Click here to switch to the map view.

The map label for this gene is 222526326

Identifier: 222526326

GI number: 222526326

Start: 3812915

End: 3814894

Strand: Reverse

Name: 222526326

Synonym: Chy400_3092

Alternate gene names: NA

Gene position: 3814894-3812915 (Counterclockwise)

Preceding gene: 222526330

Following gene: 222526325

Centisome position: 72.4

GC content: 58.84

Gene sequence:

>1980_bases
GTGTTTACGTTTGGACGCGCTCTCTGTACAGAACCGATGATTGCTGCCAGCCGCGAGTGGCTGGTGACGAACGGCATTGG
CGGTTATGCAGCCGGTACCATCGCCGGCACATTAACGCGGAGCTACCACGGGTTGCTGATTGCTGCGCTCGAACCACCGC
TGGGCCGTGTCCTTACGCTTGCTGCTCTCGATACACATGTGTCATATCTGGGCCACCATTTCGATTTGACAACTCACCGT
CGGGTAGGTGAACCGGCGCGTGCCTGTCGCTGGCTCGAACGCTGGTGGCGTGACGGCACGACGCCGGTGTGGGAATATGC
GCTGGCCGATGCCCTGCTTGAACGACGAGTCTGGATGGCGCCAGGTGCCAATACCACCTTCATTCGCTACACTGTGCAAC
GCGCCTCGGCACCACTGACGATACGCCTTGATGCCCTGGCAACAGCACGCGATCATCACACGGTGGCGCAGGTCGGTAAG
ATCGCGCTTCAGGTCGAGACGATCAATAACGGTCTCCGGATCGGGCCAATGATTGGTGGGCATAGTTTACGTCTGCTCAG
TGATCGAGCGTCCTGGAAACCGCTCGGCGGATGGCTGACCGATCTGTACCTCGCAGTGGAAGATGAACGTGGTCAACCGG
CTACCGACAATCTGCGCCGGGTGGGGCGGCTTACAGTGACGTTGAGCACCGGTGAGTCGCTCCTGGTGGTTGCTACCACT
GAACAGACTGCCACACTTGATGCCGATGCAGCCTGGAGCCAACGTGCCCGTTACGAAGCGGAGCTGCTCAGCCGGATCGA
GTGGACTGATGATCCAGTGGTTCACCAGCTTGCGCTGGCTGCCGACCAGTTTATTGTTGACCGACCACTCGACACCGGTC
TGCGCGGACGGACGATTATCGCCGGTTATCCCTGGTTTACCGATTGGGGACGCGATACGATGATCAGCCTGCCCGGGTTA
ACGATCCCGACACGACGACCAGAGGTAGCGGCGGCTGTGCTGCGCACCTTCGCCCGTTTTGTTGATCAAGGTATGCTCCC
CAACCGATTTCCCGATGAAGGCGTCGCCCCTGAGTACAACACTGCCGATGCAACGCTCTGGTTTTTTGAGGCGATTCGTG
CCCATCACGCTGCCTTTGGCGATGATGACCTGATCACCGAACTCTTCCCGCTGTTGGAAGAGATTATCGATTGGCATATC
CGTGGCACCCGTGACGGAATAGGGTTGGATCGCGGTGATAGCTTGCTGCGGGCCGGCACTGCGACAACCCAGCTCACCTG
GATGGATGTACGGGTTCGCGGTTGGGTAGTGACACCGCGTAGTGGCAAGCCGGTTGAGATCAATGCGCTGTGGTACAACG
CCTTGCAAAGTATGGCTGCGTTCGCCAGACATCTCGGTAAAGCCGACGAGCGCTACACGACGATGGCCGCAGCGACCAAA
GCCGGATTTAACCGTTTCTGGTATGCCGATGGCCACTATCTCTACGATGTGATTGATGGCCCCGATGGGGTAGACCCCAC
ACTTCGACCTAATCAGATCATTGCGGTGAGTCTGCCTTACAGTCCGCTTGACCGCCAGCGGCAGGAAGCTGTGGTACAGG
CATGTGCCCGCTCGCTTCTGACCGGCGTTGGTTTGCGCAGTCTGACACCAGATCATCCCGATTATGCACCGCGTTACACC
GGTTCGCTGCTGGCGCGTGACGCCGCCTATCATCAGGGCACGGTTTGGGCCTGGCTGATTGGCCCCTTTGCCAGCGCATG
GTATCGCATTACTCGCGACCGTGACGCCACACGCCGCCTTCTCTTGCCGCTGATCGATCACCTCGTCGATGGCTGTGTTG
GGACGATCAGTGAAATTTTCGACGGCGATCCGCCACACCAGCCACGCGGCTGTTTTGCCCAGGCATGGAGTGTAGCGGAA
GTGCTGCGGGTATGGTATGAGGTAGAAGATAGGGGTGAGGAGATAGAAGATAGGAGATAG

Upstream 100 bases:

>100_bases
CTTTCATCGTTTTCAGGTTCCCTTTTGCGCTGGTATACCTATCGTCACCATCAGGTAGTGTACCATGGAAGAGGAAGCAT
TGTACCCAGGAGTACCTATT

Downstream 100 bases:

>100_bases
AAGATAGGAGATAGAAGATAGGAGATAGAAGATAGGAGATAGAAGATAGGAGATAGAAGATAGGAGATAGAAGATAGGAG
ATAGAAGATAGGAGATAGAA

Product: glycogen debranching protein

Products: NA

Alternate protein names: Amylo-Alpha-16-Glucosidase; Glycogen Debranching Protein; Glycogen Debranching -Related Protein; Glycogen Debranching ; 4-Alpha-Glucanotransferase; Amylo-Alpha-1 6-Glucosidase; Glyen Debranching; Amylo-Alpha-1 6-Glucosidase Family; AmylO-Alpha-16-Glucosidase; Glycogen Debranching Family Protein; Glycogen Debranching /Alpha-Amylase; Glycogen Debranching Archaeal Type; Glycogen Debranching Isoform 1 Related Protein; Amylo-1 6-Glucosidase

Number of amino acids: Translated: 659; Mature: 659

Protein sequence:

>659_residues
MFTFGRALCTEPMIAASREWLVTNGIGGYAAGTIAGTLTRSYHGLLIAALEPPLGRVLTLAALDTHVSYLGHHFDLTTHR
RVGEPARACRWLERWWRDGTTPVWEYALADALLERRVWMAPGANTTFIRYTVQRASAPLTIRLDALATARDHHTVAQVGK
IALQVETINNGLRIGPMIGGHSLRLLSDRASWKPLGGWLTDLYLAVEDERGQPATDNLRRVGRLTVTLSTGESLLVVATT
EQTATLDADAAWSQRARYEAELLSRIEWTDDPVVHQLALAADQFIVDRPLDTGLRGRTIIAGYPWFTDWGRDTMISLPGL
TIPTRRPEVAAAVLRTFARFVDQGMLPNRFPDEGVAPEYNTADATLWFFEAIRAHHAAFGDDDLITELFPLLEEIIDWHI
RGTRDGIGLDRGDSLLRAGTATTQLTWMDVRVRGWVVTPRSGKPVEINALWYNALQSMAAFARHLGKADERYTTMAAATK
AGFNRFWYADGHYLYDVIDGPDGVDPTLRPNQIIAVSLPYSPLDRQRQEAVVQACARSLLTGVGLRSLTPDHPDYAPRYT
GSLLARDAAYHQGTVWAWLIGPFASAWYRITRDRDATRRLLLPLIDHLVDGCVGTISEIFDGDPPHQPRGCFAQAWSVAE
VLRVWYEVEDRGEEIEDRR

Sequences:

>Translated_659_residues
MFTFGRALCTEPMIAASREWLVTNGIGGYAAGTIAGTLTRSYHGLLIAALEPPLGRVLTLAALDTHVSYLGHHFDLTTHR
RVGEPARACRWLERWWRDGTTPVWEYALADALLERRVWMAPGANTTFIRYTVQRASAPLTIRLDALATARDHHTVAQVGK
IALQVETINNGLRIGPMIGGHSLRLLSDRASWKPLGGWLTDLYLAVEDERGQPATDNLRRVGRLTVTLSTGESLLVVATT
EQTATLDADAAWSQRARYEAELLSRIEWTDDPVVHQLALAADQFIVDRPLDTGLRGRTIIAGYPWFTDWGRDTMISLPGL
TIPTRRPEVAAAVLRTFARFVDQGMLPNRFPDEGVAPEYNTADATLWFFEAIRAHHAAFGDDDLITELFPLLEEIIDWHI
RGTRDGIGLDRGDSLLRAGTATTQLTWMDVRVRGWVVTPRSGKPVEINALWYNALQSMAAFARHLGKADERYTTMAAATK
AGFNRFWYADGHYLYDVIDGPDGVDPTLRPNQIIAVSLPYSPLDRQRQEAVVQACARSLLTGVGLRSLTPDHPDYAPRYT
GSLLARDAAYHQGTVWAWLIGPFASAWYRITRDRDATRRLLLPLIDHLVDGCVGTISEIFDGDPPHQPRGCFAQAWSVAE
VLRVWYEVEDRGEEIEDRR
>Mature_659_residues
MFTFGRALCTEPMIAASREWLVTNGIGGYAAGTIAGTLTRSYHGLLIAALEPPLGRVLTLAALDTHVSYLGHHFDLTTHR
RVGEPARACRWLERWWRDGTTPVWEYALADALLERRVWMAPGANTTFIRYTVQRASAPLTIRLDALATARDHHTVAQVGK
IALQVETINNGLRIGPMIGGHSLRLLSDRASWKPLGGWLTDLYLAVEDERGQPATDNLRRVGRLTVTLSTGESLLVVATT
EQTATLDADAAWSQRARYEAELLSRIEWTDDPVVHQLALAADQFIVDRPLDTGLRGRTIIAGYPWFTDWGRDTMISLPGL
TIPTRRPEVAAAVLRTFARFVDQGMLPNRFPDEGVAPEYNTADATLWFFEAIRAHHAAFGDDDLITELFPLLEEIIDWHI
RGTRDGIGLDRGDSLLRAGTATTQLTWMDVRVRGWVVTPRSGKPVEINALWYNALQSMAAFARHLGKADERYTTMAAATK
AGFNRFWYADGHYLYDVIDGPDGVDPTLRPNQIIAVSLPYSPLDRQRQEAVVQACARSLLTGVGLRSLTPDHPDYAPRYT
GSLLARDAAYHQGTVWAWLIGPFASAWYRITRDRDATRRLLLPLIDHLVDGCVGTISEIFDGDPPHQPRGCFAQAWSVAE
VLRVWYEVEDRGEEIEDRR

Specific function: Unknown

COG id: COG3408

COG function: function code G; Glycogen debranching enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17535489, Length=417, Percent_Identity=23.5011990407674, Blast_Score=86, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73575; Mature: 73575

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTFGRALCTEPMIAASREWLVTNGIGGYAAGTIAGTLTRSYHGLLIAALEPPLGRVLTL
CCCCCHHHHCCCHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH
AALDTHVSYLGHHFDLTTHRRVGEPARACRWLERWWRDGTTPVWEYALADALLERRVWMA
HHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEC
PGANTTFIRYTVQRASAPLTIRLDALATARDHHTVAQVGKIALQVETINNGLRIGPMIGG
CCCCCEEEEEEEECCCCCEEEEEEHHHCCCCHHHHHHHHHEEEEEEECCCCEEEECEECC
HSLRLLSDRASWKPLGGWLTDLYLAVEDERGQPATDNLRRVGRLTVTLSTGESLLVVATT
CCEEEECCCCCCCCCCCHHEEEEEEEECCCCCCHHHHHHHCEEEEEEEECCCEEEEEEEC
EQTATLDADAAWSQRARYEAELLSRIEWTDDPVVHQLALAADQFIVDRPLDTGLRGRTII
CCCEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
AGYPWFTDWGRDTMISLPGLTIPTRRPEVAAAVLRTFARFVDQGMLPNRFPDEGVAPEYN
EECCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
TADATLWFFEAIRAHHAAFGDDDLITELFPLLEEIIDWHIRGTRDGIGLDRGDSLLRAGT
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCC
ATTQLTWMDVRVRGWVVTPRSGKPVEINALWYNALQSMAAFARHLGKADERYTTMAAATK
CCEEEEEEEEEEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
AGFNRFWYADGHYLYDVIDGPDGVDPTLRPNQIIAVSLPYSPLDRQRQEAVVQACARSLL
HCCCEEEEECCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH
TGVGLRSLTPDHPDYAPRYTGSLLARDAAYHQGTVWAWLIGPFASAWYRITRDRDATRRL
HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHEEECCCCHHHHHH
LLPLIDHLVDGCVGTISEIFDGDPPHQPRGCFAQAWSVAEVLRVWYEVEDRGEEIEDRR
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MFTFGRALCTEPMIAASREWLVTNGIGGYAAGTIAGTLTRSYHGLLIAALEPPLGRVLTL
CCCCCHHHHCCCHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH
AALDTHVSYLGHHFDLTTHRRVGEPARACRWLERWWRDGTTPVWEYALADALLERRVWMA
HHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEC
PGANTTFIRYTVQRASAPLTIRLDALATARDHHTVAQVGKIALQVETINNGLRIGPMIGG
CCCCCEEEEEEEECCCCCEEEEEEHHHCCCCHHHHHHHHHEEEEEEECCCCEEEECEECC
HSLRLLSDRASWKPLGGWLTDLYLAVEDERGQPATDNLRRVGRLTVTLSTGESLLVVATT
CCEEEECCCCCCCCCCCHHEEEEEEEECCCCCCHHHHHHHCEEEEEEEECCCEEEEEEEC
EQTATLDADAAWSQRARYEAELLSRIEWTDDPVVHQLALAADQFIVDRPLDTGLRGRTII
CCCEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
AGYPWFTDWGRDTMISLPGLTIPTRRPEVAAAVLRTFARFVDQGMLPNRFPDEGVAPEYN
EECCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
TADATLWFFEAIRAHHAAFGDDDLITELFPLLEEIIDWHIRGTRDGIGLDRGDSLLRAGT
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCC
ATTQLTWMDVRVRGWVVTPRSGKPVEINALWYNALQSMAAFARHLGKADERYTTMAAATK
CCEEEEEEEEEEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
AGFNRFWYADGHYLYDVIDGPDGVDPTLRPNQIIAVSLPYSPLDRQRQEAVVQACARSLL
HCCCEEEEECCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH
TGVGLRSLTPDHPDYAPRYTGSLLARDAAYHQGTVWAWLIGPFASAWYRITRDRDATRRL
HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHEEECCCCHHHHHH
LLPLIDHLVDGCVGTISEIFDGDPPHQPRGCFAQAWSVAEVLRVWYEVEDRGEEIEDRR
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA