADDLIEGGNGKFFSEVLFGGSHQGSAVNLLSGKVDVAAFCDACVANYVELVEGEA NRPGAVYRVLPNADEPFDKFPGAEFVLIASTPVLNAPFVANSSMLSADEIKRLQDALTSDAVANNPKIFATKEEIDAGFK PLFRKTNAERFLVVDDAFFNPIRELR
Sequences:
>Translated_346_residues MRSMRLLFVILAVAVALAACGNSGTASNPNSPIIFAWLPNESGSELRDAREAIGAVVSETLGRPVEHRTTTDYLIAVEAL ANNTAHLGFFGAEAYVQAHDKNDKVIPLVIPSGSDGRLETAVYYSWLAVMRGQEGNYQENGVFKIDNIQGKRFSFVSSSS TSGFRVPSADIVRYFSQQDKWKALTADDLIEGGNGKFFSEVLFGGSHQGSAVNLLSGKVDVAAFCDACVANYVELVEGEA NRPGAVYRVLPNADEPFDKFPGAEFVLIASTPVLNAPFVANSSMLSADEIKRLQDALTSDAVANNPKIFATKEEIDAGFK PLFRKTNAERFLVVDDAFFNPIRELR >Mature_346_residues MRSMRLLFVILAVAVALAACGNSGTASNPNSPIIFAWLPNESGSELRDAREAIGAVVSETLGRPVEHRTTTDYLIAVEAL ANNTAHLGFFGAEAYVQAHDKNDKVIPLVIPSGSDGRLETAVYYSWLAVMRGQEGNYQENGVFKIDNIQGKRFSFVSSSS TSGFRVPSADIVRYFSQQDKWKALTADDLIEGGNGKFFSEVLFGGSHQGSAVNLLSGKVDVAAFCDACVANYVELVEGEA NRPGAVYRVLPNADEPFDKFPGAEFVLIASTPVLNAPFVANSSMLSADEIKRLQDALTSDAVANNPKIFATKEEIDAGFK PLFRKTNAERFLVVDDAFFNPIRELR
Specific function: Unknown
COG id: COG3221
COG function: function code P; ABC-type phosphate/phosphonate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37503; Mature: 37503
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSMRLLFVILAVAVALAACGNSGTASNPNSPIIFAWLPNESGSELRDAREAIGAVVSET CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH LGRPVEHRTTTDYLIAVEALANNTAHLGFFGAEAYVQAHDKNDKVIPLVIPSGSDGRLET HCCCCCCCCCCHHEEEEEHHHCCCEEEEEECCEEEEEEECCCCCEEEEEEECCCCCCCHH AVYYSWLAVMRGQEGNYQENGVFKIDNIQGKRFSFVSSSSTSGFRVPSADIVRYFSQQDK HHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCC WKALTADDLIEGGNGKFFSEVLFGGSHQGSAVNLLSGKVDVAAFCDACVANYVELVEGEA EEEECHHHHHCCCCCCCHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCC NRPGAVYRVLPNADEPFDKFPGAEFVLIASTPVLNAPFVANSSMLSADEIKRLQDALTSD CCCCEEEEECCCCCCCHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH AVANNPKIFATKEEIDAGFKPLFRKTNAERFLVVDDAFFNPIRELR HHCCCCEEEEEHHHHCCCHHHHHHCCCCCEEEEEEHHHHHHHHHCC >Mature Secondary Structure MRSMRLLFVILAVAVALAACGNSGTASNPNSPIIFAWLPNESGSELRDAREAIGAVVSET CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH LGRPVEHRTTTDYLIAVEALANNTAHLGFFGAEAYVQAHDKNDKVIPLVIPSGSDGRLET HCCCCCCCCCCHHEEEEEHHHCCCEEEEEECCEEEEEEECCCCCEEEEEEECCCCCCCHH AVYYSWLAVMRGQEGNYQENGVFKIDNIQGKRFSFVSSSSTSGFRVPSADIVRYFSQQDK HHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCC WKALTADDLIEGGNGKFFSEVLFGGSHQGSAVNLLSGKVDVAAFCDACVANYVELVEGEA EEEECHHHHHCCCCCCCHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCC NRPGAVYRVLPNADEPFDKFPGAEFVLIASTPVLNAPFVANSSMLSADEIKRLQDALTSD CCCCEEEEECCCCCCCHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH AVANNPKIFATKEEIDAGFKPLFRKTNAERFLVVDDAFFNPIRELR HHCCCCEEEEEHHHHCCCHHHHHHCCCCCEEEEEEHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA