| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is tgt [H]
Identifier: 222526315
GI number: 222526315
Start: 3799635
End: 3800747
Strand: Direct
Name: tgt [H]
Synonym: Chy400_3081
Alternate gene names: 222526315
Gene position: 3799635-3800747 (Clockwise)
Preceding gene: 222526313
Following gene: 222526316
Centisome position: 72.11
GC content: 56.24
Gene sequence:
>1113_bases ATGACGGACTTCTTGACTCTTCAGCATGGCCAGTTATCCTTACCGACATTTTTGCCCGATGCAACCTTTGGCACGGTGCG CGCAGTTGATAGCCGTGATCTCAGCGAAGCCGGTATCAGAGCGTTGGTCATGAATGTCTTTCATCTCATGCAACGTCCCG GTAGTTCGACGATCACCGCCTTAGGAGGGTTGCACCAGATGACAGCCTGGTCGGGGCCAATTGTGACCGATAGCGGTGGT TTTCAAGCCTATTCGCTGATCCGAAATAATTCCAAACAGGGTCGGATTACCGATCAGGGGTTAACCTTTCAACCAGAGGG GGCTGAACGGCGGTTTCAACTGACGCCGGAGAAGAGCATTCAACTGCAATTGAGCTATGGCGCTGATATCGTCATTTGCC TTGACGATTGCACACACGTTGACGACCCACCTGCCGAACAGCGCCGTTCGGTTGAACGGACGATTCGCTGGGCCCGTCGC TGTCGGCAGGAATTTGATCGTCAGGTAGCACAGCGCCGACGCCAGGGTCCGCCACCATTGCTCTTTGCTGTGGTACAGGG TGGGGGCGATCTGCATTTGCGCGCCGAGTGTGCAGCCGCACTTCTCGACATTGGGTTCGACGGATTCGGGTTTGGGGGAT GGCCGCTCGATGCCCAGGGCCAACTTCTCGATGAGGTGCTGGCGTTCACCCGTGATCAAATTCCCGCTCGCTTTCCTATG CACGCGCTGGGGGTTGGACACCCGGCCAGTGTAGTGGCCTGTGCCCGGATGGGTTACGACATCTTCGATAGTGCATTACC GACCCGCGATGCTCGTCAGGGGCGTCTGCTGGCGTTTACGGCTGATCCGCAGCGACCGGGCTTCCAATTGCGCGGTGATT GGTTTACCTATGTTTATCTGGCCGACCGCAAGCATGTGAAAGCTGATACACCAATCTCGCCGGGATGCCAGTGCTTTACC TGTAGCCGGTACAGTCTGGGGTATTTGCATCATCTGCACAAACTGGGTGAGACGCTGGTCTTGCGATTGGCAACCATCCA CAATCTCCACTTCATGGCGCAGTTGATGGAGCTGATCCGGCACGAACGGAGAGGATCGCAAGCTAATGACTAA
Upstream 100 bases:
>100_bases GACACAAACAGGAATCAAATATTGCGACTTCTGCGATAGTATAGCGCACGATTTACCAAATTTCAACCCTCGAATGTCTA TATAATTGTTGGGATGGTAT
Downstream 100 bases:
>100_bases TTGTGAGACGCAACTGGCTGAATTGGTAGCAGCAGTTCAAACCAGCGCACGTTACCGAACGATTGATCGGCAACTGGTCG AGCGTGTCGGTCGGGAAGCA
Product: tRNA-guanine transglycosylase
Products: NA
Alternate protein names: Guanine insertion enzyme; tRNA-guanine transglycosylase [H]
Number of amino acids: Translated: 370; Mature: 369
Protein sequence:
>370_residues MTDFLTLQHGQLSLPTFLPDATFGTVRAVDSRDLSEAGIRALVMNVFHLMQRPGSSTITALGGLHQMTAWSGPIVTDSGG FQAYSLIRNNSKQGRITDQGLTFQPEGAERRFQLTPEKSIQLQLSYGADIVICLDDCTHVDDPPAEQRRSVERTIRWARR CRQEFDRQVAQRRRQGPPPLLFAVVQGGGDLHLRAECAAALLDIGFDGFGFGGWPLDAQGQLLDEVLAFTRDQIPARFPM HALGVGHPASVVACARMGYDIFDSALPTRDARQGRLLAFTADPQRPGFQLRGDWFTYVYLADRKHVKADTPISPGCQCFT CSRYSLGYLHHLHKLGETLVLRLATIHNLHFMAQLMELIRHERRGSQAND
Sequences:
>Translated_370_residues MTDFLTLQHGQLSLPTFLPDATFGTVRAVDSRDLSEAGIRALVMNVFHLMQRPGSSTITALGGLHQMTAWSGPIVTDSGG FQAYSLIRNNSKQGRITDQGLTFQPEGAERRFQLTPEKSIQLQLSYGADIVICLDDCTHVDDPPAEQRRSVERTIRWARR CRQEFDRQVAQRRRQGPPPLLFAVVQGGGDLHLRAECAAALLDIGFDGFGFGGWPLDAQGQLLDEVLAFTRDQIPARFPM HALGVGHPASVVACARMGYDIFDSALPTRDARQGRLLAFTADPQRPGFQLRGDWFTYVYLADRKHVKADTPISPGCQCFT CSRYSLGYLHHLHKLGETLVLRLATIHNLHFMAQLMELIRHERRGSQAND >Mature_369_residues TDFLTLQHGQLSLPTFLPDATFGTVRAVDSRDLSEAGIRALVMNVFHLMQRPGSSTITALGGLHQMTAWSGPIVTDSGGF QAYSLIRNNSKQGRITDQGLTFQPEGAERRFQLTPEKSIQLQLSYGADIVICLDDCTHVDDPPAEQRRSVERTIRWARRC RQEFDRQVAQRRRQGPPPLLFAVVQGGGDLHLRAECAAALLDIGFDGFGFGGWPLDAQGQLLDEVLAFTRDQIPARFPMH ALGVGHPASVVACARMGYDIFDSALPTRDARQGRLLAFTADPQRPGFQLRGDWFTYVYLADRKHVKADTPISPGCQCFTC SRYSLGYLHHLHKLGETLVLRLATIHNLHFMAQLMELIRHERRGSQAND
Specific function: Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hyper
COG id: COG0343
COG function: function code J; Queuine/archaeosine tRNA-ribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the queuine tRNA-ribosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI13654276, Length=358, Percent_Identity=33.2402234636872, Blast_Score=188, Evalue=6e-48, Organism=Escherichia coli, GI1786607, Length=358, Percent_Identity=36.5921787709497, Blast_Score=228, Evalue=5e-61, Organism=Caenorhabditis elegans, GI17544680, Length=366, Percent_Identity=33.0601092896175, Blast_Score=189, Evalue=2e-48, Organism=Drosophila melanogaster, GI19920510, Length=360, Percent_Identity=32.5, Blast_Score=192, Evalue=2e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004803 - InterPro: IPR002616 [H]
Pfam domain/function: PF01702 TGT [H]
EC number: =2.4.2.29 [H]
Molecular weight: Translated: 41236; Mature: 41104
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDFLTLQHGQLSLPTFLPDATFGTVRAVDSRDLSEAGIRALVMNVFHLMQRPGSSTITA CCCEEEECCCCEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH LGGLHQMTAWSGPIVTDSGGFQAYSLIRNNSKQGRITDQGLTFQPEGAERRFQLTPEKSI HCCHHHHHCCCCCEEECCCCCEEHHHHHCCCCCCCEECCCCEECCCCCCCEEEECCCCCE QLQLSYGADIVICLDDCTHVDDPPAEQRRSVERTIRWARRCRQEFDRQVAQRRRQGPPPL EEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE LFAVVQGGGDLHLRAECAAALLDIGFDGFGFGGWPLDAQGQLLDEVLAFTRDQIPARFPM EEEEEECCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCH HALGVGHPASVVACARMGYDIFDSALPTRDARQGRLLAFTADPQRPGFQLRGDWFTYVYL HHHCCCCHHHHHHHHHHCHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEECCCEEEEEEE ADRKHVKADTPISPGCQCFTCSRYSLGYLHHLHKLGETLVLRLATIHNLHFMAQLMELIR ECCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HERRGSQAND HHHCCCCCCC >Mature Secondary Structure TDFLTLQHGQLSLPTFLPDATFGTVRAVDSRDLSEAGIRALVMNVFHLMQRPGSSTITA CCEEEECCCCEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH LGGLHQMTAWSGPIVTDSGGFQAYSLIRNNSKQGRITDQGLTFQPEGAERRFQLTPEKSI HCCHHHHHCCCCCEEECCCCCEEHHHHHCCCCCCCEECCCCEECCCCCCCEEEECCCCCE QLQLSYGADIVICLDDCTHVDDPPAEQRRSVERTIRWARRCRQEFDRQVAQRRRQGPPPL EEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE LFAVVQGGGDLHLRAECAAALLDIGFDGFGFGGWPLDAQGQLLDEVLAFTRDQIPARFPM EEEEEECCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCH HALGVGHPASVVACARMGYDIFDSALPTRDARQGRLLAFTADPQRPGFQLRGDWFTYVYL HHHCCCCHHHHHHHHHHCHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEECCCEEEEEEE ADRKHVKADTPISPGCQCFTCSRYSLGYLHHLHKLGETLVLRLATIHNLHFMAQLMELIR ECCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HERRGSQAND HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA