Click here to switch to the map view.

The map label for this gene is grm [H]

Identifier: 222526316

GI number: 222526316

Start: 3800740

End: 3801540

Strand: Direct

Name: grm [H]

Synonym: Chy400_3082

Alternate gene names: 222526316

Gene position: 3800740-3801540 (Clockwise)

Preceding gene: 222526315

Following gene: 222526319

Centisome position: 72.13

GC content: 57.18

Gene sequence:

>801_bases
ATGACTAATTGTGAGACGCAACTGGCTGAATTGGTAGCAGCAGTTCAAACCAGCGCACGTTACCGAACGATTGATCGGCA
ACTGGTCGAGCGTGTCGGTCGGGAAGCACTGTCTCGCTATCCATCGCTGAAAGCTGCGATCAAGGCCACCAAGAGCCAGT
TACACCAGATGATCGGGGCCTATGCCGAACGAACCCCACCGTATGATCAGTGGCTCGCCGAACTGCAACAGGCACCGGAT
GTTGCTTCACGTAAGGTCATTTGTCAACGGTTGCTGGCCTCGCATGCCTCAACCCGTGAGCGCCTGGCAGTGCTTGATCG
GCTCTACCCTGCCTGTCTCGGTGATCAACCGCCGCAGCGTATCCTTGATCTGGGATGCGGTTTCAATCCGTTAGCGGTGC
CCTGGATGAATGTGCCTGCTACCACCTTTTATGCCGCGTATGACATTGATACTGCCCTCTGTTCATTTGTAGGCGCAGTA
CTGCCTTTGCTGGGTGTGCAGGGTAGCGCCGATGTTTGTGATCTGGTGACAGGGCCGCCGCCAGTTGCCGCAGACGTTGC
GCTGGTACTGAAAGTAATTCCCTTGCTGGAACAACAACGACGCGGCGCCGGGGCCGATCTGTTGCGCGCTATTCAGGCGC
CGCGCCTGGTAGTGTCCTTTCCGACGCGCAGTCTGGGTGGGCGGAATGTAGGGATGCTCGAAACGTATCGCCGCTATATG
ACAACGCTTGCCGCGACGGAAGGCTGGTCACCGCACGAGATAGTCTTACCCGGTGAGCTGGTCTTTATCATTCGTCGCTA
G

Upstream 100 bases:

>100_bases
GGTGAGACGCTGGTCTTGCGATTGGCAACCATCCACAATCTCCACTTCATGGCGCAGTTGATGGAGCTGATCCGGCACGA
ACGGAGAGGATCGCAAGCTA

Downstream 100 bases:

>100_bases
TTTGTGATCAGCCTTCGCGTTCGTAGATGCAGATAACGGTGCCATCATGCGCTGGATTGGTGGTCTTGCCCGCTCTTCAT
GCGCGTGTTGCCAGTTTGGA

Product: ribosomal RNA methyltransferase

Products: NA

Alternate protein names: Gentamicin-resistance methyltransferase [H]

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MTNCETQLAELVAAVQTSARYRTIDRQLVERVGREALSRYPSLKAAIKATKSQLHQMIGAYAERTPPYDQWLAELQQAPD
VASRKVICQRLLASHASTRERLAVLDRLYPACLGDQPPQRILDLGCGFNPLAVPWMNVPATTFYAAYDIDTALCSFVGAV
LPLLGVQGSADVCDLVTGPPPVAADVALVLKVIPLLEQQRRGAGADLLRAIQAPRLVVSFPTRSLGGRNVGMLETYRRYM
TTLAATEGWSPHEIVLPGELVFIIRR

Sequences:

>Translated_266_residues
MTNCETQLAELVAAVQTSARYRTIDRQLVERVGREALSRYPSLKAAIKATKSQLHQMIGAYAERTPPYDQWLAELQQAPD
VASRKVICQRLLASHASTRERLAVLDRLYPACLGDQPPQRILDLGCGFNPLAVPWMNVPATTFYAAYDIDTALCSFVGAV
LPLLGVQGSADVCDLVTGPPPVAADVALVLKVIPLLEQQRRGAGADLLRAIQAPRLVVSFPTRSLGGRNVGMLETYRRYM
TTLAATEGWSPHEIVLPGELVFIIRR
>Mature_265_residues
TNCETQLAELVAAVQTSARYRTIDRQLVERVGREALSRYPSLKAAIKATKSQLHQMIGAYAERTPPYDQWLAELQQAPDV
ASRKVICQRLLASHASTRERLAVLDRLYPACLGDQPPQRILDLGCGFNPLAVPWMNVPATTFYAAYDIDTALCSFVGAVL
PLLGVQGSADVCDLVTGPPPVAADVALVLKVIPLLEQQRRGAGADLLRAIQAPRLVVSFPTRSLGGRNVGMLETYRRYMT
TLAATEGWSPHEIVLPGELVFIIRR

Specific function: Acts on a single G residue of 16S rRNA, and is included in the mechanism of resistance to aminoglycoside antibiotics [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010769 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29148; Mature: 29017

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNCETQLAELVAAVQTSARYRTIDRQLVERVGREALSRYPSLKAAIKATKSQLHQMIGA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
YAERTPPYDQWLAELQQAPDVASRKVICQRLLASHASTRERLAVLDRLYPACLGDQPPQR
HHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ILDLGCGFNPLAVPWMNVPATTFYAAYDIDTALCSFVGAVLPLLGVQGSADVCDLVTGPP
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCC
PVAADVALVLKVIPLLEQQRRGAGADLLRAIQAPRLVVSFPTRSLGGRNVGMLETYRRYM
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHH
TTLAATEGWSPHEIVLPGELVFIIRR
HHHHHCCCCCCCEEEECCEEEEEEEC
>Mature Secondary Structure 
TNCETQLAELVAAVQTSARYRTIDRQLVERVGREALSRYPSLKAAIKATKSQLHQMIGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
YAERTPPYDQWLAELQQAPDVASRKVICQRLLASHASTRERLAVLDRLYPACLGDQPPQR
HHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ILDLGCGFNPLAVPWMNVPATTFYAAYDIDTALCSFVGAVLPLLGVQGSADVCDLVTGPP
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCC
PVAADVALVLKVIPLLEQQRRGAGADLLRAIQAPRLVVSFPTRSLGGRNVGMLETYRRYM
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHH
TTLAATEGWSPHEIVLPGELVFIIRR
HHHHHCCCCCCCEEEECCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013410 [H]