| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526405
Identifier: 222526405
GI number: 222526405
Start: 3933637
End: 3934056
Strand: Reverse
Name: 222526405
Synonym: Chy400_3171
Alternate gene names: NA
Gene position: 3934056-3933637 (Counterclockwise)
Preceding gene: 222526406
Following gene: 222526404
Centisome position: 74.66
GC content: 56.43
Gene sequence:
>420_bases ATGAAACCAATCCACGGCGTCGGCGCCGTTGTGTATCGCATTCAACCCGACGGCACCATCGAGATTTTGCTCATTCGCAA ACGAAAAGGATTCTGGTCATTACCAAAGGGCAAACTCAAGCGCGACGAACCAGCGCTGGAAGCGATTGTGCGCGAAGTGC GCGAAGAGACCCACGTAACTGCTGAGGTGGTTGATATGCTGGGCAGTATTGACTACCTGATCAGCGGGCCACGCGGTCAG CAGCGCAAAATTGTTGATTACTACCTGCTGCGTGCGATTAAGGGACGCGCCCGACCAACGGGCGGTAGTGAGCAGATTGT GGCCGTCGATTGGGTGCCACTTGCCGAAGCTATAGATCGCCTTCAGCGTCCACGTTTACGGGCTATCGTGCGTGCAGCGC AGACCCTGTTCAGCGGCTGA
Upstream 100 bases:
>100_bases CCGAGTTTTCTCCCAAAATGATGTATGATATGGAAATAATTGATGTAGACACATCTACACTATCAAATATGATAATTGGT CAAAAGAGGGTCAACTTGAC
Downstream 100 bases:
>100_bases TCGCCATCACCGCTGCACCGGAAGTGTCAACCCAATTCAGCATCAATGCACAACTGAACGAGGACCATGACGTGCTATAA TCAAGGTACACGACCAAAGG
Product: NUDIX hydrolase
Products: NA
Alternate protein names: MutT/Nudix Family Protein; ADP-Ribose Pyrophosphatase; AP4A Hydrolase; NTP Pyrophosphohydrolase MutT; MutT Family Protein
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MKPIHGVGAVVYRIQPDGTIEILLIRKRKGFWSLPKGKLKRDEPALEAIVREVREETHVTAEVVDMLGSIDYLISGPRGQ QRKIVDYYLLRAIKGRARPTGGSEQIVAVDWVPLAEAIDRLQRPRLRAIVRAAQTLFSG
Sequences:
>Translated_139_residues MKPIHGVGAVVYRIQPDGTIEILLIRKRKGFWSLPKGKLKRDEPALEAIVREVREETHVTAEVVDMLGSIDYLISGPRGQ QRKIVDYYLLRAIKGRARPTGGSEQIVAVDWVPLAEAIDRLQRPRLRAIVRAAQTLFSG >Mature_139_residues MKPIHGVGAVVYRIQPDGTIEILLIRKRKGFWSLPKGKLKRDEPALEAIVREVREETHVTAEVVDMLGSIDYLISGPRGQ QRKIVDYYLLRAIKGRARPTGGSEQIVAVDWVPLAEAIDRLQRPRLRAIVRAAQTLFSG
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15622; Mature: 15622
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPIHGVGAVVYRIQPDGTIEILLIRKRKGFWSLPKGKLKRDEPALEAIVREVREETHVT CCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH AEVVDMLGSIDYLISGPRGQQRKIVDYYLLRAIKGRARPTGGSEQIVAVDWVPLAEAIDR HHHHHHHCCHHHEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHH LQRPRLRAIVRAAQTLFSG HCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MKPIHGVGAVVYRIQPDGTIEILLIRKRKGFWSLPKGKLKRDEPALEAIVREVREETHVT CCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH AEVVDMLGSIDYLISGPRGQQRKIVDYYLLRAIKGRARPTGGSEQIVAVDWVPLAEAIDR HHHHHHHCCHHHEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHH LQRPRLRAIVRAAQTLFSG HCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA