| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526348
Identifier: 222526348
GI number: 222526348
Start: 3851451
End: 3851951
Strand: Direct
Name: 222526348
Synonym: Chy400_3114
Alternate gene names: NA
Gene position: 3851451-3851951 (Clockwise)
Preceding gene: 222526347
Following gene: 222526349
Centisome position: 73.1
GC content: 57.09
Gene sequence:
>501_bases ATGACCGAATCAGAACTGGCCAATGCCACGAATAACCCGTCAACCCTCGATGCCATCGAGCAAATGATTTTACGCATAAG CTGGCTGGCGCAGCGCCAGTTTGTGCAGTTGCTCGATGATGAGCGGTTTAACCTGACATTGACCCAGTTCTACACCCTGC TTCATCTGGCGCAAACGAACGGCGAGTGCAAGATGTCAGATCTGGCCGAAGCGACGCAGCAGTCGGCAGCGGCGCTCACC GGTGTAGTTGATCGTTTGCTTGATAAACAGTTGGTAGAGCGCACACGGCACGAGCGGGATCGTCGTCAGGTGATGGTGCA GGTCACGCCGCGGGGACTAGCCTTGATTGCTGCGATTCGTCAGGCCCGGCGCGAGCAAATCCATGCCGCACTTGGACATC TGCCGGCGGCTGATGCCGAACGCTTGCTCGAACTTCTGGAAGGGGTATTAACCGGGATGTCGCGCGTGCTCGAACGGAGT GAGACAGGACGATTGGCATAA
Upstream 100 bases:
>100_bases CATATCGCCCCCAAAGGTCGTGATCCTCTTTACAAGGATGCTTGCTTCTGATATACTTAACATTGTTAAATATCTACACG CGCTAGGAATAGGGTAACGC
Downstream 100 bases:
>100_bases AGGATGACATTATCGTGGTGAACGATAAGCAGGTTCGCCTGCTTGCGTTCAAGGAGCGTACTTTGTTACGGTTACCGTTT CAATTGATACCGCCACCACA
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Regulatory Protein MarR
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MTESELANATNNPSTLDAIEQMILRISWLAQRQFVQLLDDERFNLTLTQFYTLLHLAQTNGECKMSDLAEATQQSAAALT GVVDRLLDKQLVERTRHERDRRQVMVQVTPRGLALIAAIRQARREQIHAALGHLPAADAERLLELLEGVLTGMSRVLERS ETGRLA
Sequences:
>Translated_166_residues MTESELANATNNPSTLDAIEQMILRISWLAQRQFVQLLDDERFNLTLTQFYTLLHLAQTNGECKMSDLAEATQQSAAALT GVVDRLLDKQLVERTRHERDRRQVMVQVTPRGLALIAAIRQARREQIHAALGHLPAADAERLLELLEGVLTGMSRVLERS ETGRLA >Mature_165_residues TESELANATNNPSTLDAIEQMILRISWLAQRQFVQLLDDERFNLTLTQFYTLLHLAQTNGECKMSDLAEATQQSAAALTG VVDRLLDKQLVERTRHERDRRQVMVQVTPRGLALIAAIRQARREQIHAALGHLPAADAERLLELLEGVLTGMSRVLERSE TGRLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18656; Mature: 18524
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESELANATNNPSTLDAIEQMILRISWLAQRQFVQLLDDERFNLTLTQFYTLLHLAQTN CCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC GECKMSDLAEATQQSAAALTGVVDRLLDKQLVERTRHERDRRQVMVQVTPRGLALIAAIR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH QARREQIHAALGHLPAADAERLLELLEGVLTGMSRVLERSETGRLA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TESELANATNNPSTLDAIEQMILRISWLAQRQFVQLLDDERFNLTLTQFYTLLHLAQTN CCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC GECKMSDLAEATQQSAAALTGVVDRLLDKQLVERTRHERDRRQVMVQVTPRGLALIAAIR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH QARREQIHAALGHLPAADAERLLELLEGVLTGMSRVLERSETGRLA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA